Protein–RNA interactions for Protein: A4FU28

CTAGE9, cTAGE family member 9, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTAGE9A4FU28 USP8P1-201ENST00000494673 3183 ntBASIC3.95□□□□□ -1.78
CTAGE9A4FU28 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CTAGE9A4FU28 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.95□□□□□ -1.78
CTAGE9A4FU28 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.95□□□□□ -1.78
CTAGE9A4FU28 BOLA3P4-201ENST00000418151 400 ntBASIC3.95□□□□□ -1.78
CTAGE9A4FU28 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.95□□□□□ -1.78
CTAGE9A4FU28 AL691449.1-201ENST00000426570 421 ntBASIC3.95□□□□□ -1.78
CTAGE9A4FU28 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.95□□□□□ -1.78
CTAGE9A4FU28 AC005345.1-201ENST00000431868 217 ntBASIC3.95□□□□□ -1.78
CTAGE9A4FU28 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.95□□□□□ -1.78
CTAGE9A4FU28 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC3.95□□□□□ -1.78
CTAGE9A4FU28 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.95□□□□□ -1.78
CTAGE9A4FU28 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.95□□□□□ -1.78
CTAGE9A4FU28 RAB11AP1-201ENST00000442978 646 ntBASIC3.95□□□□□ -1.78
CTAGE9A4FU28 AC239367.2-201ENST00000447309 705 ntBASIC3.95□□□□□ -1.78
CTAGE9A4FU28 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.95□□□□□ -1.78
CTAGE9A4FU28 AC006539.3-201ENST00000454258 129 ntBASIC3.95□□□□□ -1.78
CTAGE9A4FU28 BZW1P2-201ENST00000473537 826 ntBASIC3.95□□□□□ -1.78
CTAGE9A4FU28 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.95□□□□□ -1.78
CTAGE9A4FU28 UBE2CP3-201ENST00000502715 450 ntBASIC3.95□□□□□ -1.78
CTAGE9A4FU28 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.95□□□□□ -1.78
CTAGE9A4FU28 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.95□□□□□ -1.78
CTAGE9A4FU28 MTND1P22-201ENST00000510572 951 ntBASIC3.95□□□□□ -1.78
CTAGE9A4FU28 HIGD1AP3-201ENST00000515857 278 ntBASIC3.95□□□□□ -1.78
CTAGE9A4FU28 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.95□□□□□ -1.78
CTAGE9A4FU28 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.95□□□□□ -1.78
CTAGE9A4FU28 AL356057.1-201ENST00000533798 831 ntBASIC3.95□□□□□ -1.78
CTAGE9A4FU28 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.95□□□□□ -1.78
CTAGE9A4FU28 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.95□□□□□ -1.78
CTAGE9A4FU28 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.95□□□□□ -1.78
CTAGE9A4FU28 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.95□□□□□ -1.78
CTAGE9A4FU28 AC090616.2-202ENST00000584248 222 ntBASIC3.95□□□□□ -1.78
CTAGE9A4FU28 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.95□□□□□ -1.78
CTAGE9A4FU28 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.95□□□□□ -1.78
CTAGE9A4FU28 HMGN2P28-201ENST00000606102 262 ntBASIC3.95□□□□□ -1.78
CTAGE9A4FU28 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.95□□□□□ -1.78
CTAGE9A4FU28 AL139418.1-201ENST00000613613 177 ntBASIC3.95□□□□□ -1.78
CTAGE9A4FU28 AC122133.1-201ENST00000613964 233 ntBASIC3.95□□□□□ -1.78
CTAGE9A4FU28 AC079248.2-201ENST00000623779 326 ntBASIC3.95□□□□□ -1.78
CTAGE9A4FU28 AC107982.1-201ENST00000507171 1300 ntBASIC3.95□□□□□ -1.78
CTAGE9A4FU28 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
CTAGE9A4FU28 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.94□□□□□ -1.78
CTAGE9A4FU28 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CTAGE9A4FU28 AP001148.1-201ENST00000624124 2359 ntBASIC3.94□□□□□ -1.78
CTAGE9A4FU28 RNA5SP42-201ENST00000364278 115 ntBASIC3.94□□□□□ -1.78
CTAGE9A4FU28 RNA5SP130-201ENST00000364431 114 ntBASIC3.94□□□□□ -1.78
CTAGE9A4FU28 RNA5SP97-201ENST00000365006 84 ntBASIC3.94□□□□□ -1.78
CTAGE9A4FU28 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CTAGE9A4FU28 SUGT1P1-201ENST00000379514 476 ntBASIC3.94□□□□□ -1.78
CTAGE9A4FU28 RNU6-55P-201ENST00000411092 107 ntBASIC3.94□□□□□ -1.78
CTAGE9A4FU28 RNU6-954P-201ENST00000411355 107 ntBASIC3.94□□□□□ -1.78
CTAGE9A4FU28 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.94□□□□□ -1.78
CTAGE9A4FU28 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.94□□□□□ -1.78
CTAGE9A4FU28 RPL31P12-201ENST00000422587 358 ntBASIC3.94□□□□□ -1.78
CTAGE9A4FU28 AC233981.1-201ENST00000423224 461 ntBASIC3.94□□□□□ -1.78
CTAGE9A4FU28 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.94□□□□□ -1.78
CTAGE9A4FU28 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.94□□□□□ -1.78
CTAGE9A4FU28 RPL31P54-201ENST00000429803 370 ntBASIC3.94□□□□□ -1.78
CTAGE9A4FU28 AC016712.1-201ENST00000431088 378 ntBASIC3.94□□□□□ -1.78
CTAGE9A4FU28 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.94□□□□□ -1.78
CTAGE9A4FU28 RPL21P112-201ENST00000434403 463 ntBASIC3.94□□□□□ -1.78
CTAGE9A4FU28 AL356276.2-201ENST00000435919 558 ntBASIC3.94□□□□□ -1.78
CTAGE9A4FU28 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.94□□□□□ -1.78
CTAGE9A4FU28 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.94□□□□□ -1.78
CTAGE9A4FU28 AL591503.2-201ENST00000442314 1005 ntBASIC3.94□□□□□ -1.78
CTAGE9A4FU28 RSL24D1P3-201ENST00000449255 495 ntBASIC3.94□□□□□ -1.78
CTAGE9A4FU28 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.94□□□□□ -1.78
CTAGE9A4FU28 HMGN3P1-201ENST00000453847 193 ntBASIC3.94□□□□□ -1.78
CTAGE9A4FU28 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.94□□□□□ -1.78
CTAGE9A4FU28 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.94□□□□□ -1.78
CTAGE9A4FU28 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.94□□□□□ -1.78
CTAGE9A4FU28 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.94□□□□□ -1.78
CTAGE9A4FU28 AC010618.1-201ENST00000469924 477 ntBASIC3.94□□□□□ -1.78
CTAGE9A4FU28 SYPL1P1-201ENST00000473622 768 ntBASIC3.94□□□□□ -1.78
CTAGE9A4FU28 AC078785.3-201ENST00000476607 425 ntBASIC3.94□□□□□ -1.78
CTAGE9A4FU28 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.94□□□□□ -1.78
CTAGE9A4FU28 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.94□□□□□ -1.78
CTAGE9A4FU28 RNU6-202P-201ENST00000515998 96 ntBASIC3.94□□□□□ -1.78
CTAGE9A4FU28 RNA5SP164-201ENST00000516533 110 ntBASIC3.94□□□□□ -1.78
CTAGE9A4FU28 RNU6-232P-201ENST00000517144 64 ntBASIC3.94□□□□□ -1.78
CTAGE9A4FU28 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.94□□□□□ -1.78
CTAGE9A4FU28 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.94□□□□□ -1.78
CTAGE9A4FU28 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.94□□□□□ -1.78
CTAGE9A4FU28 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.94□□□□□ -1.78
CTAGE9A4FU28 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.94□□□□□ -1.78
CTAGE9A4FU28 AC135279.1-201ENST00000543493 504 ntBASIC3.94□□□□□ -1.78
CTAGE9A4FU28 AC011602.1-201ENST00000546484 331 ntBASIC3.94□□□□□ -1.78
CTAGE9A4FU28 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.94□□□□□ -1.78
CTAGE9A4FU28 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.94□□□□□ -1.78
CTAGE9A4FU28 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.94□□□□□ -1.78
CTAGE9A4FU28 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.94□□□□□ -1.78
CTAGE9A4FU28 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.94□□□□□ -1.78
CTAGE9A4FU28 AC064807.4-201ENST00000607201 407 ntBASIC3.94□□□□□ -1.78
CTAGE9A4FU28 RNU4-89P-201ENST00000607443 133 ntBASIC3.94□□□□□ -1.78
CTAGE9A4FU28 AL607023.1-201ENST00000620045 248 ntBASIC3.94□□□□□ -1.78
CTAGE9A4FU28 AC091931.1-201ENST00000623488 728 ntBASIC3.94□□□□□ -1.78
CTAGE9A4FU28 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.94□□□□□ -1.78
CTAGE9A4FU28 MKKS-204ENST00000639674 192 ntBASIC3.94□□□□□ -1.78
CTAGE9A4FU28 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CTAGE9A4FU28 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms