Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC6.35□□□□□ -1.39
PTCD1O75127 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC6.35□□□□□ -1.39
PTCD1O75127 AC136443.5-201ENST00000603741 370 ntBASIC6.35□□□□□ -1.39
PTCD1O75127 AL355598.1-201ENST00000604169 202 ntBASIC6.35□□□□□ -1.39
PTCD1O75127 AC004908.2-201ENST00000609090 574 ntBASIC6.35□□□□□ -1.39
PTCD1O75127 AC105429.2-201ENST00000610567 517 ntBASIC6.35□□□□□ -1.39
PTCD1O75127 uc_338.5-201ENST00000611839 155 ntBASIC6.35□□□□□ -1.39
PTCD1O75127 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC6.35□□□□□ -1.39
PTCD1O75127 AL132822.1-201ENST00000617063 513 ntBASIC6.35□□□□□ -1.39
PTCD1O75127 AC009248.2-201ENST00000619826 254 ntBASIC6.35□□□□□ -1.39
PTCD1O75127 AC022106.2-201ENST00000620114 757 ntBASIC6.35□□□□□ -1.39
PTCD1O75127 7SK.10-201ENST00000621414 298 ntBASIC6.35□□□□□ -1.39
PTCD1O75127 AC079597.1-201ENST00000624306 508 ntBASIC6.35□□□□□ -1.39
PTCD1O75127 TPTEP1-208ENST00000636884 213 ntBASIC6.35□□□□□ -1.39
PTCD1O75127 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC6.35□□□□□ -1.39
PTCD1O75127 MTND5P16-201ENST00000460269 1703 ntBASIC6.35□□□□□ -1.39
PTCD1O75127 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.35□□□□□ -1.39
PTCD1O75127 AC097714.1-201ENST00000511272 1647 ntBASIC6.35□□□□□ -1.39
PTCD1O75127 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC6.35□□□□□ -1.39
PTCD1O75127 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PTCD1O75127 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
PTCD1O75127 SLC2A3P1-201ENST00000519666 1451 ntBASIC6.34□□□□□ -1.39
PTCD1O75127 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
PTCD1O75127 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
PTCD1O75127 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
PTCD1O75127 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
PTCD1O75127 MTND4P14-201ENST00000435799 1354 ntBASIC6.34□□□□□ -1.39
PTCD1O75127 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PTCD1O75127 AC130650.2-201ENST00000618736 2403 ntBASIC6.34□□□□□ -1.39
PTCD1O75127 AL606537.1-201ENST00000607258 2011 ntBASIC6.34□□□□□ -1.39
PTCD1O75127 RPL7P26-201ENST00000333817 754 ntBASIC6.34□□□□□ -1.39
PTCD1O75127 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PTCD1O75127 RNU6-74P-201ENST00000384235 107 ntBASIC6.34□□□□□ -1.39
PTCD1O75127 AL357515.1-201ENST00000402967 542 ntBASIC6.34□□□□□ -1.39
PTCD1O75127 AC073136.2-201ENST00000417282 849 ntBASIC6.34□□□□□ -1.39
PTCD1O75127 AC009161.1-201ENST00000417306 376 ntBASIC6.34□□□□□ -1.39
PTCD1O75127 BX276092.6-201ENST00000430476 250 ntBASIC6.34□□□□□ -1.39
PTCD1O75127 CACYBPP2-201ENST00000453625 678 ntBASIC6.34□□□□□ -1.39
PTCD1O75127 BX276092.8-201ENST00000455722 250 ntBASIC6.34□□□□□ -1.39
PTCD1O75127 AL583843.1-201ENST00000456070 346 ntBASIC6.34□□□□□ -1.39
PTCD1O75127 AC078785.3-201ENST00000476607 425 ntBASIC6.34□□□□□ -1.39
PTCD1O75127 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC6.34□□□□□ -1.39
PTCD1O75127 AC093767.1-201ENST00000504523 156 ntBASIC6.34□□□□□ -1.39
PTCD1O75127 CCDC34P1-201ENST00000507441 517 ntBASIC6.34□□□□□ -1.39
PTCD1O75127 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PTCD1O75127 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC6.34□□□□□ -1.39
PTCD1O75127 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC6.34□□□□□ -1.39
PTCD1O75127 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC6.34□□□□□ -1.39
PTCD1O75127 RNU4ATAC18P-201ENST00000516179 126 ntBASIC6.34□□□□□ -1.39
PTCD1O75127 RNU6-410P-201ENST00000517006 107 ntBASIC6.34□□□□□ -1.39
PTCD1O75127 AC009643.1-201ENST00000532030 391 ntBASIC6.34□□□□□ -1.39
PTCD1O75127 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC6.34□□□□□ -1.39
PTCD1O75127 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC6.34□□□□□ -1.39
PTCD1O75127 ATP5J2P6-201ENST00000565203 266 ntBASIC6.34□□□□□ -1.39
PTCD1O75127 AC005668.1-201ENST00000571142 476 ntBASIC6.34□□□□□ -1.39
PTCD1O75127 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC6.34□□□□□ -1.39
PTCD1O75127 MIR3146-201ENST00000580367 79 ntBASIC6.34□□□□□ -1.39
PTCD1O75127 RN7SL690P-201ENST00000582087 240 ntBASIC6.34□□□□□ -1.39
PTCD1O75127 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC6.34□□□□□ -1.39
PTCD1O75127 AC006504.6-201ENST00000590142 199 ntBASIC6.34□□□□□ -1.39
PTCD1O75127 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC6.34□□□□□ -1.39
PTCD1O75127 AL603758.1-201ENST00000618654 241 ntBASIC6.34□□□□□ -1.39
PTCD1O75127 AC019206.1-201ENST00000621938 425 ntBASIC6.34□□□□□ -1.39
PTCD1O75127 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC6.34□□□□□ -1.39
PTCD1O75127 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
PTCD1O75127 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PTCD1O75127 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PTCD1O75127 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
PTCD1O75127 RIOK3P1-201ENST00000418778 1528 ntBASIC6.34□□□□□ -1.39
PTCD1O75127 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
PTCD1O75127 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PTCD1O75127 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.4
PTCD1O75127 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
PTCD1O75127 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
PTCD1O75127 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PTCD1O75127 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PTCD1O75127 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC6.33□□□□□ -1.4
PTCD1O75127 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PTCD1O75127 AP002512.4-202ENST00000641599 4530 ntBASIC6.33□□□□□ -1.4
PTCD1O75127 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
PTCD1O75127 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PTCD1O75127 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC6.33□□□□□ -1.4
PTCD1O75127 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
PTCD1O75127 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PTCD1O75127 RNU6-1226P-201ENST00000384317 107 ntBASIC6.33□□□□□ -1.4
PTCD1O75127 AL354868.1-201ENST00000417077 482 ntBASIC6.33□□□□□ -1.4
PTCD1O75127 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC6.33□□□□□ -1.4
PTCD1O75127 AC012065.2-201ENST00000421295 375 ntBASIC6.33□□□□□ -1.4
PTCD1O75127 COX6CP13-201ENST00000428703 226 ntBASIC6.33□□□□□ -1.4
PTCD1O75127 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC6.33□□□□□ -1.4
PTCD1O75127 AL450023.3-201ENST00000440592 271 ntBASIC6.33□□□□□ -1.4
PTCD1O75127 AC079781.2-201ENST00000446424 169 ntBASIC6.33□□□□□ -1.4
PTCD1O75127 snoU13.8-201ENST00000458890 104 ntBASIC6.33□□□□□ -1.4
PTCD1O75127 AC068587.1-201ENST00000483613 781 ntBASIC6.33□□□□□ -1.4
PTCD1O75127 EIF4EP3-201ENST00000498782 656 ntBASIC6.33□□□□□ -1.4
PTCD1O75127 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC6.33□□□□□ -1.4
PTCD1O75127 AP003072.2-201ENST00000527756 676 ntBASIC6.33□□□□□ -1.4
PTCD1O75127 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC6.33□□□□□ -1.4
PTCD1O75127 OR4T1P-201ENST00000554933 911 ntBASIC6.33□□□□□ -1.4
PTCD1O75127 SULT1C2P2-201ENST00000562517 294 ntBASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms