Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.81□□□□□ -1.64
CDKL5O76039 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDKL5O76039 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CDKL5O76039 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CDKL5O76039 RHOT1P2-201ENST00000366423 333 ntBASIC4.81□□□□□ -1.64
CDKL5O76039 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDKL5O76039 RNU6-1279P-201ENST00000383917 103 ntBASIC4.81□□□□□ -1.64
CDKL5O76039 RNU6-723P-201ENST00000383973 107 ntBASIC4.81□□□□□ -1.64
CDKL5O76039 MIR513A2-201ENST00000385249 127 ntBASIC4.81□□□□□ -1.64
CDKL5O76039 RPS3AP24-201ENST00000407896 734 ntBASIC4.81□□□□□ -1.64
CDKL5O76039 AL450338.1-201ENST00000407987 512 ntBASIC4.81□□□□□ -1.64
CDKL5O76039 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDKL5O76039 RNU2-6P-201ENST00000411404 190 ntBASIC4.81□□□□□ -1.64
CDKL5O76039 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.81□□□□□ -1.64
CDKL5O76039 AC092634.6-201ENST00000418558 192 ntBASIC4.81□□□□□ -1.64
CDKL5O76039 OFD1P18Y-201ENST00000420889 959 ntBASIC4.81□□□□□ -1.64
CDKL5O76039 USP9YP18-201ENST00000425912 695 ntBASIC4.81□□□□□ -1.64
CDKL5O76039 RPS26P47-201ENST00000427219 348 ntBASIC4.81□□□□□ -1.64
CDKL5O76039 ELOCP10-201ENST00000440624 327 ntBASIC4.81□□□□□ -1.64
CDKL5O76039 AL831737.1-201ENST00000441288 271 ntBASIC4.81□□□□□ -1.64
CDKL5O76039 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.81□□□□□ -1.64
CDKL5O76039 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.81□□□□□ -1.64
CDKL5O76039 RPL7P31-201ENST00000450192 724 ntBASIC4.81□□□□□ -1.64
CDKL5O76039 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.81□□□□□ -1.64
CDKL5O76039 AL133244.1-201ENST00000456007 258 ntBASIC4.81□□□□□ -1.64
CDKL5O76039 AL359385.1-201ENST00000456509 365 ntBASIC4.81□□□□□ -1.64
CDKL5O76039 AL121769.1-201ENST00000469473 401 ntBASIC4.81□□□□□ -1.64
CDKL5O76039 AC006463.2-201ENST00000473326 348 ntBASIC4.81□□□□□ -1.64
CDKL5O76039 AC091167.1-201ENST00000492017 396 ntBASIC4.81□□□□□ -1.64
CDKL5O76039 RPL9P6-201ENST00000492764 598 ntBASIC4.81□□□□□ -1.64
CDKL5O76039 AC146944.2-203ENST00000502493 354 ntBASIC4.81□□□□□ -1.64
CDKL5O76039 PRDX4P1-201ENST00000507189 574 ntBASIC4.81□□□□□ -1.64
CDKL5O76039 AC139495.1-202ENST00000513164 354 ntBASIC4.81□□□□□ -1.64
CDKL5O76039 SNORA48.10-201ENST00000516965 160 ntBASIC4.81□□□□□ -1.64
CDKL5O76039 RAB9BP1-201ENST00000519581 626 ntBASIC4.81□□□□□ -1.64
CDKL5O76039 OR4A45P-201ENST00000529954 901 ntBASIC4.81□□□□□ -1.64
CDKL5O76039 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CDKL5O76039 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.81□□□□□ -1.64
CDKL5O76039 AC136618.2-201ENST00000575091 400 ntBASIC4.81□□□□□ -1.64
CDKL5O76039 SNORA59B-202ENST00000578183 701 ntBASIC4.81□□□□□ -1.64
CDKL5O76039 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC4.81□□□□□ -1.64
CDKL5O76039 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC4.81□□□□□ -1.64
CDKL5O76039 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC4.81□□□□□ -1.64
CDKL5O76039 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.81□□□□□ -1.64
CDKL5O76039 ELOCP34-201ENST00000604436 327 ntBASIC4.81□□□□□ -1.64
CDKL5O76039 AL354760.1-201ENST00000608357 643 ntBASIC4.81□□□□□ -1.64
CDKL5O76039 AC004067.1-201ENST00000608733 700 ntBASIC4.81□□□□□ -1.64
CDKL5O76039 AL159169.3-201ENST00000608871 561 ntBASIC4.81□□□□□ -1.64
CDKL5O76039 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.81□□□□□ -1.64
CDKL5O76039 AC007014.2-201ENST00000615581 479 ntBASIC4.81□□□□□ -1.64
CDKL5O76039 AC027807.2-201ENST00000616099 408 ntBASIC4.81□□□□□ -1.64
CDKL5O76039 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.81□□□□□ -1.64
CDKL5O76039 MIR8059-201ENST00000620427 81 ntBASIC4.81□□□□□ -1.64
CDKL5O76039 AC015726.3-201ENST00000624501 418 ntBASIC4.81□□□□□ -1.64
CDKL5O76039 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDKL5O76039 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CDKL5O76039 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDKL5O76039 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CDKL5O76039 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
CDKL5O76039 AL031985.3-201ENST00000565390 2449 ntBASIC4.81□□□□□ -1.64
CDKL5O76039 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.81□□□□□ -1.64
CDKL5O76039 AC116667.1-201ENST00000604855 2072 ntBASIC4.81□□□□□ -1.64
CDKL5O76039 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CDKL5O76039 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.8□□□□□ -1.64
CDKL5O76039 LARP1BP1-201ENST00000506036 1359 ntBASIC4.8□□□□□ -1.64
CDKL5O76039 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CDKL5O76039 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.8□□□□□ -1.64
CDKL5O76039 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CDKL5O76039 AL590290.1-201ENST00000405336 380 ntBASIC4.8□□□□□ -1.64
CDKL5O76039 RNU6-248P-201ENST00000410720 107 ntBASIC4.8□□□□□ -1.64
CDKL5O76039 RNA5SP104-201ENST00000410989 118 ntBASIC4.8□□□□□ -1.64
CDKL5O76039 HMGN1P14-201ENST00000412459 517 ntBASIC4.8□□□□□ -1.64
CDKL5O76039 FCF1P2-201ENST00000415284 583 ntBASIC4.8□□□□□ -1.64
CDKL5O76039 RPL23AP38-201ENST00000423801 469 ntBASIC4.8□□□□□ -1.64
CDKL5O76039 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.8□□□□□ -1.64
CDKL5O76039 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.8□□□□□ -1.64
CDKL5O76039 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.8□□□□□ -1.64
CDKL5O76039 AC098824.1-201ENST00000453565 980 ntBASIC4.8□□□□□ -1.64
CDKL5O76039 SNORD42A-201ENST00000459584 64 ntBASIC4.8□□□□□ -1.64
CDKL5O76039 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.8□□□□□ -1.64
CDKL5O76039 OR4G11P-201ENST00000492842 939 ntBASIC4.8□□□□□ -1.64
CDKL5O76039 AC023424.2-201ENST00000493479 777 ntBASIC4.8□□□□□ -1.64
CDKL5O76039 AC108941.1-201ENST00000502853 530 ntBASIC4.8□□□□□ -1.64
CDKL5O76039 MTCYBP17-201ENST00000503579 789 ntBASIC4.8□□□□□ -1.64
CDKL5O76039 AC025554.1-201ENST00000505641 188 ntBASIC4.8□□□□□ -1.64
CDKL5O76039 AC002456.2-201ENST00000509356 380 ntBASIC4.8□□□□□ -1.64
CDKL5O76039 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.8□□□□□ -1.64
CDKL5O76039 AC108471.1-201ENST00000513977 287 ntBASIC4.8□□□□□ -1.64
CDKL5O76039 RNU6-314P-201ENST00000516574 104 ntBASIC4.8□□□□□ -1.64
CDKL5O76039 RN7SKP283-201ENST00000517197 270 ntBASIC4.8□□□□□ -1.64
CDKL5O76039 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.8□□□□□ -1.64
CDKL5O76039 AC118273.2-201ENST00000532092 465 ntBASIC4.8□□□□□ -1.64
CDKL5O76039 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.8□□□□□ -1.64
CDKL5O76039 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.8□□□□□ -1.64
CDKL5O76039 AC091489.2-201ENST00000566263 604 ntBASIC4.8□□□□□ -1.64
CDKL5O76039 RPL23AP87-202ENST00000573039 466 ntBASIC4.8□□□□□ -1.64
CDKL5O76039 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.8□□□□□ -1.64
CDKL5O76039 AC104662.1-201ENST00000604448 511 ntBASIC4.8□□□□□ -1.64
CDKL5O76039 AL022154.1-201ENST00000604698 785 ntBASIC4.8□□□□□ -1.64
CDKL5O76039 AC069304.2-201ENST00000605154 435 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms