Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 AC233280.2-201ENST00000603917 1070 ntBASIC2.5□□□□□ -2.01
CACNA1AO00555 AC244205.2-202ENST00000635781 342 ntBASIC2.5□□□□□ -2.01
CACNA1AO00555 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
CACNA1AO00555 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
CACNA1AO00555 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
CACNA1AO00555 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CACNA1AO00555 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
CACNA1AO00555 SNORD62.1-201ENST00000362541 86 ntBASIC2.5□□□□□ -2.01
CACNA1AO00555 RNA5SP322-201ENST00000363617 119 ntBASIC2.5□□□□□ -2.01
CACNA1AO00555 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC2.5□□□□□ -2.01
CACNA1AO00555 AC104297.1-201ENST00000393779 870 ntBASIC2.5□□□□□ -2.01
CACNA1AO00555 AL022400.1-201ENST00000423946 935 ntBASIC2.5□□□□□ -2.01
CACNA1AO00555 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.5□□□□□ -2.01
CACNA1AO00555 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.5□□□□□ -2.01
CACNA1AO00555 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC2.5□□□□□ -2.01
CACNA1AO00555 AL669942.2-201ENST00000620352 697 ntBASIC2.5□□□□□ -2.01
CACNA1AO00555 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.5□□□□□ -2.01
CACNA1AO00555 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.5□□□□□ -2.01
CACNA1AO00555 RHOT1P2-201ENST00000366423 333 ntBASIC2.49□□□□□ -2.01
CACNA1AO00555 Y_RNA.393-201ENST00000383936 102 ntBASIC2.49□□□□□ -2.01
CACNA1AO00555 RNU6-882P-201ENST00000391025 103 ntBASIC2.49□□□□□ -2.01
CACNA1AO00555 RNU6-1140P-201ENST00000410517 106 ntBASIC2.49□□□□□ -2.01
CACNA1AO00555 AC009237.2-201ENST00000421358 284 ntBASIC2.49□□□□□ -2.01
CACNA1AO00555 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC2.49□□□□□ -2.01
CACNA1AO00555 NPM1P49-201ENST00000448027 714 ntBASIC2.49□□□□□ -2.01
CACNA1AO00555 SRIP1-201ENST00000489235 288 ntBASIC2.49□□□□□ -2.01
CACNA1AO00555 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CACNA1AO00555 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC2.49□□□□□ -2.01
CACNA1AO00555 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
CACNA1AO00555 RNU6-356P-201ENST00000384140 107 ntBASIC2.49□□□□□ -2.01
CACNA1AO00555 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.49□□□□□ -2.01
CACNA1AO00555 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.49□□□□□ -2.01
CACNA1AO00555 AC003989.2-201ENST00000440224 169 ntBASIC2.49□□□□□ -2.01
CACNA1AO00555 PPP1R11P1-201ENST00000486095 376 ntBASIC2.49□□□□□ -2.01
CACNA1AO00555 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC2.49□□□□□ -2.01
CACNA1AO00555 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.49□□□□□ -2.01
CACNA1AO00555 AL391156.1-201ENST00000554965 554 ntBASIC2.49□□□□□ -2.01
CACNA1AO00555 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.49□□□□□ -2.01
CACNA1AO00555 U4.3-201ENST00000621047 82 ntBASIC2.49□□□□□ -2.01
CACNA1AO00555 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CACNA1AO00555 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
CACNA1AO00555 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC2.49□□□□□ -2.01
CACNA1AO00555 AC010881.1-201ENST00000433830 235 ntBASIC2.48□□□□□ -2.01
CACNA1AO00555 AL354710.1-201ENST00000453641 246 ntBASIC2.48□□□□□ -2.01
CACNA1AO00555 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.48□□□□□ -2.01
CACNA1AO00555 AL161431.1-201ENST00000618966 4205 ntBASIC2.48□□□□□ -2.01
CACNA1AO00555 AF127577.6-201ENST00000623352 2191 ntBASIC2.48□□□□□ -2.01
CACNA1AO00555 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
CACNA1AO00555 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CACNA1AO00555 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
CACNA1AO00555 AL133412.1-201ENST00000380194 2992 ntBASIC2.48□□□□□ -2.01
CACNA1AO00555 AC092593.1-201ENST00000515413 1815 ntBASIC2.48□□□□□ -2.01
CACNA1AO00555 RNU6-457P-201ENST00000363999 107 ntBASIC2.48□□□□□ -2.01
CACNA1AO00555 Y_RNA.294-201ENST00000364916 102 ntBASIC2.48□□□□□ -2.01
CACNA1AO00555 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CACNA1AO00555 AP1B1P2-201ENST00000416196 106 ntBASIC2.48□□□□□ -2.01
CACNA1AO00555 EIF4EP1-201ENST00000422311 642 ntBASIC2.48□□□□□ -2.01
CACNA1AO00555 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.48□□□□□ -2.01
CACNA1AO00555 RPL29P29-201ENST00000448725 423 ntBASIC2.48□□□□□ -2.01
CACNA1AO00555 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.48□□□□□ -2.01
CACNA1AO00555 AC091544.1-201ENST00000484702 348 ntBASIC2.48□□□□□ -2.01
CACNA1AO00555 AP001086.1-201ENST00000494882 321 ntBASIC2.48□□□□□ -2.01
CACNA1AO00555 MLLT10P2-201ENST00000506434 249 ntBASIC2.48□□□□□ -2.01
CACNA1AO00555 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.48□□□□□ -2.01
CACNA1AO00555 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.48□□□□□ -2.01
CACNA1AO00555 AC007423.1-201ENST00000605009 627 ntBASIC2.48□□□□□ -2.01
CACNA1AO00555 SNORA35B-201ENST00000607417 129 ntBASIC2.48□□□□□ -2.01
CACNA1AO00555 MIR6086-201ENST00000638065 55 ntBASIC2.48□□□□□ -2.01
CACNA1AO00555 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CACNA1AO00555 AL031985.3-201ENST00000565390 2449 ntBASIC2.48□□□□□ -2.01
CACNA1AO00555 AC110774.1-201ENST00000623567 2018 ntBASIC2.48□□□□□ -2.01
CACNA1AO00555 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CACNA1AO00555 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
CACNA1AO00555 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
CACNA1AO00555 NPM1P37-201ENST00000403105 874 ntBASIC2.47□□□□□ -2.01
CACNA1AO00555 ST13P20-201ENST00000447996 1065 ntBASIC2.47□□□□□ -2.01
CACNA1AO00555 RPS6P2-201ENST00000454208 705 ntBASIC2.47□□□□□ -2.01
CACNA1AO00555 AC140059.1-201ENST00000489238 361 ntBASIC2.47□□□□□ -2.01
CACNA1AO00555 AC118282.1-201ENST00000506408 765 ntBASIC2.47□□□□□ -2.01
CACNA1AO00555 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.47□□□□□ -2.01
CACNA1AO00555 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.47□□□□□ -2.01
CACNA1AO00555 AC026464.5-201ENST00000562497 722 ntBASIC2.47□□□□□ -2.01
CACNA1AO00555 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CACNA1AO00555 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.47□□□□□ -2.01
CACNA1AO00555 AC008568.2-201ENST00000623862 2313 ntBASIC2.47□□□□□ -2.01
CACNA1AO00555 AL049555.1-201ENST00000562834 1933 ntBASIC2.47□□□□□ -2.01
CACNA1AO00555 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.47□□□□□ -2.01
CACNA1AO00555 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
CACNA1AO00555 AC023128.2-201ENST00000420880 1223 ntBASIC2.47□□□□□ -2.01
CACNA1AO00555 AL035551.1-201ENST00000446931 348 ntBASIC2.47□□□□□ -2.01
CACNA1AO00555 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.47□□□□□ -2.01
CACNA1AO00555 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC2.47□□□□□ -2.01
CACNA1AO00555 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC2.47□□□□□ -2.01
CACNA1AO00555 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC2.47□□□□□ -2.01
CACNA1AO00555 AC108078.1-201ENST00000508073 725 ntBASIC2.47□□□□□ -2.01
CACNA1AO00555 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC2.47□□□□□ -2.01
CACNA1AO00555 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.47□□□□□ -2.01
CACNA1AO00555 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC2.47□□□□□ -2.01
CACNA1AO00555 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC2.47□□□□□ -2.01
CACNA1AO00555 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms