Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LHX6Q9UPM6 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
LHX6Q9UPM6 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
LHX6Q9UPM6 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LHX6Q9UPM6 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
LHX6Q9UPM6 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
LHX6Q9UPM6 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
LHX6Q9UPM6 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
LHX6Q9UPM6 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LHX6Q9UPM6 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.49□□□□□ -1.37
LHX6Q9UPM6 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LHX6Q9UPM6 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC6.49□□□□□ -1.37
LHX6Q9UPM6 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
LHX6Q9UPM6 PPIAP22-201ENST00000358455 498 ntBASIC6.49□□□□□ -1.37
LHX6Q9UPM6 Y_RNA.121-201ENST00000363309 113 ntBASIC6.49□□□□□ -1.37
LHX6Q9UPM6 Y_RNA.217-201ENST00000364214 105 ntBASIC6.49□□□□□ -1.37
LHX6Q9UPM6 RNA5SP77-201ENST00000365394 120 ntBASIC6.49□□□□□ -1.37
LHX6Q9UPM6 RNU6-147P-201ENST00000383983 107 ntBASIC6.49□□□□□ -1.37
LHX6Q9UPM6 RNU6-476P-201ENST00000384726 107 ntBASIC6.49□□□□□ -1.37
LHX6Q9UPM6 MIR188-201ENST00000385034 86 ntBASIC6.49□□□□□ -1.37
LHX6Q9UPM6 AL022722.2-201ENST00000402519 180 ntBASIC6.49□□□□□ -1.37
LHX6Q9UPM6 RNA5SP89-201ENST00000410300 108 ntBASIC6.49□□□□□ -1.37
LHX6Q9UPM6 RN7SKP286-201ENST00000410894 299 ntBASIC6.49□□□□□ -1.37
LHX6Q9UPM6 Y_RNA.625-201ENST00000411256 107 ntBASIC6.49□□□□□ -1.37
LHX6Q9UPM6 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.49□□□□□ -1.37
LHX6Q9UPM6 RPL5P7-201ENST00000444235 813 ntBASIC6.49□□□□□ -1.37
LHX6Q9UPM6 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.49□□□□□ -1.37
LHX6Q9UPM6 AC074290.1-201ENST00000448883 135 ntBASIC6.49□□□□□ -1.37
LHX6Q9UPM6 EEF1B2P7-201ENST00000451177 676 ntBASIC6.49□□□□□ -1.37
LHX6Q9UPM6 Y_RNA.641-201ENST00000459414 105 ntBASIC6.49□□□□□ -1.37
LHX6Q9UPM6 COPS8P2-201ENST00000473228 627 ntBASIC6.49□□□□□ -1.37
LHX6Q9UPM6 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC6.49□□□□□ -1.37
LHX6Q9UPM6 EDDM3DP-201ENST00000554692 434 ntBASIC6.49□□□□□ -1.37
LHX6Q9UPM6 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC6.49□□□□□ -1.37
LHX6Q9UPM6 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC6.49□□□□□ -1.37
LHX6Q9UPM6 NPIPB1P-202ENST00000588786 828 ntBASIC6.49□□□□□ -1.37
LHX6Q9UPM6 AC025588.3-201ENST00000604182 274 ntBASIC6.49□□□□□ -1.37
LHX6Q9UPM6 MIR6129-201ENST00000616087 109 ntBASIC6.49□□□□□ -1.37
LHX6Q9UPM6 MIR6719-201ENST00000622428 87 ntBASIC6.49□□□□□ -1.37
LHX6Q9UPM6 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC6.49□□□□□ -1.37
LHX6Q9UPM6 AC024587.1-201ENST00000505925 2157 ntBASIC6.49□□□□□ -1.37
LHX6Q9UPM6 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LHX6Q9UPM6 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
LHX6Q9UPM6 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LHX6Q9UPM6 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
LHX6Q9UPM6 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC6.49□□□□□ -1.37
LHX6Q9UPM6 AL359263.1-201ENST00000441188 2796 ntBASIC6.49□□□□□ -1.37
LHX6Q9UPM6 CLCA3P-203ENST00000490028 2781 ntBASIC6.49□□□□□ -1.37
LHX6Q9UPM6 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LHX6Q9UPM6 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
LHX6Q9UPM6 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
LHX6Q9UPM6 AC083806.2-201ENST00000617795 2685 ntBASIC6.49□□□□□ -1.37
LHX6Q9UPM6 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LHX6Q9UPM6 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LHX6Q9UPM6 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
LHX6Q9UPM6 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
LHX6Q9UPM6 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.49□□□□□ -1.37
LHX6Q9UPM6 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
LHX6Q9UPM6 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC6.49□□□□□ -1.37
LHX6Q9UPM6 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
LHX6Q9UPM6 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
LHX6Q9UPM6 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC6.48□□□□□ -1.37
LHX6Q9UPM6 SPATA31B1P-201ENST00000434692 4016 ntBASIC6.48□□□□□ -1.37
LHX6Q9UPM6 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LHX6Q9UPM6 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LHX6Q9UPM6 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LHX6Q9UPM6 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC6.48□□□□□ -1.37
LHX6Q9UPM6 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
LHX6Q9UPM6 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC6.48□□□□□ -1.37
LHX6Q9UPM6 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LHX6Q9UPM6 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC6.48□□□□□ -1.37
LHX6Q9UPM6 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LHX6Q9UPM6 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
LHX6Q9UPM6 SFTPD-AS1-201ENST00000608229 5001 ntBASIC6.48□□□□□ -1.37
LHX6Q9UPM6 RNU6-729P-201ENST00000384399 107 ntBASIC6.48□□□□□ -1.37
LHX6Q9UPM6 SNORA20-201ENST00000384662 132 ntBASIC6.48□□□□□ -1.37
LHX6Q9UPM6 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
LHX6Q9UPM6 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
LHX6Q9UPM6 AL451136.1-201ENST00000435399 325 ntBASIC6.48□□□□□ -1.37
LHX6Q9UPM6 RPL23AP58-201ENST00000440453 469 ntBASIC6.48□□□□□ -1.37
LHX6Q9UPM6 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LHX6Q9UPM6 AL356981.1-201ENST00000454879 684 ntBASIC6.48□□□□□ -1.37
LHX6Q9UPM6 RN7SL39P-201ENST00000462264 297 ntBASIC6.48□□□□□ -1.37
LHX6Q9UPM6 RN7SL610P-201ENST00000463845 291 ntBASIC6.48□□□□□ -1.37
LHX6Q9UPM6 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC6.48□□□□□ -1.37
LHX6Q9UPM6 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.48□□□□□ -1.37
LHX6Q9UPM6 AC211433.2-201ENST00000608433 387 ntBASIC6.48□□□□□ -1.37
LHX6Q9UPM6 RMST_4.1-201ENST00000616886 107 ntBASIC6.48□□□□□ -1.37
LHX6Q9UPM6 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
LHX6Q9UPM6 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.48□□□□□ -1.37
LHX6Q9UPM6 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LHX6Q9UPM6 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.48□□□□□ -1.37
LHX6Q9UPM6 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LHX6Q9UPM6 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LHX6Q9UPM6 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LHX6Q9UPM6 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LHX6Q9UPM6 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
LHX6Q9UPM6 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
LHX6Q9UPM6 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
LHX6Q9UPM6 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms