Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.69□□□□□ -1.82
RTCAO00442 AL034351.1-201ENST00000605288 668 ntBASIC3.69□□□□□ -1.82
RTCAO00442 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.69□□□□□ -1.82
RTCAO00442 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.69□□□□□ -1.82
RTCAO00442 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.69□□□□□ -1.82
RTCAO00442 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.69□□□□□ -1.82
RTCAO00442 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RTCAO00442 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.69□□□□□ -1.82
RTCAO00442 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
RTCAO00442 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RTCAO00442 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RTCAO00442 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RTCAO00442 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RTCAO00442 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.68□□□□□ -1.82
RTCAO00442 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RTCAO00442 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
RTCAO00442 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
RTCAO00442 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
RTCAO00442 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RTCAO00442 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RTCAO00442 RNU6-492P-201ENST00000363035 104 ntBASIC3.68□□□□□ -1.82
RTCAO00442 RNU6-173P-201ENST00000364215 104 ntBASIC3.68□□□□□ -1.82
RTCAO00442 RNU4-28P-201ENST00000364739 141 ntBASIC3.68□□□□□ -1.82
RTCAO00442 RNU6-636P-201ENST00000384598 107 ntBASIC3.68□□□□□ -1.82
RTCAO00442 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.68□□□□□ -1.82
RTCAO00442 RNU6-628P-201ENST00000410675 107 ntBASIC3.68□□□□□ -1.82
RTCAO00442 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.68□□□□□ -1.82
RTCAO00442 LUZP4P1-201ENST00000415420 344 ntBASIC3.68□□□□□ -1.82
RTCAO00442 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.68□□□□□ -1.82
RTCAO00442 AC092393.1-201ENST00000439625 742 ntBASIC3.68□□□□□ -1.82
RTCAO00442 AC007327.1-201ENST00000447461 264 ntBASIC3.68□□□□□ -1.82
RTCAO00442 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.68□□□□□ -1.82
RTCAO00442 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.68□□□□□ -1.82
RTCAO00442 RPL36AP33-201ENST00000450395 310 ntBASIC3.68□□□□□ -1.82
RTCAO00442 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.68□□□□□ -1.82
RTCAO00442 AC011979.1-201ENST00000472300 483 ntBASIC3.68□□□□□ -1.82
RTCAO00442 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.68□□□□□ -1.82
RTCAO00442 AC006390.1-201ENST00000508068 283 ntBASIC3.68□□□□□ -1.82
RTCAO00442 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.68□□□□□ -1.82
RTCAO00442 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.68□□□□□ -1.82
RTCAO00442 RNU6-27P-201ENST00000516146 107 ntBASIC3.68□□□□□ -1.82
RTCAO00442 MIR2116-201ENST00000517221 80 ntBASIC3.68□□□□□ -1.82
RTCAO00442 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC3.68□□□□□ -1.82
RTCAO00442 AC022695.1-201ENST00000522089 237 ntBASIC3.68□□□□□ -1.82
RTCAO00442 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.68□□□□□ -1.82
RTCAO00442 ERHP1-201ENST00000523006 310 ntBASIC3.68□□□□□ -1.82
RTCAO00442 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.68□□□□□ -1.82
RTCAO00442 MTCO2P15-201ENST00000532655 656 ntBASIC3.68□□□□□ -1.82
RTCAO00442 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.68□□□□□ -1.82
RTCAO00442 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.68□□□□□ -1.82
RTCAO00442 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.68□□□□□ -1.82
RTCAO00442 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.68□□□□□ -1.82
RTCAO00442 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC3.68□□□□□ -1.82
RTCAO00442 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.68□□□□□ -1.82
RTCAO00442 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.68□□□□□ -1.82
RTCAO00442 AP005205.1-201ENST00000563503 508 ntBASIC3.68□□□□□ -1.82
RTCAO00442 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.68□□□□□ -1.82
RTCAO00442 AP001269.3-201ENST00000588718 329 ntBASIC3.68□□□□□ -1.82
RTCAO00442 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.68□□□□□ -1.82
RTCAO00442 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.68□□□□□ -1.82
RTCAO00442 AP003392.5-201ENST00000607857 415 ntBASIC3.68□□□□□ -1.82
RTCAO00442 AC002076.2-201ENST00000617362 122 ntBASIC3.68□□□□□ -1.82
RTCAO00442 AL158163.2-201ENST00000619110 700 ntBASIC3.68□□□□□ -1.82
RTCAO00442 AC006111.3-201ENST00000622137 383 ntBASIC3.68□□□□□ -1.82
RTCAO00442 AC068724.3-201ENST00000625906 87 ntBASIC3.68□□□□□ -1.82
RTCAO00442 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.68□□□□□ -1.82
RTCAO00442 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.68□□□□□ -1.82
RTCAO00442 MTCO1P23-201ENST00000415223 1526 ntBASIC3.68□□□□□ -1.82
RTCAO00442 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RTCAO00442 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RTCAO00442 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RTCAO00442 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RTCAO00442 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RTCAO00442 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.68□□□□□ -1.82
RTCAO00442 AL079305.1-201ENST00000623159 3008 ntBASIC3.68□□□□□ -1.82
RTCAO00442 BDP1P-201ENST00000582658 1990 ntBASIC3.67□□□□□ -1.82
RTCAO00442 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.67□□□□□ -1.82
RTCAO00442 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.67□□□□□ -1.82
RTCAO00442 RNU6-560P-201ENST00000364007 108 ntBASIC3.67□□□□□ -1.82
RTCAO00442 RNA5SP97-201ENST00000365006 84 ntBASIC3.67□□□□□ -1.82
RTCAO00442 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.67□□□□□ -1.82
RTCAO00442 RNU6-878P-201ENST00000384578 110 ntBASIC3.67□□□□□ -1.82
RTCAO00442 RNU6-1300P-201ENST00000391046 108 ntBASIC3.67□□□□□ -1.82
RTCAO00442 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.67□□□□□ -1.82
RTCAO00442 RPS15AP38-201ENST00000413110 372 ntBASIC3.67□□□□□ -1.82
RTCAO00442 AL136133.1-201ENST00000413694 376 ntBASIC3.67□□□□□ -1.82
RTCAO00442 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.67□□□□□ -1.82
RTCAO00442 HMGB1P49-201ENST00000418882 569 ntBASIC3.67□□□□□ -1.82
RTCAO00442 KRR1P1-201ENST00000419430 803 ntBASIC3.67□□□□□ -1.82
RTCAO00442 MTCO3P1-205ENST00000422088 832 ntBASIC3.67□□□□□ -1.82
RTCAO00442 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC3.67□□□□□ -1.82
RTCAO00442 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.67□□□□□ -1.82
RTCAO00442 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.67□□□□□ -1.82
RTCAO00442 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.67□□□□□ -1.82
RTCAO00442 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.67□□□□□ -1.82
RTCAO00442 COX6CP18-201ENST00000448769 222 ntBASIC3.67□□□□□ -1.82
RTCAO00442 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.67□□□□□ -1.82
RTCAO00442 RFC5P1-201ENST00000454419 874 ntBASIC3.67□□□□□ -1.82
RTCAO00442 RPL21P11-201ENST00000461458 483 ntBASIC3.67□□□□□ -1.82
RTCAO00442 RPL21P8-201ENST00000465083 535 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms