Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 AC090772.4-201ENST00000623599 362 ntBASIC4.04□□□□□ -1.76
GGPS1O95749 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.04□□□□□ -1.76
GGPS1O95749 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
GGPS1O95749 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
GGPS1O95749 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
GGPS1O95749 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.03□□□□□ -1.76
GGPS1O95749 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
GGPS1O95749 AL049781.1-201ENST00000623195 3585 ntBASIC4.03□□□□□ -1.76
GGPS1O95749 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
GGPS1O95749 MIR423-201ENST00000362201 94 ntBASIC4.03□□□□□ -1.76
GGPS1O95749 SNORD82-201ENST00000365530 70 ntBASIC4.03□□□□□ -1.76
GGPS1O95749 RPL31P1-201ENST00000398116 372 ntBASIC4.03□□□□□ -1.76
GGPS1O95749 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.03□□□□□ -1.76
GGPS1O95749 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.03□□□□□ -1.76
GGPS1O95749 RHEBP3-201ENST00000411920 351 ntBASIC4.03□□□□□ -1.76
GGPS1O95749 MTATP6P20-201ENST00000414147 562 ntBASIC4.03□□□□□ -1.76
GGPS1O95749 AC106883.1-201ENST00000418805 562 ntBASIC4.03□□□□□ -1.76
GGPS1O95749 CYP4F29P-201ENST00000420685 446 ntBASIC4.03□□□□□ -1.76
GGPS1O95749 GTF2IP23-201ENST00000423746 351 ntBASIC4.03□□□□□ -1.76
GGPS1O95749 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.03□□□□□ -1.76
GGPS1O95749 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.03□□□□□ -1.76
GGPS1O95749 AC097713.2-201ENST00000430199 356 ntBASIC4.03□□□□□ -1.76
GGPS1O95749 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.03□□□□□ -1.76
GGPS1O95749 NANOGP2-201ENST00000435391 727 ntBASIC4.03□□□□□ -1.76
GGPS1O95749 AL138799.3-201ENST00000438968 350 ntBASIC4.03□□□□□ -1.76
GGPS1O95749 AC004854.1-201ENST00000440356 349 ntBASIC4.03□□□□□ -1.76
GGPS1O95749 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.03□□□□□ -1.76
GGPS1O95749 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
GGPS1O95749 RBMY2UP-201ENST00000453474 324 ntBASIC4.03□□□□□ -1.76
GGPS1O95749 RPS4XP10-201ENST00000465034 731 ntBASIC4.03□□□□□ -1.76
GGPS1O95749 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.03□□□□□ -1.76
GGPS1O95749 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.03□□□□□ -1.76
GGPS1O95749 AC125611.1-201ENST00000549563 229 ntBASIC4.03□□□□□ -1.76
GGPS1O95749 AC099489.2-201ENST00000574976 260 ntBASIC4.03□□□□□ -1.76
GGPS1O95749 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.03□□□□□ -1.76
GGPS1O95749 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.03□□□□□ -1.76
GGPS1O95749 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.03□□□□□ -1.76
GGPS1O95749 AC124312.4-201ENST00000605533 310 ntBASIC4.03□□□□□ -1.76
GGPS1O95749 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC4.03□□□□□ -1.76
GGPS1O95749 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.03□□□□□ -1.76
GGPS1O95749 MIR7851-201ENST00000610611 160 ntBASIC4.03□□□□□ -1.76
GGPS1O95749 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.03□□□□□ -1.76
GGPS1O95749 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.03□□□□□ -1.76
GGPS1O95749 U4.6-201ENST00000621618 127 ntBASIC4.03□□□□□ -1.76
GGPS1O95749 AC073348.1-201ENST00000623002 331 ntBASIC4.03□□□□□ -1.76
GGPS1O95749 AL732618.1-201ENST00000623251 301 ntBASIC4.03□□□□□ -1.76
GGPS1O95749 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.03□□□□□ -1.76
GGPS1O95749 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.03□□□□□ -1.76
GGPS1O95749 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.03□□□□□ -1.76
GGPS1O95749 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
GGPS1O95749 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
GGPS1O95749 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
GGPS1O95749 MTND5P1-201ENST00000445440 1375 ntBASIC4.02□□□□□ -1.77
GGPS1O95749 GDI2P1-201ENST00000429312 1336 ntBASIC4.02□□□□□ -1.77
GGPS1O95749 AC107982.1-201ENST00000507171 1300 ntBASIC4.02□□□□□ -1.77
GGPS1O95749 AC109315.1-201ENST00000584143 1347 ntBASIC4.02□□□□□ -1.77
GGPS1O95749 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
GGPS1O95749 SNORA31-201ENST00000362607 130 ntBASIC4.02□□□□□ -1.77
GGPS1O95749 SNORA7.2-201ENST00000364446 145 ntBASIC4.02□□□□□ -1.77
GGPS1O95749 RNA5SP189-201ENST00000364920 115 ntBASIC4.02□□□□□ -1.77
GGPS1O95749 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
GGPS1O95749 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.02□□□□□ -1.77
GGPS1O95749 AL583834.1-201ENST00000406943 343 ntBASIC4.02□□□□□ -1.77
GGPS1O95749 RNU2-42P-201ENST00000410697 113 ntBASIC4.02□□□□□ -1.77
GGPS1O95749 RNU4-78P-201ENST00000410940 126 ntBASIC4.02□□□□□ -1.77
GGPS1O95749 AL161449.1-201ENST00000414531 1199 ntBASIC4.02□□□□□ -1.77
GGPS1O95749 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.02□□□□□ -1.77
GGPS1O95749 RPL26P28-201ENST00000451325 435 ntBASIC4.02□□□□□ -1.77
GGPS1O95749 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.02□□□□□ -1.77
GGPS1O95749 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.02□□□□□ -1.77
GGPS1O95749 AC008155.2-201ENST00000464337 397 ntBASIC4.02□□□□□ -1.77
GGPS1O95749 AC025518.1-201ENST00000479856 347 ntBASIC4.02□□□□□ -1.77
GGPS1O95749 AL358832.1-201ENST00000497800 389 ntBASIC4.02□□□□□ -1.77
GGPS1O95749 HSPD1P15-201ENST00000505573 1122 ntBASIC4.02□□□□□ -1.77
GGPS1O95749 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.02□□□□□ -1.77
GGPS1O95749 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.02□□□□□ -1.77
GGPS1O95749 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.02□□□□□ -1.77
GGPS1O95749 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.02□□□□□ -1.77
GGPS1O95749 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.02□□□□□ -1.77
GGPS1O95749 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.02□□□□□ -1.77
GGPS1O95749 MTCYBP41-201ENST00000528913 1123 ntBASIC4.02□□□□□ -1.77
GGPS1O95749 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.02□□□□□ -1.77
GGPS1O95749 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.02□□□□□ -1.77
GGPS1O95749 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.02□□□□□ -1.77
GGPS1O95749 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.02□□□□□ -1.77
GGPS1O95749 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.02□□□□□ -1.77
GGPS1O95749 AC021749.1-201ENST00000604322 607 ntBASIC4.02□□□□□ -1.77
GGPS1O95749 AL157392.4-201ENST00000609756 345 ntBASIC4.02□□□□□ -1.77
GGPS1O95749 AL355365.1-201ENST00000616480 294 ntBASIC4.02□□□□□ -1.77
GGPS1O95749 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.02□□□□□ -1.77
GGPS1O95749 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.02□□□□□ -1.77
GGPS1O95749 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.02□□□□□ -1.77
GGPS1O95749 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
GGPS1O95749 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
GGPS1O95749 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
GGPS1O95749 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
GGPS1O95749 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
GGPS1O95749 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.02□□□□□ -1.77
GGPS1O95749 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
GGPS1O95749 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms