Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
HLA-DRB4X5D2U9 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.2□□□□□ -2.06
HLA-DRB4X5D2U9 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.2□□□□□ -2.06
HLA-DRB4X5D2U9 RPS17P11-201ENST00000474297 293 ntBASIC2.2□□□□□ -2.06
HLA-DRB4X5D2U9 ACTR6P1-201ENST00000514311 1104 ntBASIC2.2□□□□□ -2.06
HLA-DRB4X5D2U9 MTND5P4-201ENST00000514978 288 ntBASIC2.2□□□□□ -2.06
HLA-DRB4X5D2U9 AP004371.1-201ENST00000525240 214 ntBASIC2.2□□□□□ -2.06
HLA-DRB4X5D2U9 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.2□□□□□ -2.06
HLA-DRB4X5D2U9 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.2□□□□□ -2.06
HLA-DRB4X5D2U9 HSPE1P20-201ENST00000538133 289 ntBASIC2.2□□□□□ -2.06
HLA-DRB4X5D2U9 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.2□□□□□ -2.06
HLA-DRB4X5D2U9 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
HLA-DRB4X5D2U9 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.2□□□□□ -2.06
HLA-DRB4X5D2U9 AC125611.2-201ENST00000551907 647 ntBASIC2.2□□□□□ -2.06
HLA-DRB4X5D2U9 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC2.2□□□□□ -2.06
HLA-DRB4X5D2U9 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.2□□□□□ -2.06
HLA-DRB4X5D2U9 MIR8057-201ENST00000620957 69 ntBASIC2.2□□□□□ -2.06
HLA-DRB4X5D2U9 AC007318.2-201ENST00000620999 243 ntBASIC2.2□□□□□ -2.06
HLA-DRB4X5D2U9 AC079228.1-201ENST00000624774 1049 ntBASIC2.2□□□□□ -2.06
HLA-DRB4X5D2U9 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.2□□□□□ -2.06
HLA-DRB4X5D2U9 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
HLA-DRB4X5D2U9 MIR3651-201ENST00000630427 90 ntBASIC2.2□□□□□ -2.06
HLA-DRB4X5D2U9 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.2□□□□□ -2.06
HLA-DRB4X5D2U9 ASNSP3-201ENST00000451989 1306 ntBASIC2.19□□□□□ -2.06
HLA-DRB4X5D2U9 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
HLA-DRB4X5D2U9 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.19□□□□□ -2.06
HLA-DRB4X5D2U9 MIR422A-201ENST00000362286 90 ntBASIC2.19□□□□□ -2.06
HLA-DRB4X5D2U9 SNORA14A-201ENST00000364773 135 ntBASIC2.19□□□□□ -2.06
HLA-DRB4X5D2U9 RNU4-65P-201ENST00000410473 140 ntBASIC2.19□□□□□ -2.06
HLA-DRB4X5D2U9 RNA5SP492-201ENST00000411330 114 ntBASIC2.19□□□□□ -2.06
HLA-DRB4X5D2U9 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.19□□□□□ -2.06
HLA-DRB4X5D2U9 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.19□□□□□ -2.06
HLA-DRB4X5D2U9 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC2.19□□□□□ -2.06
HLA-DRB4X5D2U9 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.19□□□□□ -2.06
HLA-DRB4X5D2U9 RPS29P6-201ENST00000438196 145 ntBASIC2.19□□□□□ -2.06
HLA-DRB4X5D2U9 AL606490.8-201ENST00000441624 319 ntBASIC2.19□□□□□ -2.06
HLA-DRB4X5D2U9 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.19□□□□□ -2.06
HLA-DRB4X5D2U9 UBBP3-201ENST00000445497 241 ntBASIC2.19□□□□□ -2.06
HLA-DRB4X5D2U9 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC2.19□□□□□ -2.06
HLA-DRB4X5D2U9 AC112492.1-201ENST00000449607 712 ntBASIC2.19□□□□□ -2.06
HLA-DRB4X5D2U9 HMGB1P5-202ENST00000451497 985 ntBASIC2.19□□□□□ -2.06
HLA-DRB4X5D2U9 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.19□□□□□ -2.06
HLA-DRB4X5D2U9 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.19□□□□□ -2.06
HLA-DRB4X5D2U9 AP001992.1-205ENST00000462248 379 ntBASIC2.19□□□□□ -2.06
HLA-DRB4X5D2U9 AC017015.1-201ENST00000477387 286 ntBASIC2.19□□□□□ -2.06
HLA-DRB4X5D2U9 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.19□□□□□ -2.06
HLA-DRB4X5D2U9 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.19□□□□□ -2.06
HLA-DRB4X5D2U9 HMGB1P22-201ENST00000505315 124 ntBASIC2.19□□□□□ -2.06
HLA-DRB4X5D2U9 AC111000.2-201ENST00000507775 550 ntBASIC2.19□□□□□ -2.06
HLA-DRB4X5D2U9 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.19□□□□□ -2.06
HLA-DRB4X5D2U9 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.19□□□□□ -2.06
HLA-DRB4X5D2U9 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC2.19□□□□□ -2.06
HLA-DRB4X5D2U9 AC009812.2-201ENST00000517657 457 ntBASIC2.19□□□□□ -2.06
HLA-DRB4X5D2U9 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.19□□□□□ -2.06
HLA-DRB4X5D2U9 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
HLA-DRB4X5D2U9 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC2.19□□□□□ -2.06
HLA-DRB4X5D2U9 AL121594.4-201ENST00000556211 1196 ntBASIC2.19□□□□□ -2.06
HLA-DRB4X5D2U9 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
HLA-DRB4X5D2U9 AADACP1-206ENST00000561502 1193 ntBASIC2.19□□□□□ -2.06
HLA-DRB4X5D2U9 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
HLA-DRB4X5D2U9 AC012468.1-201ENST00000604888 430 ntBASIC2.19□□□□□ -2.06
HLA-DRB4X5D2U9 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
HLA-DRB4X5D2U9 CYCSP41-201ENST00000616920 296 ntBASIC2.19□□□□□ -2.06
HLA-DRB4X5D2U9 AC002076.2-201ENST00000617362 122 ntBASIC2.19□□□□□ -2.06
HLA-DRB4X5D2U9 AC006249.1-201ENST00000621223 471 ntBASIC2.19□□□□□ -2.06
HLA-DRB4X5D2U9 AC010338.1-201ENST00000621823 717 ntBASIC2.19□□□□□ -2.06
HLA-DRB4X5D2U9 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.19□□□□□ -2.06
HLA-DRB4X5D2U9 GABRG2-229ENST00000641017 3628 ntBASIC2.19□□□□□ -2.06
HLA-DRB4X5D2U9 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
HLA-DRB4X5D2U9 RNU6-851P-201ENST00000384565 107 ntBASIC2.18□□□□□ -2.06
HLA-DRB4X5D2U9 AL353692.2-201ENST00000407054 335 ntBASIC2.18□□□□□ -2.06
HLA-DRB4X5D2U9 MIR1289-1-201ENST00000408836 144 ntBASIC2.18□□□□□ -2.06
HLA-DRB4X5D2U9 AL024507.1-201ENST00000412741 274 ntBASIC2.18□□□□□ -2.06
HLA-DRB4X5D2U9 SMC4P1-201ENST00000414479 527 ntBASIC2.18□□□□□ -2.06
HLA-DRB4X5D2U9 YPEL5P1-201ENST00000419731 367 ntBASIC2.18□□□□□ -2.06
HLA-DRB4X5D2U9 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.18□□□□□ -2.06
HLA-DRB4X5D2U9 AC073310.1-201ENST00000423226 1033 ntBASIC2.18□□□□□ -2.06
HLA-DRB4X5D2U9 AC005517.2-201ENST00000424673 553 ntBASIC2.18□□□□□ -2.06
HLA-DRB4X5D2U9 AL445528.1-201ENST00000426330 420 ntBASIC2.18□□□□□ -2.06
HLA-DRB4X5D2U9 AC022018.1-201ENST00000430685 241 ntBASIC2.18□□□□□ -2.06
HLA-DRB4X5D2U9 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC2.18□□□□□ -2.06
HLA-DRB4X5D2U9 AP000705.1-201ENST00000454567 350 ntBASIC2.18□□□□□ -2.06
HLA-DRB4X5D2U9 RPL21P41-201ENST00000459863 264 ntBASIC2.18□□□□□ -2.06
HLA-DRB4X5D2U9 AC087879.1-201ENST00000474343 374 ntBASIC2.18□□□□□ -2.06
HLA-DRB4X5D2U9 AC090525.1-201ENST00000479116 478 ntBASIC2.18□□□□□ -2.06
HLA-DRB4X5D2U9 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.18□□□□□ -2.06
HLA-DRB4X5D2U9 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC2.18□□□□□ -2.06
HLA-DRB4X5D2U9 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.18□□□□□ -2.06
HLA-DRB4X5D2U9 AC034244.2-201ENST00000514668 858 ntBASIC2.18□□□□□ -2.06
HLA-DRB4X5D2U9 FAM60DP-201ENST00000524174 632 ntBASIC2.18□□□□□ -2.06
HLA-DRB4X5D2U9 AC019227.1-201ENST00000526902 510 ntBASIC2.18□□□□□ -2.06
HLA-DRB4X5D2U9 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.18□□□□□ -2.06
HLA-DRB4X5D2U9 AC034105.3-201ENST00000565294 442 ntBASIC2.18□□□□□ -2.06
HLA-DRB4X5D2U9 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
HLA-DRB4X5D2U9 MIR548Y-201ENST00000582739 110 ntBASIC2.18□□□□□ -2.06
HLA-DRB4X5D2U9 MIR4325-201ENST00000583049 90 ntBASIC2.18□□□□□ -2.06
HLA-DRB4X5D2U9 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC2.18□□□□□ -2.06
HLA-DRB4X5D2U9 AC008962.1-201ENST00000605729 304 ntBASIC2.18□□□□□ -2.06
HLA-DRB4X5D2U9 AL110115.1-201ENST00000614396 364 ntBASIC2.18□□□□□ -2.06
HLA-DRB4X5D2U9 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms