Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
FOXD3Q9UJU5 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
FOXD3Q9UJU5 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
FOXD3Q9UJU5 RNA5SP375-201ENST00000362975 119 ntBASIC5.38□□□□□ -1.55
FOXD3Q9UJU5 Y_RNA.80-201ENST00000362996 102 ntBASIC5.38□□□□□ -1.55
FOXD3Q9UJU5 RNU6-701P-201ENST00000384059 107 ntBASIC5.38□□□□□ -1.55
FOXD3Q9UJU5 Y_RNA.463-201ENST00000384271 102 ntBASIC5.38□□□□□ -1.55
FOXD3Q9UJU5 MT-TG-201ENST00000387429 68 ntBASIC5.38□□□□□ -1.55
FOXD3Q9UJU5 SNORA75.6-201ENST00000391318 127 ntBASIC5.38□□□□□ -1.55
FOXD3Q9UJU5 AL121835.1-201ENST00000404250 354 ntBASIC5.38□□□□□ -1.55
FOXD3Q9UJU5 AL445189.1-201ENST00000405722 338 ntBASIC5.38□□□□□ -1.55
FOXD3Q9UJU5 AL096829.1-201ENST00000413677 457 ntBASIC5.38□□□□□ -1.55
FOXD3Q9UJU5 RPS23P10-201ENST00000416185 486 ntBASIC5.38□□□□□ -1.55
FOXD3Q9UJU5 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC5.38□□□□□ -1.55
FOXD3Q9UJU5 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.38□□□□□ -1.55
FOXD3Q9UJU5 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC5.38□□□□□ -1.55
FOXD3Q9UJU5 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.38□□□□□ -1.55
FOXD3Q9UJU5 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.38□□□□□ -1.55
FOXD3Q9UJU5 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.38□□□□□ -1.55
FOXD3Q9UJU5 RN7SL352P-201ENST00000466002 277 ntBASIC5.38□□□□□ -1.55
FOXD3Q9UJU5 AC015911.1-201ENST00000495111 156 ntBASIC5.38□□□□□ -1.55
FOXD3Q9UJU5 AC026801.1-201ENST00000497178 464 ntBASIC5.38□□□□□ -1.55
FOXD3Q9UJU5 AC093815.1-201ENST00000508637 280 ntBASIC5.38□□□□□ -1.55
FOXD3Q9UJU5 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.38□□□□□ -1.55
FOXD3Q9UJU5 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC5.38□□□□□ -1.55
FOXD3Q9UJU5 RNA5SP438-201ENST00000516561 112 ntBASIC5.38□□□□□ -1.55
FOXD3Q9UJU5 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.38□□□□□ -1.55
FOXD3Q9UJU5 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.38□□□□□ -1.55
FOXD3Q9UJU5 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.38□□□□□ -1.55
FOXD3Q9UJU5 AC007494.1-201ENST00000562293 760 ntBASIC5.38□□□□□ -1.55
FOXD3Q9UJU5 AC109309.2-201ENST00000612597 332 ntBASIC5.38□□□□□ -1.55
FOXD3Q9UJU5 U4.1-201ENST00000620349 87 ntBASIC5.38□□□□□ -1.55
FOXD3Q9UJU5 AP001005.3-201ENST00000622049 129 ntBASIC5.38□□□□□ -1.55
FOXD3Q9UJU5 Z69720.2-201ENST00000624755 279 ntBASIC5.38□□□□□ -1.55
FOXD3Q9UJU5 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.38□□□□□ -1.55
FOXD3Q9UJU5 AC119674.1-207ENST00000641355 633 ntBASIC5.38□□□□□ -1.55
FOXD3Q9UJU5 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
FOXD3Q9UJU5 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
FOXD3Q9UJU5 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
FOXD3Q9UJU5 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.38□□□□□ -1.55
FOXD3Q9UJU5 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
FOXD3Q9UJU5 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
FOXD3Q9UJU5 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
FOXD3Q9UJU5 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
FOXD3Q9UJU5 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
FOXD3Q9UJU5 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
FOXD3Q9UJU5 MTND5P30-201ENST00000452896 1731 ntBASIC5.37□□□□□ -1.55
FOXD3Q9UJU5 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
FOXD3Q9UJU5 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
FOXD3Q9UJU5 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.37□□□□□ -1.55
FOXD3Q9UJU5 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.37□□□□□ -1.55
FOXD3Q9UJU5 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
FOXD3Q9UJU5 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
FOXD3Q9UJU5 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.37□□□□□ -1.55
FOXD3Q9UJU5 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
FOXD3Q9UJU5 DNM1P47-203ENST00000571780 12667 ntBASIC5.37□□□□□ -1.55
FOXD3Q9UJU5 AC090337.1-201ENST00000579651 2074 ntBASIC5.37□□□□□ -1.55
FOXD3Q9UJU5 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
FOXD3Q9UJU5 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
FOXD3Q9UJU5 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.37□□□□□ -1.55
FOXD3Q9UJU5 SNORA51.1-201ENST00000363243 140 ntBASIC5.37□□□□□ -1.55
FOXD3Q9UJU5 Y_RNA.364-201ENST00000365532 101 ntBASIC5.37□□□□□ -1.55
FOXD3Q9UJU5 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
FOXD3Q9UJU5 RNU6ATAC16P-201ENST00000408591 138 ntBASIC5.37□□□□□ -1.55
FOXD3Q9UJU5 MIR1203-201ENST00000408812 85 ntBASIC5.37□□□□□ -1.55
FOXD3Q9UJU5 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
FOXD3Q9UJU5 RNA5SP111-201ENST00000411386 101 ntBASIC5.37□□□□□ -1.55
FOXD3Q9UJU5 RN7SKP293-201ENST00000411389 296 ntBASIC5.37□□□□□ -1.55
FOXD3Q9UJU5 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.37□□□□□ -1.55
FOXD3Q9UJU5 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC5.37□□□□□ -1.55
FOXD3Q9UJU5 CYCSP43-201ENST00000438233 310 ntBASIC5.37□□□□□ -1.55
FOXD3Q9UJU5 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.37□□□□□ -1.55
FOXD3Q9UJU5 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC5.37□□□□□ -1.55
FOXD3Q9UJU5 AL359955.2-201ENST00000445380 353 ntBASIC5.37□□□□□ -1.55
FOXD3Q9UJU5 AP006222.1-205ENST00000450734 457 ntBASIC5.37□□□□□ -1.55
FOXD3Q9UJU5 IGHV5-78-201ENST00000450948 295 ntBASIC5.37□□□□□ -1.55
FOXD3Q9UJU5 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.37□□□□□ -1.55
FOXD3Q9UJU5 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.37□□□□□ -1.55
FOXD3Q9UJU5 AL445687.2-201ENST00000458156 728 ntBASIC5.37□□□□□ -1.55
FOXD3Q9UJU5 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC5.37□□□□□ -1.55
FOXD3Q9UJU5 RN7SL273P-201ENST00000481561 299 ntBASIC5.37□□□□□ -1.55
FOXD3Q9UJU5 RPL23AP40-201ENST00000487630 390 ntBASIC5.37□□□□□ -1.55
FOXD3Q9UJU5 RN7SL193P-201ENST00000491708 276 ntBASIC5.37□□□□□ -1.55
FOXD3Q9UJU5 AC083795.1-201ENST00000491760 320 ntBASIC5.37□□□□□ -1.55
FOXD3Q9UJU5 AP001086.1-201ENST00000494882 321 ntBASIC5.37□□□□□ -1.55
FOXD3Q9UJU5 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.37□□□□□ -1.55
FOXD3Q9UJU5 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
FOXD3Q9UJU5 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.37□□□□□ -1.55
FOXD3Q9UJU5 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
FOXD3Q9UJU5 PTP4A1P6-201ENST00000531034 478 ntBASIC5.37□□□□□ -1.55
FOXD3Q9UJU5 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.37□□□□□ -1.55
FOXD3Q9UJU5 AC008269.2-201ENST00000561915 1105 ntBASIC5.37□□□□□ -1.55
FOXD3Q9UJU5 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC5.37□□□□□ -1.55
FOXD3Q9UJU5 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.37□□□□□ -1.55
FOXD3Q9UJU5 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.37□□□□□ -1.55
FOXD3Q9UJU5 AC012254.3-201ENST00000591183 2117 ntBASIC5.37□□□□□ -1.55
FOXD3Q9UJU5 AC018462.2-201ENST00000605375 395 ntBASIC5.37□□□□□ -1.55
FOXD3Q9UJU5 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC5.37□□□□□ -1.55
FOXD3Q9UJU5 AC005014.2-201ENST00000607795 599 ntBASIC5.37□□□□□ -1.55
FOXD3Q9UJU5 AC243312.2-201ENST00000623340 601 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms