Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 RNU6-462P-201ENST00000362659 105 ntBASIC4.02□□□□□ -1.77
PCNAP12004 Y_RNA.318-201ENST00000365131 97 ntBASIC4.02□□□□□ -1.77
PCNAP12004 MIR153-1-201ENST00000384914 90 ntBASIC4.02□□□□□ -1.77
PCNAP12004 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
PCNAP12004 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.02□□□□□ -1.77
PCNAP12004 HMGB1P17-201ENST00000403495 628 ntBASIC4.02□□□□□ -1.77
PCNAP12004 RPL31P2-201ENST00000413849 377 ntBASIC4.02□□□□□ -1.77
PCNAP12004 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.02□□□□□ -1.77
PCNAP12004 RPL23AP39-201ENST00000415533 405 ntBASIC4.02□□□□□ -1.77
PCNAP12004 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.02□□□□□ -1.77
PCNAP12004 AC083875.1-201ENST00000419509 405 ntBASIC4.02□□□□□ -1.77
PCNAP12004 GLRXP1-201ENST00000423261 334 ntBASIC4.02□□□□□ -1.77
PCNAP12004 AL049610.1-201ENST00000423374 372 ntBASIC4.02□□□□□ -1.77
PCNAP12004 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.02□□□□□ -1.77
PCNAP12004 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.02□□□□□ -1.77
PCNAP12004 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.02□□□□□ -1.77
PCNAP12004 AC129850.1-201ENST00000436203 508 ntBASIC4.02□□□□□ -1.77
PCNAP12004 UBE2FP3-201ENST00000436366 524 ntBASIC4.02□□□□□ -1.77
PCNAP12004 MTCO2P16-201ENST00000436962 677 ntBASIC4.02□□□□□ -1.77
PCNAP12004 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.02□□□□□ -1.77
PCNAP12004 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC4.02□□□□□ -1.77
PCNAP12004 AP000936.2-201ENST00000447151 681 ntBASIC4.02□□□□□ -1.77
PCNAP12004 PPIAP3-201ENST00000450588 505 ntBASIC4.02□□□□□ -1.77
PCNAP12004 RPL31P3-201ENST00000458430 332 ntBASIC4.02□□□□□ -1.77
PCNAP12004 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.02□□□□□ -1.77
PCNAP12004 AC006463.2-201ENST00000473326 348 ntBASIC4.02□□□□□ -1.77
PCNAP12004 AC006517.1-201ENST00000480485 328 ntBASIC4.02□□□□□ -1.77
PCNAP12004 HMGB1P36-201ENST00000487709 576 ntBASIC4.02□□□□□ -1.77
PCNAP12004 AC090453.1-201ENST00000495560 436 ntBASIC4.02□□□□□ -1.77
PCNAP12004 OR2A20P-203ENST00000498397 1268 ntBASIC4.02□□□□□ -1.77
PCNAP12004 BNIP3P41-201ENST00000503774 571 ntBASIC4.02□□□□□ -1.77
PCNAP12004 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC4.02□□□□□ -1.77
PCNAP12004 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.02□□□□□ -1.77
PCNAP12004 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.02□□□□□ -1.77
PCNAP12004 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.02□□□□□ -1.77
PCNAP12004 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC4.02□□□□□ -1.77
PCNAP12004 AC105233.3-201ENST00000531125 744 ntBASIC4.02□□□□□ -1.77
PCNAP12004 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC4.02□□□□□ -1.77
PCNAP12004 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.02□□□□□ -1.77
PCNAP12004 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
PCNAP12004 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC4.02□□□□□ -1.77
PCNAP12004 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.02□□□□□ -1.77
PCNAP12004 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.02□□□□□ -1.77
PCNAP12004 AC136618.2-201ENST00000575091 400 ntBASIC4.02□□□□□ -1.77
PCNAP12004 AC022655.2-201ENST00000577280 318 ntBASIC4.02□□□□□ -1.77
PCNAP12004 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.02□□□□□ -1.77
PCNAP12004 IPO5P1-202ENST00000600039 287 ntBASIC4.02□□□□□ -1.77
PCNAP12004 LLPHP1-201ENST00000603571 367 ntBASIC4.02□□□□□ -1.77
PCNAP12004 RNU6-88P-201ENST00000606801 100 ntBASIC4.02□□□□□ -1.77
PCNAP12004 AL031775.1-201ENST00000607014 887 ntBASIC4.02□□□□□ -1.77
PCNAP12004 AC092653.1-201ENST00000608509 531 ntBASIC4.02□□□□□ -1.77
PCNAP12004 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.02□□□□□ -1.77
PCNAP12004 AC008785.1-201ENST00000624475 456 ntBASIC4.02□□□□□ -1.77
PCNAP12004 MIR4496-201ENST00000635896 61 ntBASIC4.02□□□□□ -1.77
PCNAP12004 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCNAP12004 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
PCNAP12004 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCNAP12004 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCNAP12004 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.02□□□□□ -1.77
PCNAP12004 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PCNAP12004 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.02□□□□□ -1.77
PCNAP12004 DDX43P2-201ENST00000604753 1354 ntBASIC4.02□□□□□ -1.77
PCNAP12004 LINC00561-201ENST00000565815 2738 ntBASIC4.01□□□□□ -1.77
PCNAP12004 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
PCNAP12004 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
PCNAP12004 GDI2P1-201ENST00000429312 1336 ntBASIC4.01□□□□□ -1.77
PCNAP12004 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
PCNAP12004 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.01□□□□□ -1.77
PCNAP12004 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
PCNAP12004 AL672167.1-206ENST00000356293 943 ntBASIC4.01□□□□□ -1.77
PCNAP12004 RNVU1-3-201ENST00000364313 161 ntBASIC4.01□□□□□ -1.77
PCNAP12004 RNU6-730P-201ENST00000383954 104 ntBASIC4.01□□□□□ -1.77
PCNAP12004 SNORA70E-201ENST00000384492 135 ntBASIC4.01□□□□□ -1.77
PCNAP12004 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
PCNAP12004 RNU4-25P-201ENST00000410569 230 ntBASIC4.01□□□□□ -1.77
PCNAP12004 RN7SKP182-201ENST00000410772 298 ntBASIC4.01□□□□□ -1.77
PCNAP12004 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.01□□□□□ -1.77
PCNAP12004 TPMTP2-201ENST00000414372 726 ntBASIC4.01□□□□□ -1.77
PCNAP12004 COX6B1P7-201ENST00000430845 235 ntBASIC4.01□□□□□ -1.77
PCNAP12004 LSM1P1-201ENST00000438629 273 ntBASIC4.01□□□□□ -1.77
PCNAP12004 MTND5P14-201ENST00000441481 1267 ntBASIC4.01□□□□□ -1.77
PCNAP12004 TAF9P1-201ENST00000445421 515 ntBASIC4.01□□□□□ -1.77
PCNAP12004 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.01□□□□□ -1.77
PCNAP12004 RPL36AP33-201ENST00000450395 310 ntBASIC4.01□□□□□ -1.77
PCNAP12004 AC009963.2-201ENST00000453431 138 ntBASIC4.01□□□□□ -1.77
PCNAP12004 TAF9P2-201ENST00000454958 515 ntBASIC4.01□□□□□ -1.77
PCNAP12004 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PCNAP12004 AC109327.1-201ENST00000471666 403 ntBASIC4.01□□□□□ -1.77
PCNAP12004 AC068724.1-201ENST00000487100 792 ntBASIC4.01□□□□□ -1.77
PCNAP12004 DSTNP2-201ENST00000504533 515 ntBASIC4.01□□□□□ -1.77
PCNAP12004 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.01□□□□□ -1.77
PCNAP12004 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PCNAP12004 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.01□□□□□ -1.77
PCNAP12004 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PCNAP12004 AC024224.1-201ENST00000538284 609 ntBASIC4.01□□□□□ -1.77
PCNAP12004 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PCNAP12004 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PCNAP12004 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.01□□□□□ -1.77
PCNAP12004 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC4.01□□□□□ -1.77
PCNAP12004 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms