Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RETP07949 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
RETP07949 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RETP07949 METTL21EP-201ENST00000298105 713 ntBASIC3.29□□□□□ -1.88
RETP07949 DYNLT3P1-201ENST00000378574 347 ntBASIC3.29□□□□□ -1.88
RETP07949 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
RETP07949 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RETP07949 AL445529.1-201ENST00000398713 389 ntBASIC3.29□□□□□ -1.88
RETP07949 HNRNPDP2-201ENST00000406475 478 ntBASIC3.29□□□□□ -1.88
RETP07949 RNA5SP293-201ENST00000410527 113 ntBASIC3.29□□□□□ -1.88
RETP07949 RNA5SP107-201ENST00000411358 122 ntBASIC3.29□□□□□ -1.88
RETP07949 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.29□□□□□ -1.88
RETP07949 AL139281.1-201ENST00000422120 335 ntBASIC3.29□□□□□ -1.88
RETP07949 GTF2IP23-201ENST00000423746 351 ntBASIC3.29□□□□□ -1.88
RETP07949 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.29□□□□□ -1.88
RETP07949 RPL23AP22-201ENST00000437556 453 ntBASIC3.29□□□□□ -1.88
RETP07949 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.29□□□□□ -1.88
RETP07949 AL353718.1-201ENST00000451028 517 ntBASIC3.29□□□□□ -1.88
RETP07949 AC104308.1-201ENST00000454621 333 ntBASIC3.29□□□□□ -1.88
RETP07949 RPS15AP1-201ENST00000457423 391 ntBASIC3.29□□□□□ -1.88
RETP07949 HMGN1P18-201ENST00000457642 277 ntBASIC3.29□□□□□ -1.88
RETP07949 RN7SL863P-201ENST00000462370 296 ntBASIC3.29□□□□□ -1.88
RETP07949 AC021146.5-201ENST00000503544 545 ntBASIC3.29□□□□□ -1.88
RETP07949 POU5F1P7-201ENST00000508759 541 ntBASIC3.29□□□□□ -1.88
RETP07949 TXNP6-201ENST00000510190 310 ntBASIC3.29□□□□□ -1.88
RETP07949 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.29□□□□□ -1.88
RETP07949 RNU6-1102P-201ENST00000516149 96 ntBASIC3.29□□□□□ -1.88
RETP07949 AC107934.2-201ENST00000518653 310 ntBASIC3.29□□□□□ -1.88
RETP07949 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.29□□□□□ -1.88
RETP07949 AC139103.1-201ENST00000534696 1030 ntBASIC3.29□□□□□ -1.88
RETP07949 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.29□□□□□ -1.88
RETP07949 H3F3AP1-201ENST00000559984 334 ntBASIC3.29□□□□□ -1.88
RETP07949 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.29□□□□□ -1.88
RETP07949 AC090751.1-201ENST00000566966 267 ntBASIC3.29□□□□□ -1.88
RETP07949 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.29□□□□□ -1.88
RETP07949 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.29□□□□□ -1.88
RETP07949 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.29□□□□□ -1.88
RETP07949 AC012254.4-201ENST00000588843 273 ntBASIC3.29□□□□□ -1.88
RETP07949 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC3.29□□□□□ -1.88
RETP07949 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.29□□□□□ -1.88
RETP07949 ATP5A1P2-202ENST00000616464 443 ntBASIC3.29□□□□□ -1.88
RETP07949 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.29□□□□□ -1.88
RETP07949 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.29□□□□□ -1.88
RETP07949 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RETP07949 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RETP07949 AC004925.1-201ENST00000624256 2706 ntBASIC3.28□□□□□ -1.88
RETP07949 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RETP07949 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.28□□□□□ -1.88
RETP07949 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RETP07949 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RETP07949 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.28□□□□□ -1.88
RETP07949 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
RETP07949 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RETP07949 AL354719.1-201ENST00000406535 843 ntBASIC3.28□□□□□ -1.88
RETP07949 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.28□□□□□ -1.88
RETP07949 RPL7P46-201ENST00000425129 740 ntBASIC3.28□□□□□ -1.88
RETP07949 BX890604.2-201ENST00000427883 474 ntBASIC3.28□□□□□ -1.88
RETP07949 RPL17P35-201ENST00000432217 549 ntBASIC3.28□□□□□ -1.88
RETP07949 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.28□□□□□ -1.88
RETP07949 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.28□□□□□ -1.88
RETP07949 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.28□□□□□ -1.88
RETP07949 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC3.28□□□□□ -1.88
RETP07949 AC093392.2-201ENST00000450682 337 ntBASIC3.28□□□□□ -1.88
RETP07949 SSXP4-201ENST00000451349 245 ntBASIC3.28□□□□□ -1.88
RETP07949 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.28□□□□□ -1.88
RETP07949 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.28□□□□□ -1.88
RETP07949 AC108860.1-201ENST00000484521 383 ntBASIC3.28□□□□□ -1.88
RETP07949 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.28□□□□□ -1.88
RETP07949 VN1R104P-201ENST00000505115 1009 ntBASIC3.28□□□□□ -1.88
RETP07949 AC112198.1-201ENST00000505369 1220 ntBASIC3.28□□□□□ -1.88
RETP07949 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.28□□□□□ -1.88
RETP07949 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.28□□□□□ -1.88
RETP07949 AF279873.1-201ENST00000523393 313 ntBASIC3.28□□□□□ -1.88
RETP07949 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.28□□□□□ -1.88
RETP07949 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.28□□□□□ -1.88
RETP07949 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.28□□□□□ -1.88
RETP07949 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.28□□□□□ -1.88
RETP07949 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
RETP07949 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.89
RETP07949 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.28□□□□□ -1.89
RETP07949 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.27□□□□□ -1.89
RETP07949 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.27□□□□□ -1.89
RETP07949 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.27□□□□□ -1.89
RETP07949 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RETP07949 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
RETP07949 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
RETP07949 Y_RNA.110-201ENST00000363220 99 ntBASIC3.27□□□□□ -1.89
RETP07949 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
RETP07949 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.27□□□□□ -1.89
RETP07949 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.27□□□□□ -1.89
RETP07949 AC245291.1-201ENST00000419501 328 ntBASIC3.27□□□□□ -1.89
RETP07949 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RETP07949 RPL21P40-201ENST00000428586 483 ntBASIC3.27□□□□□ -1.89
RETP07949 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.27□□□□□ -1.89
RETP07949 AC005189.1-201ENST00000431286 310 ntBASIC3.27□□□□□ -1.89
RETP07949 B3GNT2P1-201ENST00000434960 952 ntBASIC3.27□□□□□ -1.89
RETP07949 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.27□□□□□ -1.89
RETP07949 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.27□□□□□ -1.89
RETP07949 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.27□□□□□ -1.89
RETP07949 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms