Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
PCDHAC2Q9Y5I4 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
PCDHAC2Q9Y5I4 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.22□□□□□ -1.73
PCDHAC2Q9Y5I4 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PCDHAC2Q9Y5I4 RNA5SP374-201ENST00000362939 125 ntBASIC4.22□□□□□ -1.73
PCDHAC2Q9Y5I4 Y_RNA.192-201ENST00000363977 102 ntBASIC4.22□□□□□ -1.73
PCDHAC2Q9Y5I4 SNORA51.12-201ENST00000384448 134 ntBASIC4.22□□□□□ -1.73
PCDHAC2Q9Y5I4 AL356131.1-201ENST00000405826 414 ntBASIC4.22□□□□□ -1.73
PCDHAC2Q9Y5I4 RN7SKP53-201ENST00000411337 315 ntBASIC4.22□□□□□ -1.73
PCDHAC2Q9Y5I4 OR1AA1P-201ENST00000419597 916 ntBASIC4.22□□□□□ -1.73
PCDHAC2Q9Y5I4 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.22□□□□□ -1.73
PCDHAC2Q9Y5I4 GTF2IP23-201ENST00000423746 351 ntBASIC4.22□□□□□ -1.73
PCDHAC2Q9Y5I4 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.22□□□□□ -1.73
PCDHAC2Q9Y5I4 AC005345.1-201ENST00000431868 217 ntBASIC4.22□□□□□ -1.73
PCDHAC2Q9Y5I4 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.22□□□□□ -1.73
PCDHAC2Q9Y5I4 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
PCDHAC2Q9Y5I4 AL121877.1-201ENST00000453704 622 ntBASIC4.22□□□□□ -1.73
PCDHAC2Q9Y5I4 RN7SL807P-201ENST00000470923 297 ntBASIC4.22□□□□□ -1.73
PCDHAC2Q9Y5I4 DYNLL1P6-201ENST00000503440 264 ntBASIC4.22□□□□□ -1.73
PCDHAC2Q9Y5I4 AC091435.1-201ENST00000505442 584 ntBASIC4.22□□□□□ -1.73
PCDHAC2Q9Y5I4 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PCDHAC2Q9Y5I4 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.22□□□□□ -1.73
PCDHAC2Q9Y5I4 VWA8P1-201ENST00000510889 176 ntBASIC4.22□□□□□ -1.73
PCDHAC2Q9Y5I4 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC4.22□□□□□ -1.73
PCDHAC2Q9Y5I4 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.22□□□□□ -1.73
PCDHAC2Q9Y5I4 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.22□□□□□ -1.73
PCDHAC2Q9Y5I4 AC008562.1-201ENST00000521763 330 ntBASIC4.22□□□□□ -1.73
PCDHAC2Q9Y5I4 MTCO1P47-201ENST00000523889 1271 ntBASIC4.22□□□□□ -1.73
PCDHAC2Q9Y5I4 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC4.22□□□□□ -1.73
PCDHAC2Q9Y5I4 AP003461.1-201ENST00000528866 78 ntBASIC4.22□□□□□ -1.73
PCDHAC2Q9Y5I4 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PCDHAC2Q9Y5I4 AL121766.1-201ENST00000547436 487 ntBASIC4.22□□□□□ -1.73
PCDHAC2Q9Y5I4 AC125611.1-201ENST00000549563 229 ntBASIC4.22□□□□□ -1.73
PCDHAC2Q9Y5I4 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.22□□□□□ -1.73
PCDHAC2Q9Y5I4 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC4.22□□□□□ -1.73
PCDHAC2Q9Y5I4 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.22□□□□□ -1.73
PCDHAC2Q9Y5I4 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.22□□□□□ -1.73
PCDHAC2Q9Y5I4 AC067852.3-201ENST00000589177 561 ntBASIC4.22□□□□□ -1.73
PCDHAC2Q9Y5I4 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.22□□□□□ -1.73
PCDHAC2Q9Y5I4 AC121247.2-201ENST00000604776 136 ntBASIC4.22□□□□□ -1.73
PCDHAC2Q9Y5I4 AC010200.2-201ENST00000605098 235 ntBASIC4.22□□□□□ -1.73
PCDHAC2Q9Y5I4 BRDTP1-201ENST00000605735 677 ntBASIC4.22□□□□□ -1.73
PCDHAC2Q9Y5I4 AC011816.2-201ENST00000607089 556 ntBASIC4.22□□□□□ -1.73
PCDHAC2Q9Y5I4 AL355816.1-201ENST00000607951 118 ntBASIC4.22□□□□□ -1.73
PCDHAC2Q9Y5I4 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.22□□□□□ -1.73
PCDHAC2Q9Y5I4 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.22□□□□□ -1.73
PCDHAC2Q9Y5I4 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PCDHAC2Q9Y5I4 AL732618.1-201ENST00000623251 301 ntBASIC4.22□□□□□ -1.73
PCDHAC2Q9Y5I4 AC068620.4-201ENST00000636730 1182 ntBASIC4.22□□□□□ -1.73
PCDHAC2Q9Y5I4 MIR6715B-201ENST00000637172 77 ntBASIC4.22□□□□□ -1.73
PCDHAC2Q9Y5I4 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
PCDHAC2Q9Y5I4 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PCDHAC2Q9Y5I4 AL390862.1-201ENST00000635467 1469 ntBASIC4.22□□□□□ -1.73
PCDHAC2Q9Y5I4 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.22□□□□□ -1.73
PCDHAC2Q9Y5I4 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.73
PCDHAC2Q9Y5I4 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
PCDHAC2Q9Y5I4 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.21□□□□□ -1.73
PCDHAC2Q9Y5I4 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PCDHAC2Q9Y5I4 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
PCDHAC2Q9Y5I4 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PCDHAC2Q9Y5I4 RNU6-157P-201ENST00000383957 107 ntBASIC4.21□□□□□ -1.74
PCDHAC2Q9Y5I4 MIR16-1-201ENST00000385271 89 ntBASIC4.21□□□□□ -1.74
PCDHAC2Q9Y5I4 AL603766.1-201ENST00000407763 664 ntBASIC4.21□□□□□ -1.74
PCDHAC2Q9Y5I4 AL390023.1-201ENST00000428836 262 ntBASIC4.21□□□□□ -1.74
PCDHAC2Q9Y5I4 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.21□□□□□ -1.74
PCDHAC2Q9Y5I4 PPIAP17-201ENST00000438507 471 ntBASIC4.21□□□□□ -1.74
PCDHAC2Q9Y5I4 HMGB1P48-201ENST00000446155 598 ntBASIC4.21□□□□□ -1.74
PCDHAC2Q9Y5I4 RSL24D1P3-201ENST00000449255 495 ntBASIC4.21□□□□□ -1.74
PCDHAC2Q9Y5I4 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC4.21□□□□□ -1.74
PCDHAC2Q9Y5I4 NDUFS5P3-201ENST00000450668 321 ntBASIC4.21□□□□□ -1.74
PCDHAC2Q9Y5I4 RPS27AP8-201ENST00000452665 445 ntBASIC4.21□□□□□ -1.74
PCDHAC2Q9Y5I4 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHAC2Q9Y5I4 AC011979.1-201ENST00000472300 483 ntBASIC4.21□□□□□ -1.74
PCDHAC2Q9Y5I4 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.21□□□□□ -1.74
PCDHAC2Q9Y5I4 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHAC2Q9Y5I4 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHAC2Q9Y5I4 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHAC2Q9Y5I4 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHAC2Q9Y5I4 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHAC2Q9Y5I4 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHAC2Q9Y5I4 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHAC2Q9Y5I4 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.21□□□□□ -1.74
PCDHAC2Q9Y5I4 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.21□□□□□ -1.74
PCDHAC2Q9Y5I4 RPL21P12-201ENST00000559810 515 ntBASIC4.21□□□□□ -1.74
PCDHAC2Q9Y5I4 AC084757.1-201ENST00000559987 490 ntBASIC4.21□□□□□ -1.74
PCDHAC2Q9Y5I4 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHAC2Q9Y5I4 MIR3912-201ENST00000577566 105 ntBASIC4.21□□□□□ -1.74
PCDHAC2Q9Y5I4 MIR4666A-201ENST00000580160 79 ntBASIC4.21□□□□□ -1.74
PCDHAC2Q9Y5I4 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHAC2Q9Y5I4 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHAC2Q9Y5I4 AL137843.1-201ENST00000605078 385 ntBASIC4.21□□□□□ -1.74
PCDHAC2Q9Y5I4 AC072039.2-201ENST00000608883 439 ntBASIC4.21□□□□□ -1.74
PCDHAC2Q9Y5I4 AL139418.1-201ENST00000613613 177 ntBASIC4.21□□□□□ -1.74
PCDHAC2Q9Y5I4 AC105227.2-201ENST00000615075 605 ntBASIC4.21□□□□□ -1.74
PCDHAC2Q9Y5I4 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.21□□□□□ -1.74
PCDHAC2Q9Y5I4 AL157770.1-201ENST00000623049 439 ntBASIC4.21□□□□□ -1.74
PCDHAC2Q9Y5I4 AC007490.1-201ENST00000624321 703 ntBASIC4.21□□□□□ -1.74
PCDHAC2Q9Y5I4 AC091905.1-201ENST00000624400 311 ntBASIC4.21□□□□□ -1.74
PCDHAC2Q9Y5I4 AL445523.1-201ENST00000451184 1362 ntBASIC4.21□□□□□ -1.74
PCDHAC2Q9Y5I4 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms