Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.73□□□□□ -1.81
SHANK2Q9UPX8 AC147055.1-201ENST00000509261 750 ntBASIC3.73□□□□□ -1.81
SHANK2Q9UPX8 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.73□□□□□ -1.81
SHANK2Q9UPX8 CKS1BP1-201ENST00000555221 240 ntBASIC3.73□□□□□ -1.81
SHANK2Q9UPX8 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.73□□□□□ -1.81
SHANK2Q9UPX8 VN1R79P-201ENST00000593540 513 ntBASIC3.73□□□□□ -1.81
SHANK2Q9UPX8 AC107871.2-201ENST00000612894 502 ntBASIC3.73□□□□□ -1.81
SHANK2Q9UPX8 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SHANK2Q9UPX8 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.72□□□□□ -1.81
SHANK2Q9UPX8 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SHANK2Q9UPX8 AC009487.4-201ENST00000624969 3585 ntBASIC3.72□□□□□ -1.81
SHANK2Q9UPX8 BTF3P7-201ENST00000407097 488 ntBASIC3.72□□□□□ -1.81
SHANK2Q9UPX8 AL034379.1-201ENST00000423216 253 ntBASIC3.72□□□□□ -1.81
SHANK2Q9UPX8 RPL23AP74-201ENST00000437246 471 ntBASIC3.72□□□□□ -1.81
SHANK2Q9UPX8 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.72□□□□□ -1.81
SHANK2Q9UPX8 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.72□□□□□ -1.81
SHANK2Q9UPX8 RPL30P9-201ENST00000465586 330 ntBASIC3.72□□□□□ -1.81
SHANK2Q9UPX8 RPL23AP11-201ENST00000475260 469 ntBASIC3.72□□□□□ -1.81
SHANK2Q9UPX8 OR9N1P-201ENST00000491296 333 ntBASIC3.72□□□□□ -1.81
SHANK2Q9UPX8 AC093331.1-201ENST00000521474 169 ntBASIC3.72□□□□□ -1.81
SHANK2Q9UPX8 AC107918.3-201ENST00000533272 382 ntBASIC3.72□□□□□ -1.81
SHANK2Q9UPX8 AC025260.1-201ENST00000548858 430 ntBASIC3.72□□□□□ -1.81
SHANK2Q9UPX8 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.72□□□□□ -1.81
SHANK2Q9UPX8 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SHANK2Q9UPX8 RNA5SP456-201ENST00000364002 114 ntBASIC3.71□□□□□ -1.82
SHANK2Q9UPX8 RNU2-6P-201ENST00000411404 190 ntBASIC3.71□□□□□ -1.82
SHANK2Q9UPX8 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
SHANK2Q9UPX8 RPL21P71-201ENST00000465598 459 ntBASIC3.71□□□□□ -1.82
SHANK2Q9UPX8 RPL23AP44-201ENST00000482216 473 ntBASIC3.71□□□□□ -1.82
SHANK2Q9UPX8 AC092185.1-201ENST00000491371 97 ntBASIC3.71□□□□□ -1.82
SHANK2Q9UPX8 AC108471.1-201ENST00000513977 287 ntBASIC3.71□□□□□ -1.82
SHANK2Q9UPX8 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
SHANK2Q9UPX8 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.71□□□□□ -1.82
SHANK2Q9UPX8 AC012119.1-201ENST00000603184 222 ntBASIC3.71□□□□□ -1.82
SHANK2Q9UPX8 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SHANK2Q9UPX8 OR10AB1P-202ENST00000641219 1686 ntBASIC3.7□□□□□ -1.82
SHANK2Q9UPX8 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.7□□□□□ -1.82
SHANK2Q9UPX8 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SHANK2Q9UPX8 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SHANK2Q9UPX8 RPS12P2-201ENST00000439728 269 ntBASIC3.7□□□□□ -1.82
SHANK2Q9UPX8 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.7□□□□□ -1.82
SHANK2Q9UPX8 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.7□□□□□ -1.82
SHANK2Q9UPX8 AC009163.5-201ENST00000575421 637 ntBASIC3.7□□□□□ -1.82
SHANK2Q9UPX8 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.7□□□□□ -1.82
SHANK2Q9UPX8 MIR6715B-201ENST00000637172 77 ntBASIC3.7□□□□□ -1.82
SHANK2Q9UPX8 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SHANK2Q9UPX8 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.7□□□□□ -1.82
SHANK2Q9UPX8 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.7□□□□□ -1.82
SHANK2Q9UPX8 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
SHANK2Q9UPX8 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
SHANK2Q9UPX8 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SHANK2Q9UPX8 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.7□□□□□ -1.82
SHANK2Q9UPX8 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.69□□□□□ -1.82
SHANK2Q9UPX8 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
SHANK2Q9UPX8 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
SHANK2Q9UPX8 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.69□□□□□ -1.82
SHANK2Q9UPX8 AC244505.4-201ENST00000434905 287 ntBASIC3.69□□□□□ -1.82
SHANK2Q9UPX8 SSXP5-201ENST00000443473 287 ntBASIC3.69□□□□□ -1.82
SHANK2Q9UPX8 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.69□□□□□ -1.82
SHANK2Q9UPX8 RN7SL499P-201ENST00000481141 276 ntBASIC3.69□□□□□ -1.82
SHANK2Q9UPX8 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.69□□□□□ -1.82
SHANK2Q9UPX8 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.69□□□□□ -1.82
SHANK2Q9UPX8 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.69□□□□□ -1.82
SHANK2Q9UPX8 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.69□□□□□ -1.82
SHANK2Q9UPX8 AP001004.1-201ENST00000582468 324 ntBASIC3.69□□□□□ -1.82
SHANK2Q9UPX8 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.69□□□□□ -1.82
SHANK2Q9UPX8 MIR1291-201ENST00000627649 87 ntBASIC3.69□□□□□ -1.82
SHANK2Q9UPX8 AL133412.1-201ENST00000380194 2992 ntBASIC3.69□□□□□ -1.82
SHANK2Q9UPX8 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SHANK2Q9UPX8 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SHANK2Q9UPX8 EXOC5P1-201ENST00000510543 1969 ntBASIC3.68□□□□□ -1.82
SHANK2Q9UPX8 Y_RNA.796-201ENST00000364268 102 ntBASIC3.68□□□□□ -1.82
SHANK2Q9UPX8 Y_RNA.799-201ENST00000364992 102 ntBASIC3.68□□□□□ -1.82
SHANK2Q9UPX8 AIMP1P1-201ENST00000418670 937 ntBASIC3.68□□□□□ -1.82
SHANK2Q9UPX8 RN7SL636P-201ENST00000497504 294 ntBASIC3.68□□□□□ -1.82
SHANK2Q9UPX8 POU5F1P7-201ENST00000508759 541 ntBASIC3.68□□□□□ -1.82
SHANK2Q9UPX8 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SHANK2Q9UPX8 SNORA31.1-201ENST00000515993 133 ntBASIC3.68□□□□□ -1.82
SHANK2Q9UPX8 SNORA31.5-201ENST00000516190 133 ntBASIC3.68□□□□□ -1.82
SHANK2Q9UPX8 RNA5SP76-201ENST00000516277 87 ntBASIC3.68□□□□□ -1.82
SHANK2Q9UPX8 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.68□□□□□ -1.82
SHANK2Q9UPX8 OR7K1P-201ENST00000546439 926 ntBASIC3.68□□□□□ -1.82
SHANK2Q9UPX8 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.68□□□□□ -1.82
SHANK2Q9UPX8 NRBF2P1-201ENST00000587407 859 ntBASIC3.68□□□□□ -1.82
SHANK2Q9UPX8 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.68□□□□□ -1.82
SHANK2Q9UPX8 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.67□□□□□ -1.82
SHANK2Q9UPX8 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.67□□□□□ -1.82
SHANK2Q9UPX8 RNU6-253P-201ENST00000384730 105 ntBASIC3.67□□□□□ -1.82
SHANK2Q9UPX8 EIF5P1-201ENST00000400019 1231 ntBASIC3.67□□□□□ -1.82
SHANK2Q9UPX8 AL162578.1-201ENST00000406202 378 ntBASIC3.67□□□□□ -1.82
SHANK2Q9UPX8 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SHANK2Q9UPX8 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.67□□□□□ -1.82
SHANK2Q9UPX8 AC096638.1-201ENST00000444678 216 ntBASIC3.67□□□□□ -1.82
SHANK2Q9UPX8 AC103975.1-201ENST00000482506 483 ntBASIC3.67□□□□□ -1.82
SHANK2Q9UPX8 RPL23AP70-201ENST00000483361 460 ntBASIC3.67□□□□□ -1.82
SHANK2Q9UPX8 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.67□□□□□ -1.82
SHANK2Q9UPX8 AC008716.1-201ENST00000511084 513 ntBASIC3.67□□□□□ -1.82
SHANK2Q9UPX8 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.67□□□□□ -1.82
SHANK2Q9UPX8 AC069234.5-201ENST00000611056 416 ntBASIC3.67□□□□□ -1.82
SHANK2Q9UPX8 VN1R9P-201ENST00000614184 867 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms