Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC006548.1-201ENST00000427470 102 ntBASIC2.54□□□□□ -2
HLA-DQA1P01909 AC093155.1-201ENST00000440164 826 ntBASIC2.54□□□□□ -2
HLA-DQA1P01909 MTCYBP42-201ENST00000444653 1130 ntBASIC2.54□□□□□ -2
HLA-DQA1P01909 AC115115.1-201ENST00000449927 248 ntBASIC2.54□□□□□ -2
HLA-DQA1P01909 NUTF2P7-201ENST00000453086 375 ntBASIC2.54□□□□□ -2
HLA-DQA1P01909 TRBV26-201ENST00000456572 344 ntBASIC2.54□□□□□ -2
HLA-DQA1P01909 PLGLA-201ENST00000465668 449 ntBASIC2.54□□□□□ -2
HLA-DQA1P01909 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC2.54□□□□□ -2
HLA-DQA1P01909 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
HLA-DQA1P01909 ACTR3BP4-201ENST00000503033 1244 ntBASIC2.54□□□□□ -2
HLA-DQA1P01909 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.54□□□□□ -2
HLA-DQA1P01909 AC093752.1-206ENST00000511823 336 ntBASIC2.54□□□□□ -2
HLA-DQA1P01909 SNORA19.3-201ENST00000516165 130 ntBASIC2.54□□□□□ -2
HLA-DQA1P01909 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.54□□□□□ -2
HLA-DQA1P01909 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC2.54□□□□□ -2
HLA-DQA1P01909 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC2.54□□□□□ -2
HLA-DQA1P01909 ARL2BPP5-201ENST00000523141 481 ntBASIC2.54□□□□□ -2
HLA-DQA1P01909 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.54□□□□□ -2
HLA-DQA1P01909 AP004371.1-201ENST00000525240 214 ntBASIC2.54□□□□□ -2
HLA-DQA1P01909 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.54□□□□□ -2
HLA-DQA1P01909 AP003385.6-201ENST00000531603 374 ntBASIC2.54□□□□□ -2
HLA-DQA1P01909 CYCSP30-201ENST00000546447 172 ntBASIC2.54□□□□□ -2
HLA-DQA1P01909 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC2.54□□□□□ -2
HLA-DQA1P01909 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC2.54□□□□□ -2
HLA-DQA1P01909 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.54□□□□□ -2
HLA-DQA1P01909 AC136624.4-201ENST00000573044 370 ntBASIC2.54□□□□□ -2
HLA-DQA1P01909 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC2.54□□□□□ -2
HLA-DQA1P01909 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC2.54□□□□□ -2
HLA-DQA1P01909 MIR3690-201ENST00000580266 75 ntBASIC2.54□□□□□ -2
HLA-DQA1P01909 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.54□□□□□ -2
HLA-DQA1P01909 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC2.54□□□□□ -2
HLA-DQA1P01909 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.54□□□□□ -2
HLA-DQA1P01909 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC2.54□□□□□ -2
HLA-DQA1P01909 VN1R85P-201ENST00000601587 426 ntBASIC2.54□□□□□ -2
HLA-DQA1P01909 XIAPP1-201ENST00000603162 600 ntBASIC2.54□□□□□ -2
HLA-DQA1P01909 AC067959.1-201ENST00000604334 379 ntBASIC2.54□□□□□ -2
HLA-DQA1P01909 AC092954.1-201ENST00000609121 445 ntBASIC2.54□□□□□ -2
HLA-DQA1P01909 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.54□□□□□ -2
HLA-DQA1P01909 AL731566.2-201ENST00000618971 317 ntBASIC2.54□□□□□ -2
HLA-DQA1P01909 MIR6810-201ENST00000622701 70 ntBASIC2.54□□□□□ -2
HLA-DQA1P01909 AC073348.1-201ENST00000623002 331 ntBASIC2.54□□□□□ -2
HLA-DQA1P01909 AC112200.1-201ENST00000625015 234 ntBASIC2.54□□□□□ -2
HLA-DQA1P01909 CR381572.1-201ENST00000625098 102 ntBASIC2.54□□□□□ -2
HLA-DQA1P01909 AL138960.2-201ENST00000625145 535 ntBASIC2.54□□□□□ -2
HLA-DQA1P01909 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC2.54□□□□□ -2
HLA-DQA1P01909 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC2.54□□□□□ -2
HLA-DQA1P01909 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
HLA-DQA1P01909 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
HLA-DQA1P01909 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.53□□□□□ -2
HLA-DQA1P01909 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC2.53□□□□□ -2
HLA-DQA1P01909 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.53□□□□□ -2
HLA-DQA1P01909 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.53□□□□□ -2
HLA-DQA1P01909 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
HLA-DQA1P01909 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.53□□□□□ -2
HLA-DQA1P01909 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.53□□□□□ -2
HLA-DQA1P01909 HMGB1P5-201ENST00000255320 642 ntBASIC2.53□□□□□ -2
HLA-DQA1P01909 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.53□□□□□ -2
HLA-DQA1P01909 RNU6-1066P-201ENST00000363573 105 ntBASIC2.53□□□□□ -2
HLA-DQA1P01909 SNORA7.2-201ENST00000364446 145 ntBASIC2.53□□□□□ -2
HLA-DQA1P01909 SNORD82-201ENST00000365530 70 ntBASIC2.53□□□□□ -2
HLA-DQA1P01909 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.53□□□□□ -2
HLA-DQA1P01909 SNORA51.6-201ENST00000384151 125 ntBASIC2.53□□□□□ -2
HLA-DQA1P01909 MIR30B-201ENST00000384850 88 ntBASIC2.53□□□□□ -2
HLA-DQA1P01909 RNU6-1300P-201ENST00000391046 108 ntBASIC2.53□□□□□ -2
HLA-DQA1P01909 RNU6-1000P-201ENST00000391066 106 ntBASIC2.53□□□□□ -2
HLA-DQA1P01909 AC016769.3-201ENST00000396562 315 ntBASIC2.53□□□□□ -2
HLA-DQA1P01909 MIR887-201ENST00000401258 79 ntBASIC2.53□□□□□ -2
HLA-DQA1P01909 TMSB4XP8-201ENST00000402089 135 ntBASIC2.53□□□□□ -2
HLA-DQA1P01909 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.53□□□□□ -2
HLA-DQA1P01909 AL133384.1-201ENST00000412744 351 ntBASIC2.53□□□□□ -2
HLA-DQA1P01909 TMSB4XP6-201ENST00000415187 135 ntBASIC2.53□□□□□ -2
HLA-DQA1P01909 AC012065.2-201ENST00000421295 375 ntBASIC2.53□□□□□ -2
HLA-DQA1P01909 MTCO3P1-205ENST00000422088 832 ntBASIC2.53□□□□□ -2
HLA-DQA1P01909 HSFY1P1-201ENST00000423928 1178 ntBASIC2.53□□□□□ -2
HLA-DQA1P01909 TMSB4XP1-201ENST00000424567 135 ntBASIC2.53□□□□□ -2
HLA-DQA1P01909 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC2.53□□□□□ -2
HLA-DQA1P01909 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.53□□□□□ -2
HLA-DQA1P01909 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC2.53□□□□□ -2
HLA-DQA1P01909 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.53□□□□□ -2
HLA-DQA1P01909 RPL21P112-201ENST00000434403 463 ntBASIC2.53□□□□□ -2
HLA-DQA1P01909 CST9LP2-201ENST00000437612 320 ntBASIC2.53□□□□□ -2
HLA-DQA1P01909 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC2.53□□□□□ -2
HLA-DQA1P01909 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.53□□□□□ -2
HLA-DQA1P01909 PTGES3P5-201ENST00000455109 434 ntBASIC2.53□□□□□ -2
HLA-DQA1P01909 snoU13.24-201ENST00000458998 104 ntBASIC2.53□□□□□ -2
HLA-DQA1P01909 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC2.53□□□□□ -2
HLA-DQA1P01909 AC108064.1-201ENST00000513791 460 ntBASIC2.53□□□□□ -2
HLA-DQA1P01909 RNU6-1028P-201ENST00000517164 93 ntBASIC2.53□□□□□ -2
HLA-DQA1P01909 RNU6-1073P-201ENST00000517182 106 ntBASIC2.53□□□□□ -2
HLA-DQA1P01909 AP001207.2-201ENST00000519490 539 ntBASIC2.53□□□□□ -2
HLA-DQA1P01909 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.53□□□□□ -2
HLA-DQA1P01909 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC2.53□□□□□ -2
HLA-DQA1P01909 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC2.53□□□□□ -2
HLA-DQA1P01909 MIR5685-201ENST00000579080 79 ntBASIC2.53□□□□□ -2
HLA-DQA1P01909 MIR5708-201ENST00000579723 85 ntBASIC2.53□□□□□ -2
HLA-DQA1P01909 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.53□□□□□ -2
HLA-DQA1P01909 AL020997.2-201ENST00000602607 184 ntBASIC2.53□□□□□ -2
HLA-DQA1P01909 AL606834.3-201ENST00000602615 496 ntBASIC2.53□□□□□ -2
HLA-DQA1P01909 AC005014.3-201ENST00000605985 190 ntBASIC2.53□□□□□ -2
HLA-DQA1P01909 AL391497.1-201ENST00000608671 547 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms