Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.36□□□□□ -2.03
SNRNP200O75643 HMGB1P41-201ENST00000520234 440 ntBASIC2.36□□□□□ -2.03
SNRNP200O75643 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.36□□□□□ -2.03
SNRNP200O75643 AC016877.3-201ENST00000606778 504 ntBASIC2.36□□□□□ -2.03
SNRNP200O75643 AC016252.1-201ENST00000609721 474 ntBASIC2.36□□□□□ -2.03
SNRNP200O75643 AC079228.1-201ENST00000624774 1049 ntBASIC2.36□□□□□ -2.03
SNRNP200O75643 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.36□□□□□ -2.03
SNRNP200O75643 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.36□□□□□ -2.03
SNRNP200O75643 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.36□□□□□ -2.03
SNRNP200O75643 CCNB2P1-201ENST00000399411 1150 ntBASIC2.36□□□□□ -2.03
SNRNP200O75643 SMC4P1-201ENST00000414479 527 ntBASIC2.36□□□□□ -2.03
SNRNP200O75643 NECAP1P2-201ENST00000455668 727 ntBASIC2.36□□□□□ -2.03
SNRNP200O75643 VN1R17P-201ENST00000472048 1090 ntBASIC2.36□□□□□ -2.03
SNRNP200O75643 RPL5P23-201ENST00000496040 868 ntBASIC2.36□□□□□ -2.03
SNRNP200O75643 RNU1-41P-201ENST00000516161 162 ntBASIC2.36□□□□□ -2.03
SNRNP200O75643 RNU1-48P-201ENST00000516400 162 ntBASIC2.36□□□□□ -2.03
SNRNP200O75643 PTP4A1P6-201ENST00000531034 478 ntBASIC2.36□□□□□ -2.03
SNRNP200O75643 AL157394.1-201ENST00000562983 1224 ntBASIC2.36□□□□□ -2.03
SNRNP200O75643 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.36□□□□□ -2.03
SNRNP200O75643 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.36□□□□□ -2.03
SNRNP200O75643 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC2.36□□□□□ -2.03
SNRNP200O75643 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SNRNP200O75643 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SNRNP200O75643 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SNRNP200O75643 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
SNRNP200O75643 AP000526.1-201ENST00000603308 1388 ntBASIC2.35□□□□□ -2.03
SNRNP200O75643 SNORA41-201ENST00000384675 132 ntBASIC2.35□□□□□ -2.03
SNRNP200O75643 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.35□□□□□ -2.03
SNRNP200O75643 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.35□□□□□ -2.03
SNRNP200O75643 AC073069.1-201ENST00000428657 441 ntBASIC2.35□□□□□ -2.03
SNRNP200O75643 AL513328.1-201ENST00000446460 224 ntBASIC2.35□□□□□ -2.03
SNRNP200O75643 RPL9P32-201ENST00000464118 620 ntBASIC2.35□□□□□ -2.03
SNRNP200O75643 AC108860.1-201ENST00000484521 383 ntBASIC2.35□□□□□ -2.03
SNRNP200O75643 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.35□□□□□ -2.03
SNRNP200O75643 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SNRNP200O75643 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.35□□□□□ -2.03
SNRNP200O75643 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.35□□□□□ -2.03
SNRNP200O75643 AC091046.2-201ENST00000620775 665 ntBASIC2.35□□□□□ -2.03
SNRNP200O75643 IGHVIII-44-202ENST00000636235 289 ntBASIC2.35□□□□□ -2.03
SNRNP200O75643 XPOTP1-201ENST00000443317 2398 ntBASIC2.35□□□□□ -2.03
SNRNP200O75643 ELF2P3-201ENST00000445099 1506 ntBASIC2.35□□□□□ -2.03
SNRNP200O75643 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SNRNP200O75643 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
SNRNP200O75643 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SNRNP200O75643 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.35□□□□□ -2.03
SNRNP200O75643 MRPL50P2-201ENST00000416821 482 ntBASIC2.35□□□□□ -2.03
SNRNP200O75643 SDCBPP3-201ENST00000419629 891 ntBASIC2.35□□□□□ -2.03
SNRNP200O75643 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC2.35□□□□□ -2.03
SNRNP200O75643 HSD52-202ENST00000436225 772 ntTSL 3 BASIC2.35□□□□□ -2.03
SNRNP200O75643 AC023050.1-201ENST00000498198 304 ntBASIC2.35□□□□□ -2.03
SNRNP200O75643 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.35□□□□□ -2.03
SNRNP200O75643 AP003102.1-201ENST00000525638 661 ntBASIC2.35□□□□□ -2.03
SNRNP200O75643 OR4H12P-201ENST00000556269 907 ntBASIC2.35□□□□□ -2.03
SNRNP200O75643 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC2.35□□□□□ -2.03
SNRNP200O75643 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.35□□□□□ -2.03
SNRNP200O75643 AP003072.5-201ENST00000623872 773 ntBASIC2.35□□□□□ -2.03
SNRNP200O75643 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
SNRNP200O75643 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.34□□□□□ -2.03
SNRNP200O75643 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.34□□□□□ -2.03
SNRNP200O75643 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.34□□□□□ -2.03
SNRNP200O75643 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
SNRNP200O75643 ATG3P1-201ENST00000419507 911 ntBASIC2.34□□□□□ -2.03
SNRNP200O75643 RPS12P2-201ENST00000439728 269 ntBASIC2.34□□□□□ -2.03
SNRNP200O75643 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC2.34□□□□□ -2.03
SNRNP200O75643 COX6CP2-201ENST00000444980 225 ntBASIC2.34□□□□□ -2.03
SNRNP200O75643 HSPE1P6-201ENST00000479457 291 ntBASIC2.34□□□□□ -2.03
SNRNP200O75643 RN7SKP282-201ENST00000516824 299 ntBASIC2.34□□□□□ -2.03
SNRNP200O75643 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
SNRNP200O75643 OR4T1P-201ENST00000554933 911 ntBASIC2.34□□□□□ -2.03
SNRNP200O75643 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.34□□□□□ -2.03
SNRNP200O75643 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.34□□□□□ -2.03
SNRNP200O75643 AC105429.2-201ENST00000610567 517 ntBASIC2.34□□□□□ -2.03
SNRNP200O75643 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.34□□□□□ -2.03
SNRNP200O75643 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
SNRNP200O75643 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.34□□□□□ -2.04
SNRNP200O75643 MIR518C-201ENST00000384822 101 ntBASIC2.33□□□□□ -2.04
SNRNP200O75643 DHFRP5-201ENST00000406944 564 ntBASIC2.33□□□□□ -2.04
SNRNP200O75643 AL158825.1-201ENST00000414735 521 ntBASIC2.33□□□□□ -2.04
SNRNP200O75643 TEX41-204ENST00000423031 491 ntTSL 4 BASIC2.33□□□□□ -2.04
SNRNP200O75643 SAR1AP4-201ENST00000429225 591 ntBASIC2.33□□□□□ -2.04
SNRNP200O75643 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.33□□□□□ -2.04
SNRNP200O75643 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.33□□□□□ -2.04
SNRNP200O75643 TRBV8-1-201ENST00000481590 279 ntBASIC2.33□□□□□ -2.04
SNRNP200O75643 SEC11B-201ENST00000518383 499 ntBASIC2.33□□□□□ -2.04
SNRNP200O75643 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.33□□□□□ -2.04
SNRNP200O75643 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.33□□□□□ -2.04
SNRNP200O75643 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.33□□□□□ -2.04
SNRNP200O75643 MIR4298-201ENST00000584380 73 ntBASIC2.33□□□□□ -2.04
SNRNP200O75643 AC243756.2-201ENST00000618406 463 ntBASIC2.33□□□□□ -2.04
SNRNP200O75643 AC046144.1-201ENST00000478559 1853 ntBASIC2.33□□□□□ -2.04
SNRNP200O75643 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
SNRNP200O75643 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
SNRNP200O75643 RNVU1-3-201ENST00000364313 161 ntBASIC2.33□□□□□ -2.04
SNRNP200O75643 MIR591-201ENST00000385290 95 ntBASIC2.33□□□□□ -2.04
SNRNP200O75643 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.33□□□□□ -2.04
SNRNP200O75643 MYL8P-204ENST00000431574 518 ntBASIC2.33□□□□□ -2.04
SNRNP200O75643 AL139415.2-201ENST00000431968 163 ntBASIC2.33□□□□□ -2.04
SNRNP200O75643 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.33□□□□□ -2.04
SNRNP200O75643 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.33□□□□□ -2.04
SNRNP200O75643 HMGN1P5-201ENST00000448591 263 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms