Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC4.87□□□□□ -1.63
SHISA3A0PJX4 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
SHISA3A0PJX4 AL442128.2-201ENST00000620246 1824 ntBASIC4.87□□□□□ -1.63
SHISA3A0PJX4 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
SHISA3A0PJX4 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SHISA3A0PJX4 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
SHISA3A0PJX4 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.87□□□□□ -1.63
SHISA3A0PJX4 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SHISA3A0PJX4 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SHISA3A0PJX4 MTND4P1-201ENST00000457501 1466 ntBASIC4.87□□□□□ -1.63
SHISA3A0PJX4 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SHISA3A0PJX4 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC4.86□□□□□ -1.63
SHISA3A0PJX4 ZNF519P1-201ENST00000449011 1626 ntBASIC4.86□□□□□ -1.63
SHISA3A0PJX4 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.86□□□□□ -1.63
SHISA3A0PJX4 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
SHISA3A0PJX4 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SHISA3A0PJX4 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.86□□□□□ -1.63
SHISA3A0PJX4 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.86□□□□□ -1.63
SHISA3A0PJX4 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SHISA3A0PJX4 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.86□□□□□ -1.63
SHISA3A0PJX4 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
SHISA3A0PJX4 ZNF33CP-201ENST00000432492 2030 ntBASIC4.86□□□□□ -1.63
SHISA3A0PJX4 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SHISA3A0PJX4 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SHISA3A0PJX4 AL159987.1-201ENST00000347911 293 ntBASIC4.86□□□□□ -1.63
SHISA3A0PJX4 RNU6-1115P-201ENST00000362490 106 ntBASIC4.86□□□□□ -1.63
SHISA3A0PJX4 RN7SKP171-201ENST00000364417 303 ntBASIC4.86□□□□□ -1.63
SHISA3A0PJX4 PKIB-203ENST00000368446 556 ntTSL 2 BASIC4.86□□□□□ -1.63
SHISA3A0PJX4 RNU6-637P-201ENST00000384050 107 ntBASIC4.86□□□□□ -1.63
SHISA3A0PJX4 RPS12P24-201ENST00000412619 387 ntBASIC4.86□□□□□ -1.63
SHISA3A0PJX4 GJA6P-201ENST00000415117 1042 ntBASIC4.86□□□□□ -1.63
SHISA3A0PJX4 RPS12P5-201ENST00000423449 371 ntBASIC4.86□□□□□ -1.63
SHISA3A0PJX4 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.86□□□□□ -1.63
SHISA3A0PJX4 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.86□□□□□ -1.63
SHISA3A0PJX4 RPL21P112-201ENST00000434403 463 ntBASIC4.86□□□□□ -1.63
SHISA3A0PJX4 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.86□□□□□ -1.63
SHISA3A0PJX4 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
SHISA3A0PJX4 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.86□□□□□ -1.63
SHISA3A0PJX4 AC245028.2-201ENST00000458673 253 ntBASIC4.86□□□□□ -1.63
SHISA3A0PJX4 SCARNA18-201ENST00000459004 134 ntBASIC4.86□□□□□ -1.63
SHISA3A0PJX4 RPL21P93-201ENST00000480465 489 ntBASIC4.86□□□□□ -1.63
SHISA3A0PJX4 RN7SL432P-201ENST00000484057 298 ntBASIC4.86□□□□□ -1.63
SHISA3A0PJX4 AC004453.1-201ENST00000487895 408 ntBASIC4.86□□□□□ -1.63
SHISA3A0PJX4 RPL23AP55-201ENST00000498163 452 ntBASIC4.86□□□□□ -1.63
SHISA3A0PJX4 AC008526.1-201ENST00000509149 338 ntBASIC4.86□□□□□ -1.63
SHISA3A0PJX4 AC011411.1-201ENST00000509592 876 ntBASIC4.86□□□□□ -1.63
SHISA3A0PJX4 AC074255.1-201ENST00000511259 501 ntBASIC4.86□□□□□ -1.63
SHISA3A0PJX4 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC4.86□□□□□ -1.63
SHISA3A0PJX4 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC4.86□□□□□ -1.63
SHISA3A0PJX4 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.86□□□□□ -1.63
SHISA3A0PJX4 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC4.86□□□□□ -1.63
SHISA3A0PJX4 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.86□□□□□ -1.63
SHISA3A0PJX4 AL122125.1-201ENST00000616999 600 ntBASIC4.86□□□□□ -1.63
SHISA3A0PJX4 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC4.86□□□□□ -1.63
SHISA3A0PJX4 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC4.86□□□□□ -1.63
SHISA3A0PJX4 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC4.86□□□□□ -1.63
SHISA3A0PJX4 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC4.86□□□□□ -1.63
SHISA3A0PJX4 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
SHISA3A0PJX4 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC4.86□□□□□ -1.63
SHISA3A0PJX4 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SHISA3A0PJX4 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SHISA3A0PJX4 AC114947.2-201ENST00000565748 2125 ntBASIC4.85□□□□□ -1.63
SHISA3A0PJX4 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC4.85□□□□□ -1.63
SHISA3A0PJX4 AC020633.1-201ENST00000468439 2247 ntBASIC4.85□□□□□ -1.63
SHISA3A0PJX4 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SHISA3A0PJX4 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.85□□□□□ -1.63
SHISA3A0PJX4 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.85□□□□□ -1.63
SHISA3A0PJX4 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SHISA3A0PJX4 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SHISA3A0PJX4 RNA5SP500-201ENST00000364486 119 ntBASIC4.85□□□□□ -1.63
SHISA3A0PJX4 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
SHISA3A0PJX4 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SHISA3A0PJX4 RNU6-1032P-201ENST00000384100 107 ntBASIC4.85□□□□□ -1.63
SHISA3A0PJX4 RNU6-310P-201ENST00000384655 107 ntBASIC4.85□□□□□ -1.63
SHISA3A0PJX4 MIR568-201ENST00000385036 95 ntBASIC4.85□□□□□ -1.63
SHISA3A0PJX4 RNU6-328P-201ENST00000390887 106 ntBASIC4.85□□□□□ -1.63
SHISA3A0PJX4 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
SHISA3A0PJX4 RPL30P2-201ENST00000414021 291 ntBASIC4.85□□□□□ -1.63
SHISA3A0PJX4 MRPL53P1-201ENST00000414323 319 ntBASIC4.85□□□□□ -1.63
SHISA3A0PJX4 AC009302.1-201ENST00000417147 390 ntBASIC4.85□□□□□ -1.63
SHISA3A0PJX4 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.85□□□□□ -1.63
SHISA3A0PJX4 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC4.85□□□□□ -1.63
SHISA3A0PJX4 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC4.85□□□□□ -1.63
SHISA3A0PJX4 PDSS1P1-201ENST00000422953 1114 ntBASIC4.85□□□□□ -1.63
SHISA3A0PJX4 AC018865.2-201ENST00000423631 129 ntBASIC4.85□□□□□ -1.63
SHISA3A0PJX4 RAC1P6-201ENST00000423911 575 ntBASIC4.85□□□□□ -1.63
SHISA3A0PJX4 EIF5AP4-201ENST00000441206 465 ntBASIC4.85□□□□□ -1.63
SHISA3A0PJX4 AC019185.1-201ENST00000442718 389 ntBASIC4.85□□□□□ -1.63
SHISA3A0PJX4 RPS15AP27-201ENST00000449183 343 ntBASIC4.85□□□□□ -1.63
SHISA3A0PJX4 AL162388.1-201ENST00000450912 352 ntBASIC4.85□□□□□ -1.63
SHISA3A0PJX4 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.85□□□□□ -1.63
SHISA3A0PJX4 AC116533.1-201ENST00000459748 321 ntBASIC4.85□□□□□ -1.63
SHISA3A0PJX4 TRBV1-201ENST00000476502 284 ntBASIC4.85□□□□□ -1.63
SHISA3A0PJX4 RPL32P33-201ENST00000487023 394 ntBASIC4.85□□□□□ -1.63
SHISA3A0PJX4 RN7SL362P-201ENST00000494228 267 ntBASIC4.85□□□□□ -1.63
SHISA3A0PJX4 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC4.85□□□□□ -1.63
SHISA3A0PJX4 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SHISA3A0PJX4 AC008638.1-201ENST00000506035 866 ntBASIC4.85□□□□□ -1.63
SHISA3A0PJX4 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SHISA3A0PJX4 SCARNA20.4-201ENST00000516969 131 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms