Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 AC092435.4-201ENST00000623012 4159 ntBASIC1.12□□□□□ -2.23
MACF1Q9UPN3 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
MACF1Q9UPN3 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC1.12□□□□□ -2.23
MACF1Q9UPN3 TRIM60P8Y-201ENST00000436338 762 ntBASIC1.12□□□□□ -2.23
MACF1Q9UPN3 MTCO3P11-201ENST00000455103 774 ntBASIC1.12□□□□□ -2.23
MACF1Q9UPN3 AC006483.1-201ENST00000487308 313 ntBASIC1.12□□□□□ -2.23
MACF1Q9UPN3 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC1.12□□□□□ -2.23
MACF1Q9UPN3 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC1.12□□□□□ -2.23
MACF1Q9UPN3 AC007621.1-201ENST00000604544 437 ntBASIC1.12□□□□□ -2.23
MACF1Q9UPN3 U4.3-201ENST00000621047 82 ntBASIC1.12□□□□□ -2.23
MACF1Q9UPN3 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
MACF1Q9UPN3 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.11□□□□□ -2.23
MACF1Q9UPN3 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC1.11□□□□□ -2.23
MACF1Q9UPN3 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC1.11□□□□□ -2.23
MACF1Q9UPN3 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
MACF1Q9UPN3 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
MACF1Q9UPN3 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC1.11□□□□□ -2.23
MACF1Q9UPN3 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
MACF1Q9UPN3 RNA5SP205-201ENST00000364653 136 ntBASIC1.11□□□□□ -2.23
MACF1Q9UPN3 Y_RNA.288-201ENST00000364854 92 ntBASIC1.11□□□□□ -2.23
MACF1Q9UPN3 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC1.11□□□□□ -2.23
MACF1Q9UPN3 RPL23AP82-202ENST00000427528 469 ntBASIC1.11□□□□□ -2.23
MACF1Q9UPN3 ETF1P3-201ENST00000430422 1160 ntBASIC1.11□□□□□ -2.23
MACF1Q9UPN3 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC1.11□□□□□ -2.23
MACF1Q9UPN3 CENPBD1P1-201ENST00000464061 469 ntBASIC1.11□□□□□ -2.23
MACF1Q9UPN3 OR5H3P-201ENST00000502817 919 ntBASIC1.11□□□□□ -2.23
MACF1Q9UPN3 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.11□□□□□ -2.23
MACF1Q9UPN3 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC1.11□□□□□ -2.23
MACF1Q9UPN3 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
MACF1Q9UPN3 MFSD8-233ENST00000641482 4860 ntBASIC1.11□□□□□ -2.23
MACF1Q9UPN3 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
MACF1Q9UPN3 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC1.11□□□□□ -2.23
MACF1Q9UPN3 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.11□□□□□ -2.23
MACF1Q9UPN3 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
MACF1Q9UPN3 RNY4P3-201ENST00000365254 95 ntBASIC1.11□□□□□ -2.23
MACF1Q9UPN3 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
MACF1Q9UPN3 AC004448.2-201ENST00000422360 586 ntBASIC1.11□□□□□ -2.23
MACF1Q9UPN3 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC1.11□□□□□ -2.23
MACF1Q9UPN3 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
MACF1Q9UPN3 AP002748.2-201ENST00000528671 348 ntBASIC1.11□□□□□ -2.23
MACF1Q9UPN3 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.11□□□□□ -2.23
MACF1Q9UPN3 AC127024.5-201ENST00000580085 462 ntBASIC1.11□□□□□ -2.23
MACF1Q9UPN3 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC1.11□□□□□ -2.23
MACF1Q9UPN3 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC1.11□□□□□ -2.23
MACF1Q9UPN3 AC008277.2-201ENST00000605196 797 ntBASIC1.11□□□□□ -2.23
MACF1Q9UPN3 AC012557.2-201ENST00000605919 418 ntBASIC1.11□□□□□ -2.23
MACF1Q9UPN3 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC1.11□□□□□ -2.23
MACF1Q9UPN3 uc_338.32-201ENST00000615087 172 ntBASIC1.11□□□□□ -2.23
MACF1Q9UPN3 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC1.11□□□□□ -2.23
MACF1Q9UPN3 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
MACF1Q9UPN3 SAGE4P-201ENST00000442271 3381 ntBASIC1.11□□□□□ -2.23
MACF1Q9UPN3 AC007496.3-201ENST00000624987 3443 ntBASIC1.11□□□□□ -2.23
MACF1Q9UPN3 GVINP1-202ENST00000531871 7271 ntBASIC1.11□□□□□ -2.23
MACF1Q9UPN3 RNU6-629P-201ENST00000384061 103 ntBASIC1.11□□□□□ -2.23
MACF1Q9UPN3 HMGB3P2-201ENST00000411913 584 ntBASIC1.11□□□□□ -2.23
MACF1Q9UPN3 AC241520.1-201ENST00000422654 1099 ntBASIC1.11□□□□□ -2.23
MACF1Q9UPN3 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC1.11□□□□□ -2.23
MACF1Q9UPN3 RPL29P29-201ENST00000448725 423 ntBASIC1.11□□□□□ -2.23
MACF1Q9UPN3 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC1.11□□□□□ -2.23
MACF1Q9UPN3 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.11□□□□□ -2.23
MACF1Q9UPN3 RN7SKP24-201ENST00000515888 284 ntBASIC1.11□□□□□ -2.23
MACF1Q9UPN3 AP001636.2-201ENST00000525517 696 ntBASIC1.11□□□□□ -2.23
MACF1Q9UPN3 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC1.11□□□□□ -2.23
MACF1Q9UPN3 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.11□□□□□ -2.23
MACF1Q9UPN3 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC1.11□□□□□ -2.23
MACF1Q9UPN3 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC1.11□□□□□ -2.23
MACF1Q9UPN3 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
MACF1Q9UPN3 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
MACF1Q9UPN3 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC1.11□□□□□ -2.23
MACF1Q9UPN3 RPS12P23-201ENST00000419579 400 ntBASIC1.11□□□□□ -2.23
MACF1Q9UPN3 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC1.11□□□□□ -2.23
MACF1Q9UPN3 AC108078.3-201ENST00000502633 489 ntBASIC1.11□□□□□ -2.23
MACF1Q9UPN3 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.11□□□□□ -2.23
MACF1Q9UPN3 ZNF33CP-201ENST00000432492 2030 ntBASIC1.11□□□□□ -2.23
MACF1Q9UPN3 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
MACF1Q9UPN3 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC1.11□□□□□ -2.23
MACF1Q9UPN3 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
MACF1Q9UPN3 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.11□□□□□ -2.23
MACF1Q9UPN3 AC009487.2-201ENST00000420969 6821 ntBASIC1.11□□□□□ -2.23
MACF1Q9UPN3 AC067945.1-201ENST00000342609 618 ntBASIC1.11□□□□□ -2.23
MACF1Q9UPN3 MIR409-201ENST00000362237 79 ntBASIC1.11□□□□□ -2.23
MACF1Q9UPN3 RNU1-112P-201ENST00000364401 164 ntBASIC1.11□□□□□ -2.23
MACF1Q9UPN3 AL023284.1-201ENST00000403956 276 ntBASIC1.11□□□□□ -2.23
MACF1Q9UPN3 AC105402.2-201ENST00000438503 358 ntBASIC1.11□□□□□ -2.23
MACF1Q9UPN3 AC093767.1-201ENST00000504523 156 ntBASIC1.11□□□□□ -2.23
MACF1Q9UPN3 VTRNA2-2P-201ENST00000516091 103 ntBASIC1.11□□□□□ -2.23
MACF1Q9UPN3 AC011611.5-201ENST00000552477 578 ntBASIC1.11□□□□□ -2.23
MACF1Q9UPN3 AL138976.2-201ENST00000563989 694 ntBASIC1.11□□□□□ -2.23
MACF1Q9UPN3 AL391646.1-201ENST00000603860 190 ntBASIC1.11□□□□□ -2.23
MACF1Q9UPN3 Y_RNA.804-201ENST00000615262 101 ntBASIC1.11□□□□□ -2.23
MACF1Q9UPN3 AC104307.1-201ENST00000616142 196 ntBASIC1.11□□□□□ -2.23
MACF1Q9UPN3 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC1.11□□□□□ -2.23
MACF1Q9UPN3 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
MACF1Q9UPN3 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC1.11□□□□□ -2.23
MACF1Q9UPN3 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
MACF1Q9UPN3 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC1.11□□□□□ -2.23
MACF1Q9UPN3 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC1.11□□□□□ -2.23
MACF1Q9UPN3 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.1□□□□□ -2.23
MACF1Q9UPN3 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC1.1□□□□□ -2.23
MACF1Q9UPN3 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms