Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 RPL12P18-201ENST00000437175 325 ntBASIC1.11□□□□□ -2.23
USH2AO75445 AC073587.1-201ENST00000447093 876 ntBASIC1.11□□□□□ -2.23
USH2AO75445 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC1.11□□□□□ -2.23
USH2AO75445 AC091544.1-201ENST00000484702 348 ntBASIC1.11□□□□□ -2.23
USH2AO75445 PANCR-202ENST00000513690 448 ntTSL 2 BASIC1.11□□□□□ -2.23
USH2AO75445 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC1.11□□□□□ -2.23
USH2AO75445 HPRT1P3-201ENST00000539521 576 ntBASIC1.11□□□□□ -2.23
USH2AO75445 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC1.11□□□□□ -2.23
USH2AO75445 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC1.11□□□□□ -2.23
USH2AO75445 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC1.11□□□□□ -2.23
USH2AO75445 BX248123.2-201ENST00000606318 124 ntBASIC1.11□□□□□ -2.23
USH2AO75445 AL451074.6-201ENST00000608512 729 ntBASIC1.11□□□□□ -2.23
USH2AO75445 AL391813.2-201ENST00000609113 322 ntBASIC1.11□□□□□ -2.23
USH2AO75445 MIR6895-201ENST00000613497 78 ntBASIC1.11□□□□□ -2.23
USH2AO75445 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
USH2AO75445 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC1.11□□□□□ -2.23
USH2AO75445 Y_RNA.458-201ENST00000384240 102 ntBASIC1.11□□□□□ -2.23
USH2AO75445 VDAC1P3-201ENST00000434069 851 ntBASIC1.11□□□□□ -2.23
USH2AO75445 NDUFB4P6-201ENST00000436819 366 ntBASIC1.11□□□□□ -2.23
USH2AO75445 HMGN1P18-201ENST00000457642 277 ntBASIC1.11□□□□□ -2.23
USH2AO75445 RPL23AP49-201ENST00000492925 468 ntBASIC1.11□□□□□ -2.23
USH2AO75445 AP001636.2-201ENST00000525517 696 ntBASIC1.11□□□□□ -2.23
USH2AO75445 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC1.11□□□□□ -2.23
USH2AO75445 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
USH2AO75445 CUBN-201ENST00000377823 705 ntTSL 3 BASIC1.1□□□□□ -2.23
USH2AO75445 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.1□□□□□ -2.23
USH2AO75445 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC1.1□□□□□ -2.23
USH2AO75445 AC026436.1-201ENST00000510537 270 ntBASIC1.1□□□□□ -2.23
USH2AO75445 AL354943.1-201ENST00000572103 781 ntBASIC1.1□□□□□ -2.23
USH2AO75445 CR589904.2-201ENST00000612533 440 ntBASIC1.1□□□□□ -2.23
USH2AO75445 AL356490.1-201ENST00000623079 479 ntBASIC1.1□□□□□ -2.23
USH2AO75445 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC1.1□□□□□ -2.23
USH2AO75445 AL031985.3-201ENST00000565390 2449 ntBASIC1.1□□□□□ -2.23
USH2AO75445 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
USH2AO75445 AC138915.3-201ENST00000562908 1389 ntBASIC1.1□□□□□ -2.23
USH2AO75445 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC1.1□□□□□ -2.23
USH2AO75445 Y_RNA.251-201ENST00000364551 99 ntBASIC1.1□□□□□ -2.23
USH2AO75445 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC1.1□□□□□ -2.23
USH2AO75445 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.1□□□□□ -2.23
USH2AO75445 AC010378.1-201ENST00000619270 362 ntBASIC1.1□□□□□ -2.23
USH2AO75445 AL160394.1-201ENST00000624765 724 ntBASIC1.1□□□□□ -2.23
USH2AO75445 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC1.1□□□□□ -2.23
USH2AO75445 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
USH2AO75445 AC006484.1-201ENST00000435086 1884 ntBASIC1.1□□□□□ -2.23
USH2AO75445 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.1□□□□□ -2.23
USH2AO75445 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
USH2AO75445 MTND5P23-201ENST00000430812 1655 ntBASIC1.1□□□□□ -2.23
USH2AO75445 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC1.1□□□□□ -2.23
USH2AO75445 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
USH2AO75445 Y_RNA.36-201ENST00000362602 112 ntBASIC1.1□□□□□ -2.23
USH2AO75445 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC1.1□□□□□ -2.23
USH2AO75445 AC245054.2-201ENST00000415639 319 ntBASIC1.1□□□□□ -2.23
USH2AO75445 USP12PY-201ENST00000427677 1064 ntBASIC1.1□□□□□ -2.23
USH2AO75445 MTND2P29-201ENST00000438595 412 ntBASIC1.1□□□□□ -2.23
USH2AO75445 RPL21P41-201ENST00000459863 264 ntBASIC1.1□□□□□ -2.23
USH2AO75445 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
USH2AO75445 RFESD-208ENST00000513950 464 ntTSL 5 BASIC1.1□□□□□ -2.23
USH2AO75445 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC1.1□□□□□ -2.23
USH2AO75445 RNA5SP220-201ENST00000516298 104 ntBASIC1.1□□□□□ -2.23
USH2AO75445 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.1□□□□□ -2.23
USH2AO75445 TTC39DP-201ENST00000416781 1688 ntBASIC1.1□□□□□ -2.23
USH2AO75445 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
USH2AO75445 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC1.1□□□□□ -2.23
USH2AO75445 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC1.1□□□□□ -2.23
USH2AO75445 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
USH2AO75445 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC1.1□□□□□ -2.23
USH2AO75445 RPS7P9-201ENST00000414704 586 ntBASIC1.1□□□□□ -2.23
USH2AO75445 AC093151.1-201ENST00000427711 313 ntBASIC1.1□□□□□ -2.23
USH2AO75445 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC1.1□□□□□ -2.23
USH2AO75445 RPS15AP28-201ENST00000435088 386 ntBASIC1.1□□□□□ -2.23
USH2AO75445 AC016687.1-201ENST00000482574 353 ntBASIC1.1□□□□□ -2.23
USH2AO75445 Y_RNA.681-201ENST00000516445 113 ntBASIC1.1□□□□□ -2.23
USH2AO75445 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC1.1□□□□□ -2.23
USH2AO75445 RGS4-209ENST00000531057 544 ntTSL 4 BASIC1.1□□□□□ -2.23
USH2AO75445 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.1□□□□□ -2.23
USH2AO75445 AL731537.2-201ENST00000561565 951 ntBASIC1.1□□□□□ -2.23
USH2AO75445 AP001521.1-201ENST00000609150 300 ntBASIC1.1□□□□□ -2.23
USH2AO75445 AL359715.5-201ENST00000623431 443 ntBASIC1.1□□□□□ -2.23
USH2AO75445 MIR1291-201ENST00000627649 87 ntBASIC1.1□□□□□ -2.23
USH2AO75445 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.1□□□□□ -2.23
USH2AO75445 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC1.1□□□□□ -2.23
USH2AO75445 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC1.09□□□□□ -2.23
USH2AO75445 AC107021.2-201ENST00000567714 2095 ntBASIC1.09□□□□□ -2.23
USH2AO75445 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC1.09□□□□□ -2.23
USH2AO75445 MIR448-201ENST00000362131 111 ntBASIC1.09□□□□□ -2.23
USH2AO75445 MIR221-201ENST00000385135 110 ntBASIC1.09□□□□□ -2.23
USH2AO75445 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.09□□□□□ -2.23
USH2AO75445 AL513321.1-201ENST00000441175 761 ntBASIC1.09□□□□□ -2.23
USH2AO75445 ACTR6P1-201ENST00000514311 1104 ntBASIC1.09□□□□□ -2.23
USH2AO75445 IGKV2D-36-201ENST00000518643 226 ntBASIC1.09□□□□□ -2.23
USH2AO75445 AC104027.1-201ENST00000521887 300 ntBASIC1.09□□□□□ -2.23
USH2AO75445 DNAJC19P9-201ENST00000555084 351 ntBASIC1.09□□□□□ -2.23
USH2AO75445 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.09□□□□□ -2.23
USH2AO75445 AC010546.1-201ENST00000569391 485 ntBASIC1.09□□□□□ -2.23
USH2AO75445 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.09□□□□□ -2.23
USH2AO75445 AC067747.1-201ENST00000608026 250 ntBASIC1.09□□□□□ -2.23
USH2AO75445 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
USH2AO75445 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
USH2AO75445 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC1.09□□□□□ -2.23
USH2AO75445 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms