Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.45□□□□□ -1.7
DDX58O95786 AC023813.2-201ENST00000564321 469 ntBASIC4.45□□□□□ -1.7
DDX58O95786 AGGF1P5-201ENST00000567900 919 ntBASIC4.45□□□□□ -1.7
DDX58O95786 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.45□□□□□ -1.7
DDX58O95786 AC016877.3-201ENST00000606778 504 ntBASIC4.45□□□□□ -1.7
DDX58O95786 AC034229.4-201ENST00000607861 441 ntBASIC4.45□□□□□ -1.7
DDX58O95786 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
DDX58O95786 AC078899.5-201ENST00000612475 178 ntBASIC4.45□□□□□ -1.7
DDX58O95786 AC008083.4-201ENST00000615076 444 ntBASIC4.45□□□□□ -1.7
DDX58O95786 RMST_9.1-201ENST00000619945 193 ntBASIC4.45□□□□□ -1.7
DDX58O95786 AP001002.2-201ENST00000625137 386 ntBASIC4.45□□□□□ -1.7
DDX58O95786 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
DDX58O95786 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.45□□□□□ -1.7
DDX58O95786 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
DDX58O95786 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
DDX58O95786 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.45□□□□□ -1.7
DDX58O95786 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.44□□□□□ -1.7
DDX58O95786 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.44□□□□□ -1.7
DDX58O95786 AC006504.1-201ENST00000562493 3666 ntBASIC4.44□□□□□ -1.7
DDX58O95786 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
DDX58O95786 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
DDX58O95786 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
DDX58O95786 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
DDX58O95786 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
DDX58O95786 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
DDX58O95786 RNU1-33P-201ENST00000364249 162 ntBASIC4.44□□□□□ -1.7
DDX58O95786 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
DDX58O95786 RNU6-761P-201ENST00000384148 107 ntBASIC4.44□□□□□ -1.7
DDX58O95786 RNU6-339P-201ENST00000384310 107 ntBASIC4.44□□□□□ -1.7
DDX58O95786 MIR23A-201ENST00000385245 73 ntBASIC4.44□□□□□ -1.7
DDX58O95786 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.44□□□□□ -1.7
DDX58O95786 MTND4LP20-201ENST00000402379 270 ntBASIC4.44□□□□□ -1.7
DDX58O95786 RN7SKP111-201ENST00000410349 271 ntBASIC4.44□□□□□ -1.7
DDX58O95786 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC4.44□□□□□ -1.7
DDX58O95786 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.44□□□□□ -1.7
DDX58O95786 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.44□□□□□ -1.7
DDX58O95786 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.44□□□□□ -1.7
DDX58O95786 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.44□□□□□ -1.7
DDX58O95786 AC127537.2-201ENST00000439258 465 ntBASIC4.44□□□□□ -1.7
DDX58O95786 HMGN2P21-201ENST00000447764 270 ntBASIC4.44□□□□□ -1.7
DDX58O95786 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.44□□□□□ -1.7
DDX58O95786 AC108729.1-201ENST00000487812 947 ntBASIC4.44□□□□□ -1.7
DDX58O95786 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.44□□□□□ -1.7
DDX58O95786 SETP14-201ENST00000497538 873 ntBASIC4.44□□□□□ -1.7
DDX58O95786 FTH1P9-201ENST00000513251 355 ntBASIC4.44□□□□□ -1.7
DDX58O95786 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.44□□□□□ -1.7
DDX58O95786 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.44□□□□□ -1.7
DDX58O95786 NCAPGP2-201ENST00000557911 754 ntBASIC4.44□□□□□ -1.7
DDX58O95786 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.44□□□□□ -1.7
DDX58O95786 AL360157.1-201ENST00000565962 87 ntBASIC4.44□□□□□ -1.7
DDX58O95786 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.44□□□□□ -1.7
DDX58O95786 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.44□□□□□ -1.7
DDX58O95786 MTND3P19-201ENST00000603825 345 ntBASIC4.44□□□□□ -1.7
DDX58O95786 AL450336.1-201ENST00000605180 586 ntBASIC4.44□□□□□ -1.7
DDX58O95786 OR6C71P-202ENST00000641886 1107 ntBASIC4.44□□□□□ -1.7
DDX58O95786 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
DDX58O95786 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
DDX58O95786 GDI2P1-201ENST00000429312 1336 ntBASIC4.44□□□□□ -1.7
DDX58O95786 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
DDX58O95786 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
DDX58O95786 CDR1-202ENST00000625883 1485 ntBASIC4.43□□□□□ -1.7
DDX58O95786 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
DDX58O95786 SNRPEP2-201ENST00000397592 279 ntBASIC4.43□□□□□ -1.7
DDX58O95786 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
DDX58O95786 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.43□□□□□ -1.7
DDX58O95786 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.43□□□□□ -1.7
DDX58O95786 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.43□□□□□ -1.7
DDX58O95786 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.43□□□□□ -1.7
DDX58O95786 RPL26P28-201ENST00000451325 435 ntBASIC4.43□□□□□ -1.7
DDX58O95786 RFC5P1-201ENST00000454419 874 ntBASIC4.43□□□□□ -1.7
DDX58O95786 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.43□□□□□ -1.7
DDX58O95786 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC4.43□□□□□ -1.7
DDX58O95786 RPL21P10-201ENST00000463521 490 ntBASIC4.43□□□□□ -1.7
DDX58O95786 AP000873.1-201ENST00000463987 400 ntBASIC4.43□□□□□ -1.7
DDX58O95786 MTCO3P35-201ENST00000485582 781 ntBASIC4.43□□□□□ -1.7
DDX58O95786 RPS6P4-201ENST00000494693 758 ntBASIC4.43□□□□□ -1.7
DDX58O95786 AC108078.3-201ENST00000502633 489 ntBASIC4.43□□□□□ -1.7
DDX58O95786 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.43□□□□□ -1.7
DDX58O95786 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.43□□□□□ -1.7
DDX58O95786 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.43□□□□□ -1.7
DDX58O95786 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.43□□□□□ -1.7
DDX58O95786 AADACP1-206ENST00000561502 1193 ntBASIC4.43□□□□□ -1.7
DDX58O95786 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.43□□□□□ -1.7
DDX58O95786 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.43□□□□□ -1.7
DDX58O95786 AL669831.4-202ENST00000590817 238 ntBASIC4.43□□□□□ -1.7
DDX58O95786 AC007179.3-201ENST00000604976 235 ntBASIC4.43□□□□□ -1.7
DDX58O95786 AP001521.1-201ENST00000609150 300 ntBASIC4.43□□□□□ -1.7
DDX58O95786 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.43□□□□□ -1.7
DDX58O95786 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.43□□□□□ -1.7
DDX58O95786 AC090897.3-201ENST00000636973 1157 ntBASIC4.43□□□□□ -1.7
DDX58O95786 OTUD4P1-201ENST00000237841 3067 ntBASIC4.43□□□□□ -1.7
DDX58O95786 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
DDX58O95786 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
DDX58O95786 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.42□□□□□ -1.7
DDX58O95786 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.42□□□□□ -1.7
DDX58O95786 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
DDX58O95786 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
DDX58O95786 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
DDX58O95786 RNU1-18P-201ENST00000363062 164 ntBASIC4.42□□□□□ -1.7
DDX58O95786 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 134.1 ms