Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
PDZRN3Q9UPQ7 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
PDZRN3Q9UPQ7 AC020656.2-201ENST00000613291 5309 ntBASIC7.06□□□□□ -1.28
PDZRN3Q9UPQ7 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC7.06□□□□□ -1.28
PDZRN3Q9UPQ7 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
PDZRN3Q9UPQ7 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC7.05□□□□□ -1.28
PDZRN3Q9UPQ7 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
PDZRN3Q9UPQ7 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
PDZRN3Q9UPQ7 RNU6-212P-201ENST00000362642 104 ntBASIC7.05□□□□□ -1.28
PDZRN3Q9UPQ7 SUGT1P1-201ENST00000379514 476 ntBASIC7.05□□□□□ -1.28
PDZRN3Q9UPQ7 RNU6-1117P-201ENST00000384525 104 ntBASIC7.05□□□□□ -1.28
PDZRN3Q9UPQ7 Y_RNA.539-201ENST00000384635 107 ntBASIC7.05□□□□□ -1.28
PDZRN3Q9UPQ7 RNU6-606P-201ENST00000384721 111 ntBASIC7.05□□□□□ -1.28
PDZRN3Q9UPQ7 MIR551A-201ENST00000385042 96 ntBASIC7.05□□□□□ -1.28
PDZRN3Q9UPQ7 AC013404.1-201ENST00000413068 249 ntBASIC7.05□□□□□ -1.28
PDZRN3Q9UPQ7 AL354766.1-201ENST00000423396 542 ntBASIC7.05□□□□□ -1.28
PDZRN3Q9UPQ7 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC7.05□□□□□ -1.28
PDZRN3Q9UPQ7 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
PDZRN3Q9UPQ7 RPL7L1P10-201ENST00000427790 463 ntBASIC7.05□□□□□ -1.28
PDZRN3Q9UPQ7 AP001324.1-201ENST00000428553 399 ntBASIC7.05□□□□□ -1.28
PDZRN3Q9UPQ7 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC7.05□□□□□ -1.28
PDZRN3Q9UPQ7 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC7.05□□□□□ -1.28
PDZRN3Q9UPQ7 RPSAP51-201ENST00000497462 645 ntBASIC7.05□□□□□ -1.28
PDZRN3Q9UPQ7 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC7.05□□□□□ -1.28
PDZRN3Q9UPQ7 AC004062.1-201ENST00000509926 645 ntBASIC7.05□□□□□ -1.28
PDZRN3Q9UPQ7 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC7.05□□□□□ -1.28
PDZRN3Q9UPQ7 AC097486.1-201ENST00000515331 210 ntBASIC7.05□□□□□ -1.28
PDZRN3Q9UPQ7 RNU5B-3P-201ENST00000516601 115 ntBASIC7.05□□□□□ -1.28
PDZRN3Q9UPQ7 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC7.05□□□□□ -1.28
PDZRN3Q9UPQ7 AC022616.6-201ENST00000520479 119 ntBASIC7.05□□□□□ -1.28
PDZRN3Q9UPQ7 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC7.05□□□□□ -1.28
PDZRN3Q9UPQ7 AC093519.1-201ENST00000566109 298 ntBASIC7.05□□□□□ -1.28
PDZRN3Q9UPQ7 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC7.05□□□□□ -1.28
PDZRN3Q9UPQ7 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC7.05□□□□□ -1.28
PDZRN3Q9UPQ7 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC7.05□□□□□ -1.28
PDZRN3Q9UPQ7 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC7.05□□□□□ -1.28
PDZRN3Q9UPQ7 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC7.05□□□□□ -1.28
PDZRN3Q9UPQ7 NEK3-211ENST00000629912 141 ntTSL 5 BASIC7.05□□□□□ -1.28
PDZRN3Q9UPQ7 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC7.05□□□□□ -1.28
PDZRN3Q9UPQ7 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
PDZRN3Q9UPQ7 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
PDZRN3Q9UPQ7 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC7.05□□□□□ -1.28
PDZRN3Q9UPQ7 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC7.05□□□□□ -1.28
PDZRN3Q9UPQ7 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
PDZRN3Q9UPQ7 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
PDZRN3Q9UPQ7 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
PDZRN3Q9UPQ7 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC7.05□□□□□ -1.28
PDZRN3Q9UPQ7 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
PDZRN3Q9UPQ7 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
PDZRN3Q9UPQ7 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
PDZRN3Q9UPQ7 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
PDZRN3Q9UPQ7 AC016745.2-201ENST00000608834 3443 ntBASIC7.04□□□□□ -1.28
PDZRN3Q9UPQ7 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC7.04□□□□□ -1.28
PDZRN3Q9UPQ7 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PDZRN3Q9UPQ7 ALB-219ENST00000621085 1418 ntTSL 5 BASIC7.04□□□□□ -1.28
PDZRN3Q9UPQ7 AC003985.2-201ENST00000562268 1669 ntBASIC7.04□□□□□ -1.28
PDZRN3Q9UPQ7 PWAR1-201ENST00000624188 2414 ntBASIC7.04□□□□□ -1.28
PDZRN3Q9UPQ7 RNU6-619P-201ENST00000365146 108 ntBASIC7.04□□□□□ -1.28
PDZRN3Q9UPQ7 RNU4-66P-201ENST00000365199 138 ntBASIC7.04□□□□□ -1.28
PDZRN3Q9UPQ7 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
PDZRN3Q9UPQ7 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
PDZRN3Q9UPQ7 RN7SKP266-201ENST00000410232 287 ntBASIC7.04□□□□□ -1.28
PDZRN3Q9UPQ7 RNU2-71P-201ENST00000411395 189 ntBASIC7.04□□□□□ -1.28
PDZRN3Q9UPQ7 AL133482.1-201ENST00000415988 498 ntBASIC7.04□□□□□ -1.28
PDZRN3Q9UPQ7 RAC1P3-201ENST00000416129 580 ntBASIC7.04□□□□□ -1.28
PDZRN3Q9UPQ7 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC7.04□□□□□ -1.28
PDZRN3Q9UPQ7 AC019097.1-201ENST00000424783 735 ntBASIC7.04□□□□□ -1.28
PDZRN3Q9UPQ7 RPL7P2-201ENST00000427639 268 ntBASIC7.04□□□□□ -1.28
PDZRN3Q9UPQ7 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC7.04□□□□□ -1.28
PDZRN3Q9UPQ7 DDX3P2-201ENST00000446138 111 ntBASIC7.04□□□□□ -1.28
PDZRN3Q9UPQ7 SLC31A1P1-201ENST00000451221 567 ntBASIC7.04□□□□□ -1.28
PDZRN3Q9UPQ7 NANOGP10-201ENST00000453325 895 ntBASIC7.04□□□□□ -1.28
PDZRN3Q9UPQ7 AC126389.1-201ENST00000477436 290 ntBASIC7.04□□□□□ -1.28
PDZRN3Q9UPQ7 HIGD1AP5-201ENST00000529959 259 ntBASIC7.04□□□□□ -1.28
PDZRN3Q9UPQ7 AP000857.1-201ENST00000532151 543 ntBASIC7.04□□□□□ -1.28
PDZRN3Q9UPQ7 AP001804.2-201ENST00000533932 910 ntBASIC7.04□□□□□ -1.28
PDZRN3Q9UPQ7 HSPE1P20-201ENST00000538133 289 ntBASIC7.04□□□□□ -1.28
PDZRN3Q9UPQ7 CASC22-201ENST00000569713 386 ntTSL 5 BASIC7.04□□□□□ -1.28
PDZRN3Q9UPQ7 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC7.04□□□□□ -1.28
PDZRN3Q9UPQ7 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC7.04□□□□□ -1.28
PDZRN3Q9UPQ7 XIST-210ENST00000602863 775 ntTSL 3 BASIC7.04□□□□□ -1.28
PDZRN3Q9UPQ7 AC092447.9-201ENST00000603395 144 ntBASIC7.04□□□□□ -1.28
PDZRN3Q9UPQ7 AL354984.3-201ENST00000604803 325 ntBASIC7.04□□□□□ -1.28
PDZRN3Q9UPQ7 AC133644.2-201ENST00000608142 540 ntBASIC7.04□□□□□ -1.28
PDZRN3Q9UPQ7 AC000068.2-201ENST00000608816 460 ntBASIC7.04□□□□□ -1.28
PDZRN3Q9UPQ7 AP002799.1-201ENST00000623552 423 ntBASIC7.04□□□□□ -1.28
PDZRN3Q9UPQ7 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC7.04□□□□□ -1.28
PDZRN3Q9UPQ7 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC7.04□□□□□ -1.28
PDZRN3Q9UPQ7 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC7.04□□□□□ -1.28
PDZRN3Q9UPQ7 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC7.04□□□□□ -1.28
PDZRN3Q9UPQ7 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
PDZRN3Q9UPQ7 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
PDZRN3Q9UPQ7 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PDZRN3Q9UPQ7 OR4F13P-202ENST00000560066 2054 ntBASIC7.04□□□□□ -1.28
PDZRN3Q9UPQ7 SOCS5P3-201ENST00000425115 1576 ntBASIC7.03□□□□□ -1.28
PDZRN3Q9UPQ7 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
PDZRN3Q9UPQ7 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PDZRN3Q9UPQ7 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PDZRN3Q9UPQ7 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PDZRN3Q9UPQ7 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms