Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 MTATP6P16-201ENST00000434543 526 ntBASIC5.63□□□□□ -1.51
SOX1O00570 PRPS1P1-201ENST00000445305 876 ntBASIC5.63□□□□□ -1.51
SOX1O00570 DHFRP3-201ENST00000455595 559 ntBASIC5.63□□□□□ -1.51
SOX1O00570 RPS29P15-201ENST00000458329 171 ntBASIC5.63□□□□□ -1.51
SOX1O00570 ALDH7A1P3-201ENST00000492517 345 ntBASIC5.63□□□□□ -1.51
SOX1O00570 MRPS33P2-201ENST00000507850 322 ntBASIC5.63□□□□□ -1.51
SOX1O00570 RNU6-1137P-201ENST00000517073 99 ntBASIC5.63□□□□□ -1.51
SOX1O00570 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.63□□□□□ -1.51
SOX1O00570 AC128657.1-201ENST00000549459 145 ntBASIC5.63□□□□□ -1.51
SOX1O00570 LSM3P2-201ENST00000551246 273 ntBASIC5.63□□□□□ -1.51
SOX1O00570 RN7SL690P-201ENST00000582087 240 ntBASIC5.63□□□□□ -1.51
SOX1O00570 MIR3939-201ENST00000582614 106 ntBASIC5.63□□□□□ -1.51
SOX1O00570 MIR5690-201ENST00000583739 73 ntBASIC5.63□□□□□ -1.51
SOX1O00570 MIR3942-201ENST00000585264 109 ntBASIC5.63□□□□□ -1.51
SOX1O00570 AL442067.1-201ENST00000613261 223 ntBASIC5.63□□□□□ -1.51
SOX1O00570 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.63□□□□□ -1.51
SOX1O00570 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
SOX1O00570 RMST_9.1-201ENST00000619945 193 ntBASIC5.63□□□□□ -1.51
SOX1O00570 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.63□□□□□ -1.51
SOX1O00570 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC5.63□□□□□ -1.51
SOX1O00570 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.63□□□□□ -1.51
SOX1O00570 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SOX1O00570 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SOX1O00570 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
SOX1O00570 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SOX1O00570 DHX40P1-201ENST00000588725 1412 ntBASIC5.63□□□□□ -1.51
SOX1O00570 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
SOX1O00570 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.63□□□□□ -1.51
SOX1O00570 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SOX1O00570 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SOX1O00570 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SOX1O00570 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SOX1O00570 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
SOX1O00570 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
SOX1O00570 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SOX1O00570 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
SOX1O00570 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SOX1O00570 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SOX1O00570 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SOX1O00570 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SOX1O00570 RNU6-525P-201ENST00000363685 104 ntBASIC5.62□□□□□ -1.51
SOX1O00570 RNA5SP447-201ENST00000363749 119 ntBASIC5.62□□□□□ -1.51
SOX1O00570 Y_RNA.234-201ENST00000364409 97 ntBASIC5.62□□□□□ -1.51
SOX1O00570 U3.11-201ENST00000364476 212 ntBASIC5.62□□□□□ -1.51
SOX1O00570 MIR298-201ENST00000401212 88 ntBASIC5.62□□□□□ -1.51
SOX1O00570 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.62□□□□□ -1.51
SOX1O00570 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC5.62□□□□□ -1.51
SOX1O00570 AP000936.3-201ENST00000438127 255 ntBASIC5.62□□□□□ -1.51
SOX1O00570 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.62□□□□□ -1.51
SOX1O00570 KNOP1P3-201ENST00000446933 426 ntBASIC5.62□□□□□ -1.51
SOX1O00570 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC5.62□□□□□ -1.51
SOX1O00570 RPL7P52-201ENST00000449200 742 ntBASIC5.62□□□□□ -1.51
SOX1O00570 BTF3P15-201ENST00000455606 336 ntBASIC5.62□□□□□ -1.51
SOX1O00570 RNU7-66P-201ENST00000459469 62 ntBASIC5.62□□□□□ -1.51
SOX1O00570 AP001992.1-205ENST00000462248 379 ntBASIC5.62□□□□□ -1.51
SOX1O00570 AC109327.1-201ENST00000471666 403 ntBASIC5.62□□□□□ -1.51
SOX1O00570 AC021382.1-201ENST00000483523 359 ntBASIC5.62□□□□□ -1.51
SOX1O00570 AC092436.1-201ENST00000506450 503 ntBASIC5.62□□□□□ -1.51
SOX1O00570 AC098591.2-201ENST00000510152 315 ntBASIC5.62□□□□□ -1.51
SOX1O00570 MTCO2P24-201ENST00000515611 426 ntBASIC5.62□□□□□ -1.51
SOX1O00570 SNORA67.7-201ENST00000516664 135 ntBASIC5.62□□□□□ -1.51
SOX1O00570 RNU6-1088P-201ENST00000516850 104 ntBASIC5.62□□□□□ -1.51
SOX1O00570 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.62□□□□□ -1.51
SOX1O00570 AP000889.2-201ENST00000532684 490 ntBASIC5.62□□□□□ -1.51
SOX1O00570 AC068993.1-201ENST00000546724 589 ntBASIC5.62□□□□□ -1.51
SOX1O00570 MIR4444-1-201ENST00000581696 74 ntBASIC5.62□□□□□ -1.51
SOX1O00570 MIR4444-2-201ENST00000584390 74 ntBASIC5.62□□□□□ -1.51
SOX1O00570 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC5.62□□□□□ -1.51
SOX1O00570 AC007938.3-201ENST00000604965 623 ntBASIC5.62□□□□□ -1.51
SOX1O00570 AC245517.5-201ENST00000611529 162 ntBASIC5.62□□□□□ -1.51
SOX1O00570 AL596245.1-201ENST00000618994 362 ntBASIC5.62□□□□□ -1.51
SOX1O00570 uc_338.11-201ENST00000619132 160 ntBASIC5.62□□□□□ -1.51
SOX1O00570 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC5.62□□□□□ -1.51
SOX1O00570 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
SOX1O00570 RBPJP2-201ENST00000618187 1444 ntBASIC5.62□□□□□ -1.51
SOX1O00570 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SOX1O00570 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SOX1O00570 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.62□□□□□ -1.51
SOX1O00570 AC100757.1-201ENST00000616872 1835 ntBASIC5.62□□□□□ -1.51
SOX1O00570 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SOX1O00570 AC092747.4-201ENST00000620519 1861 ntBASIC5.62□□□□□ -1.51
SOX1O00570 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SOX1O00570 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SOX1O00570 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.61□□□□□ -1.51
SOX1O00570 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SOX1O00570 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SOX1O00570 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC5.61□□□□□ -1.51
SOX1O00570 SNORA62.1-201ENST00000364287 154 ntBASIC5.61□□□□□ -1.51
SOX1O00570 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
SOX1O00570 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
SOX1O00570 MT-TR-201ENST00000387439 65 ntBASIC5.61□□□□□ -1.51
SOX1O00570 MIR1182-201ENST00000408363 97 ntBASIC5.61□□□□□ -1.51
SOX1O00570 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.61□□□□□ -1.51
SOX1O00570 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SOX1O00570 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.61□□□□□ -1.51
SOX1O00570 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.61□□□□□ -1.51
SOX1O00570 ELL2P4-201ENST00000446870 1376 ntBASIC5.61□□□□□ -1.51
SOX1O00570 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC5.61□□□□□ -1.51
SOX1O00570 CEACAMP6-201ENST00000452007 574 ntBASIC5.61□□□□□ -1.51
SOX1O00570 ELOCP24-201ENST00000456370 334 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms