Protein–RNA interactions for Protein: Q9ULD4

BRPF3, Bromodomain and PHD finger-containing protein 3, humanhuman

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3Q9ULD4 FRG1KP-201ENST00000623592 341 ntBASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 ELL2P4-201ENST00000446870 1376 ntBASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC6.16□□□□□ -1.42
BRPF3Q9ULD4 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC6.15□□□□□ -1.42
BRPF3Q9ULD4 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
BRPF3Q9ULD4 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
BRPF3Q9ULD4 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
BRPF3Q9ULD4 AC005294.1-201ENST00000355509 281 ntBASIC6.15□□□□□ -1.42
BRPF3Q9ULD4 SNORD81.2-201ENST00000365153 76 ntBASIC6.15□□□□□ -1.42
BRPF3Q9ULD4 RPL7P60-201ENST00000397636 735 ntBASIC6.15□□□□□ -1.42
BRPF3Q9ULD4 FAT1P1-201ENST00000406588 507 ntBASIC6.15□□□□□ -1.42
BRPF3Q9ULD4 AC007738.1-201ENST00000413892 348 ntBASIC6.15□□□□□ -1.42
BRPF3Q9ULD4 PDCL2P1-201ENST00000419302 352 ntBASIC6.15□□□□□ -1.42
BRPF3Q9ULD4 FABP7P1-201ENST00000424004 391 ntBASIC6.15□□□□□ -1.42
BRPF3Q9ULD4 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.15□□□□□ -1.42
BRPF3Q9ULD4 RBMY2QP-201ENST00000429799 1147 ntBASIC6.15□□□□□ -1.42
BRPF3Q9ULD4 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC6.15□□□□□ -1.42
BRPF3Q9ULD4 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC6.15□□□□□ -1.42
BRPF3Q9ULD4 AC007677.1-201ENST00000445757 515 ntBASIC6.15□□□□□ -1.42
BRPF3Q9ULD4 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC6.15□□□□□ -1.42
BRPF3Q9ULD4 AP001992.1-205ENST00000462248 379 ntBASIC6.15□□□□□ -1.42
BRPF3Q9ULD4 RPS27AP17-201ENST00000463344 455 ntBASIC6.15□□□□□ -1.42
BRPF3Q9ULD4 AC055855.1-201ENST00000489563 579 ntBASIC6.15□□□□□ -1.42
BRPF3Q9ULD4 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC6.15□□□□□ -1.42
BRPF3Q9ULD4 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC6.15□□□□□ -1.42
BRPF3Q9ULD4 BX510359.5-201ENST00000515651 304 ntBASIC6.15□□□□□ -1.42
BRPF3Q9ULD4 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC6.15□□□□□ -1.42
BRPF3Q9ULD4 AC134698.5-201ENST00000519444 336 ntBASIC6.15□□□□□ -1.42
BRPF3Q9ULD4 AC022360.1-201ENST00000521058 340 ntBASIC6.15□□□□□ -1.42
BRPF3Q9ULD4 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC6.15□□□□□ -1.42
BRPF3Q9ULD4 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC6.15□□□□□ -1.42
BRPF3Q9ULD4 AP001429.1-201ENST00000602568 530 ntBASIC6.15□□□□□ -1.42
BRPF3Q9ULD4 MIR6768-201ENST00000610734 72 ntBASIC6.15□□□□□ -1.42
BRPF3Q9ULD4 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC6.15□□□□□ -1.43
BRPF3Q9ULD4 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC6.15□□□□□ -1.43
BRPF3Q9ULD4 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
BRPF3Q9ULD4 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
BRPF3Q9ULD4 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
BRPF3Q9ULD4 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC6.14□□□□□ -1.43
BRPF3Q9ULD4 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
BRPF3Q9ULD4 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC6.14□□□□□ -1.43
BRPF3Q9ULD4 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
BRPF3Q9ULD4 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
BRPF3Q9ULD4 AC023421.1-201ENST00000590535 1785 ntBASIC6.14□□□□□ -1.43
BRPF3Q9ULD4 AC068254.2-201ENST00000623938 3577 ntBASIC6.14□□□□□ -1.43
BRPF3Q9ULD4 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
BRPF3Q9ULD4 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
BRPF3Q9ULD4 AC092747.4-201ENST00000620519 1861 ntBASIC6.14□□□□□ -1.43
BRPF3Q9ULD4 MAX-203ENST00000341653 330 ntTSL 2 BASIC6.14□□□□□ -1.43
BRPF3Q9ULD4 RNU1-94P-201ENST00000362627 173 ntBASIC6.14□□□□□ -1.43
BRPF3Q9ULD4 RNU6-97P-201ENST00000363387 104 ntBASIC6.14□□□□□ -1.43
BRPF3Q9ULD4 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC6.14□□□□□ -1.43
BRPF3Q9ULD4 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
BRPF3Q9ULD4 AC092832.1-201ENST00000422934 400 ntBASIC6.14□□□□□ -1.43
BRPF3Q9ULD4 AC108075.1-201ENST00000424692 529 ntBASIC6.14□□□□□ -1.43
BRPF3Q9ULD4 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC6.14□□□□□ -1.43
BRPF3Q9ULD4 TAAR7P-201ENST00000436141 242 ntBASIC6.14□□□□□ -1.43
BRPF3Q9ULD4 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC6.14□□□□□ -1.43
BRPF3Q9ULD4 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC6.14□□□□□ -1.43
BRPF3Q9ULD4 CBWD4P-201ENST00000445695 655 ntBASIC6.14□□□□□ -1.43
BRPF3Q9ULD4 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC6.14□□□□□ -1.43
BRPF3Q9ULD4 RPS3AP50-201ENST00000487064 803 ntBASIC6.14□□□□□ -1.43
BRPF3Q9ULD4 RPS24P16-201ENST00000497294 392 ntBASIC6.14□□□□□ -1.43
BRPF3Q9ULD4 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC6.14□□□□□ -1.43
BRPF3Q9ULD4 PCBP2P3-201ENST00000509726 843 ntBASIC6.14□□□□□ -1.43
BRPF3Q9ULD4 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC6.14□□□□□ -1.43
BRPF3Q9ULD4 AC110792.2-201ENST00000510278 224 ntBASIC6.14□□□□□ -1.43
BRPF3Q9ULD4 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC6.14□□□□□ -1.43
BRPF3Q9ULD4 AC093853.1-201ENST00000515689 483 ntBASIC6.14□□□□□ -1.43
BRPF3Q9ULD4 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC6.14□□□□□ -1.43
BRPF3Q9ULD4 OR4R1P-201ENST00000529879 463 ntBASIC6.14□□□□□ -1.43
BRPF3Q9ULD4 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC6.14□□□□□ -1.43
BRPF3Q9ULD4 AC243972.3-201ENST00000539655 198 ntBASIC6.14□□□□□ -1.43
BRPF3Q9ULD4 AL161713.1-201ENST00000555538 145 ntBASIC6.14□□□□□ -1.43
BRPF3Q9ULD4 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC6.14□□□□□ -1.43
BRPF3Q9ULD4 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
BRPF3Q9ULD4 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC6.14□□□□□ -1.43
BRPF3Q9ULD4 UBE2L4-201ENST00000587688 464 ntBASIC6.14□□□□□ -1.43
BRPF3Q9ULD4 AC068790.3-201ENST00000602988 553 ntBASIC6.14□□□□□ -1.43
BRPF3Q9ULD4 AC008782.1-201ENST00000603386 430 ntBASIC6.14□□□□□ -1.43
BRPF3Q9ULD4 AC009597.2-201ENST00000604659 592 ntBASIC6.14□□□□□ -1.43
BRPF3Q9ULD4 AL442067.2-201ENST00000614033 363 ntBASIC6.14□□□□□ -1.43
BRPF3Q9ULD4 AL596245.1-201ENST00000618994 362 ntBASIC6.14□□□□□ -1.43
BRPF3Q9ULD4 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC6.14□□□□□ -1.43
BRPF3Q9ULD4 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.14□□□□□ -1.43
BRPF3Q9ULD4 AC090574.1-201ENST00000623186 233 ntBASIC6.14□□□□□ -1.43
BRPF3Q9ULD4 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC6.14□□□□□ -1.43
BRPF3Q9ULD4 MIR6715B-201ENST00000637172 77 ntBASIC6.14□□□□□ -1.43
BRPF3Q9ULD4 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
BRPF3Q9ULD4 AC090229.1-201ENST00000590983 1609 ntBASIC6.14□□□□□ -1.43
BRPF3Q9ULD4 AC011493.1-201ENST00000596753 1632 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms