Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 RNU6-1249P-201ENST00000363237 111 ntBASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 RNA5SP235-201ENST00000365411 114 ntBASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 SNORD82-201ENST00000365530 70 ntBASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 MIR634-201ENST00000385208 97 ntBASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 SNORA40.2-201ENST00000390847 128 ntBASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 AL136310.1-201ENST00000404926 654 ntBASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 RNU2-28P-201ENST00000410457 189 ntBASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 AC007390.1-201ENST00000415722 356 ntBASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 AC012065.2-201ENST00000421295 375 ntBASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 AL159987.2-201ENST00000432754 307 ntBASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 SETP5-201ENST00000437270 562 ntBASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 USP9YP22-201ENST00000438971 294 ntBASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 SNORA71B-202ENST00000439232 272 ntBASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 AL662791.1-201ENST00000441992 928 ntBASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 AL009048.1-201ENST00000450437 298 ntBASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 AC007967.1-201ENST00000455422 1159 ntBASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 AL136126.1-201ENST00000473603 402 ntBASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 RPL23AP44-201ENST00000482216 473 ntBASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 RPL32P34-201ENST00000486380 400 ntBASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 AL024509.2-201ENST00000493462 493 ntBASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 HMGB3P15-201ENST00000507326 574 ntBASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 AC104619.4-201ENST00000510773 249 ntBASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 RNU6-415P-201ENST00000516252 97 ntBASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 SNORA48.10-201ENST00000516965 160 ntBASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 AC008127.2-201ENST00000549925 1075 ntBASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 AC022968.1-201ENST00000567372 442 ntBASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 VN1R83P-201ENST00000595685 445 ntBASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 RNU4-5P-201ENST00000607255 135 ntBASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 AC006329.2-201ENST00000611491 394 ntBASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 XIST_intron.1-201ENST00000619444 68 ntBASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 AC233309.1-201ENST00000619522 751 ntBASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 LINC02211-204ENST00000642024 1070 ntBASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.74□□□□□ -1.81
PCDHGA1Q9Y5H4 AL672296.1-201ENST00000427780 2158 ntBASIC3.73□□□□□ -1.81
PCDHGA1Q9Y5H4 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PCDHGA1Q9Y5H4 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
PCDHGA1Q9Y5H4 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.73□□□□□ -1.81
PCDHGA1Q9Y5H4 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PCDHGA1Q9Y5H4 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.73□□□□□ -1.81
PCDHGA1Q9Y5H4 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PCDHGA1Q9Y5H4 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.73□□□□□ -1.81
PCDHGA1Q9Y5H4 RNU6-50P-201ENST00000362356 103 ntBASIC3.73□□□□□ -1.81
PCDHGA1Q9Y5H4 RNU6-263P-201ENST00000363811 107 ntBASIC3.73□□□□□ -1.81
PCDHGA1Q9Y5H4 SNORA72.3-201ENST00000365074 132 ntBASIC3.73□□□□□ -1.81
PCDHGA1Q9Y5H4 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
PCDHGA1Q9Y5H4 MIR218-2-201ENST00000385006 110 ntBASIC3.73□□□□□ -1.81
PCDHGA1Q9Y5H4 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
PCDHGA1Q9Y5H4 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.73□□□□□ -1.81
PCDHGA1Q9Y5H4 MTATP6P20-201ENST00000414147 562 ntBASIC3.73□□□□□ -1.81
PCDHGA1Q9Y5H4 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PCDHGA1Q9Y5H4 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.73□□□□□ -1.81
PCDHGA1Q9Y5H4 MOB1AP1-201ENST00000430903 535 ntBASIC3.73□□□□□ -1.81
PCDHGA1Q9Y5H4 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.73□□□□□ -1.81
PCDHGA1Q9Y5H4 NANOGP2-201ENST00000435391 727 ntBASIC3.73□□□□□ -1.81
PCDHGA1Q9Y5H4 AC083863.1-201ENST00000438811 231 ntBASIC3.73□□□□□ -1.81
PCDHGA1Q9Y5H4 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.73□□□□□ -1.81
PCDHGA1Q9Y5H4 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PCDHGA1Q9Y5H4 AL589880.1-201ENST00000448271 287 ntBASIC3.73□□□□□ -1.81
PCDHGA1Q9Y5H4 SNORD105B-201ENST00000458770 79 ntBASIC3.73□□□□□ -1.81
PCDHGA1Q9Y5H4 HMGB1P22-201ENST00000505315 124 ntBASIC3.73□□□□□ -1.81
PCDHGA1Q9Y5H4 AC017037.1-201ENST00000508460 471 ntBASIC3.73□□□□□ -1.81
PCDHGA1Q9Y5H4 MIR2114-201ENST00000516645 80 ntBASIC3.73□□□□□ -1.81
PCDHGA1Q9Y5H4 OR7E13P-201ENST00000526052 910 ntBASIC3.73□□□□□ -1.81
PCDHGA1Q9Y5H4 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PCDHGA1Q9Y5H4 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.73□□□□□ -1.81
PCDHGA1Q9Y5H4 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.73□□□□□ -1.81
PCDHGA1Q9Y5H4 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.73□□□□□ -1.81
PCDHGA1Q9Y5H4 AC090502.2-201ENST00000549267 280 ntBASIC3.73□□□□□ -1.81
PCDHGA1Q9Y5H4 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.73□□□□□ -1.81
PCDHGA1Q9Y5H4 AL049838.1-201ENST00000563647 981 ntBASIC3.73□□□□□ -1.81
PCDHGA1Q9Y5H4 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PCDHGA1Q9Y5H4 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.73□□□□□ -1.81
PCDHGA1Q9Y5H4 AL031985.2-201ENST00000600955 480 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms