Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 ANKRD20A10P-201ENST00000457591 1515 ntBASIC5.11□□□□□ -1.59
PPARGC1AQ9UBK2 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PPARGC1AQ9UBK2 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PPARGC1AQ9UBK2 Z95327.2-201ENST00000414579 1873 ntBASIC5.11□□□□□ -1.59
PPARGC1AQ9UBK2 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.11□□□□□ -1.59
PPARGC1AQ9UBK2 NEAT1-202ENST00000501122 22743 ntBASIC5.11□□□□□ -1.59
PPARGC1AQ9UBK2 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.11□□□□□ -1.59
PPARGC1AQ9UBK2 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 RNU5E-1-201ENST00000362477 120 ntBASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 RNY3P3-201ENST00000363816 102 ntBASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 RNU4-1-201ENST00000363925 141 ntBASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 Y_RNA.263-201ENST00000364659 114 ntBASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 RPS4XP8-201ENST00000402039 771 ntBASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 AL645733.1-201ENST00000402250 217 ntBASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 AL359643.1-201ENST00000404109 423 ntBASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 CHEK2P3-201ENST00000416118 248 ntBASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 AL592437.2-201ENST00000421655 2434 ntBASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 SEPT14P3-201ENST00000439401 183 ntBASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 USP9YP15-201ENST00000442391 422 ntBASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 AL732372.2-207ENST00000445840 183 ntBASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 HMGB3P21-201ENST00000452483 547 ntBASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 SEPT14P2-201ENST00000453405 183 ntBASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 RPL32P9-201ENST00000487963 407 ntBASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 HMGN1P12-201ENST00000499125 195 ntBASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 AC093767.1-201ENST00000504523 156 ntBASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 MRPS33P2-201ENST00000507850 322 ntBASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 NAF1-205ENST00000509434 385 ntTSL 3 BASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 SEPT14P4-201ENST00000513445 186 ntBASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 SNORD116-26-201ENST00000516006 96 ntBASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 AF186190.1-201ENST00000517470 480 ntBASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 FO082796.1-201ENST00000523795 183 ntBASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 CENPUP1-201ENST00000526649 1202 ntBASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 GLYCAM1-201ENST00000546596 285 ntBASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 AC123904.2-201ENST00000548059 300 ntBASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 HMGB3P26-201ENST00000560051 582 ntBASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 AC090615.1-201ENST00000577519 154 ntBASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 AC128687.2-201ENST00000609657 566 ntBASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 AL136295.6-201ENST00000610486 658 ntBASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 AL121757.2-201ENST00000611223 313 ntBASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 AC009161.2-201ENST00000624626 138 ntBASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 AL359697.1-201ENST00000624879 587 ntBASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 MTND1P37-201ENST00000636562 264 ntBASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 LINC01355-201ENST00000566551 5444 ntBASIC5.1□□□□□ -1.59
PPARGC1AQ9UBK2 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PPARGC1AQ9UBK2 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.09□□□□□ -1.59
PPARGC1AQ9UBK2 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.09□□□□□ -1.59
PPARGC1AQ9UBK2 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
PPARGC1AQ9UBK2 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
PPARGC1AQ9UBK2 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.09□□□□□ -1.59
PPARGC1AQ9UBK2 Y_RNA.72-201ENST00000362894 103 ntBASIC5.09□□□□□ -1.59
PPARGC1AQ9UBK2 RNU6-1120P-201ENST00000362988 108 ntBASIC5.09□□□□□ -1.59
PPARGC1AQ9UBK2 RNU6-1097P-201ENST00000363586 107 ntBASIC5.09□□□□□ -1.59
PPARGC1AQ9UBK2 SNORA74A-201ENST00000364089 198 ntBASIC5.09□□□□□ -1.59
PPARGC1AQ9UBK2 RNU6-359P-201ENST00000365466 108 ntBASIC5.09□□□□□ -1.59
PPARGC1AQ9UBK2 RNU6-108P-201ENST00000365558 107 ntBASIC5.09□□□□□ -1.59
PPARGC1AQ9UBK2 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC5.09□□□□□ -1.59
PPARGC1AQ9UBK2 RPL31P45-201ENST00000419532 356 ntBASIC5.09□□□□□ -1.59
PPARGC1AQ9UBK2 AL353193.1-201ENST00000421444 268 ntBASIC5.09□□□□□ -1.59
PPARGC1AQ9UBK2 AL590233.1-201ENST00000430017 456 ntBASIC5.09□□□□□ -1.59
PPARGC1AQ9UBK2 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.09□□□□□ -1.59
PPARGC1AQ9UBK2 PRPF38AP2-201ENST00000438179 851 ntBASIC5.09□□□□□ -1.59
PPARGC1AQ9UBK2 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.09□□□□□ -1.59
PPARGC1AQ9UBK2 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.09□□□□□ -1.59
PPARGC1AQ9UBK2 AC092001.1-201ENST00000453012 261 ntBASIC5.09□□□□□ -1.59
PPARGC1AQ9UBK2 PMCHL2-203ENST00000457791 237 ntBASIC5.09□□□□□ -1.59
PPARGC1AQ9UBK2 RNU6-420P-201ENST00000458780 107 ntBASIC5.09□□□□□ -1.59
PPARGC1AQ9UBK2 snoU13.7-201ENST00000459220 104 ntBASIC5.09□□□□□ -1.59
PPARGC1AQ9UBK2 AC010587.1-201ENST00000505809 469 ntBASIC5.09□□□□□ -1.59
PPARGC1AQ9UBK2 AC114786.4-201ENST00000508771 728 ntBASIC5.09□□□□□ -1.59
PPARGC1AQ9UBK2 Y_RNA.719-201ENST00000517156 106 ntBASIC5.09□□□□□ -1.59
PPARGC1AQ9UBK2 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.09□□□□□ -1.59
PPARGC1AQ9UBK2 AL109766.1-201ENST00000555080 552 ntBASIC5.09□□□□□ -1.59
PPARGC1AQ9UBK2 MEG8-218ENST00000556720 456 ntTSL 3 BASIC5.09□□□□□ -1.59
PPARGC1AQ9UBK2 AL356432.3-201ENST00000568952 465 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms