Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC2.42□□□□□ -2.02
CHD7Q9P2D1 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.42□□□□□ -2.02
CHD7Q9P2D1 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.42□□□□□ -2.02
CHD7Q9P2D1 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC2.42□□□□□ -2.02
CHD7Q9P2D1 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC2.42□□□□□ -2.02
CHD7Q9P2D1 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC2.42□□□□□ -2.02
CHD7Q9P2D1 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC2.42□□□□□ -2.02
CHD7Q9P2D1 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC2.41□□□□□ -2.02
CHD7Q9P2D1 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC2.41□□□□□ -2.02
CHD7Q9P2D1 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.41□□□□□ -2.02
CHD7Q9P2D1 RNU6-1140P-201ENST00000410517 106 ntBASIC2.41□□□□□ -2.02
CHD7Q9P2D1 Z82205.1-201ENST00000428456 297 ntBASIC2.41□□□□□ -2.02
CHD7Q9P2D1 AC108667.1-201ENST00000428618 249 ntBASIC2.41□□□□□ -2.02
CHD7Q9P2D1 AP000893.1-201ENST00000474462 794 ntBASIC2.41□□□□□ -2.02
CHD7Q9P2D1 RPS6P4-201ENST00000494693 758 ntBASIC2.41□□□□□ -2.02
CHD7Q9P2D1 RNU6-1053P-201ENST00000515930 101 ntBASIC2.41□□□□□ -2.02
CHD7Q9P2D1 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC2.41□□□□□ -2.02
CHD7Q9P2D1 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.41□□□□□ -2.02
CHD7Q9P2D1 AL359821.1-201ENST00000605519 182 ntBASIC2.41□□□□□ -2.02
CHD7Q9P2D1 AC004825.2-201ENST00000616634 455 ntBASIC2.41□□□□□ -2.02
CHD7Q9P2D1 AL158196.1-201ENST00000616786 434 ntBASIC2.41□□□□□ -2.02
CHD7Q9P2D1 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.41□□□□□ -2.02
CHD7Q9P2D1 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CHD7Q9P2D1 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC2.41□□□□□ -2.02
CHD7Q9P2D1 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CHD7Q9P2D1 AL162578.1-201ENST00000406202 378 ntBASIC2.41□□□□□ -2.02
CHD7Q9P2D1 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.41□□□□□ -2.02
CHD7Q9P2D1 AC013410.1-201ENST00000436223 1232 ntBASIC2.41□□□□□ -2.02
CHD7Q9P2D1 AC126182.1-201ENST00000478134 357 ntBASIC2.41□□□□□ -2.02
CHD7Q9P2D1 AC011037.1-201ENST00000483964 558 ntBASIC2.41□□□□□ -2.02
CHD7Q9P2D1 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.41□□□□□ -2.02
CHD7Q9P2D1 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.41□□□□□ -2.02
CHD7Q9P2D1 snoU13.31-201ENST00000607291 104 ntBASIC2.41□□□□□ -2.02
CHD7Q9P2D1 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.41□□□□□ -2.02
CHD7Q9P2D1 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC2.41□□□□□ -2.02
CHD7Q9P2D1 OR10AB1P-202ENST00000641219 1686 ntBASIC2.41□□□□□ -2.02
CHD7Q9P2D1 SNORA41-201ENST00000384675 132 ntBASIC2.4□□□□□ -2.02
CHD7Q9P2D1 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.4□□□□□ -2.02
CHD7Q9P2D1 MTCO2P17-201ENST00000424336 677 ntBASIC2.4□□□□□ -2.02
CHD7Q9P2D1 PPIAP17-201ENST00000438507 471 ntBASIC2.4□□□□□ -2.02
CHD7Q9P2D1 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC2.4□□□□□ -2.02
CHD7Q9P2D1 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.4□□□□□ -2.02
CHD7Q9P2D1 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.4□□□□□ -2.02
CHD7Q9P2D1 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.4□□□□□ -2.02
CHD7Q9P2D1 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.4□□□□□ -2.02
CHD7Q9P2D1 AC008121.2-201ENST00000614647 523 ntBASIC2.4□□□□□ -2.02
CHD7Q9P2D1 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
CHD7Q9P2D1 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CHD7Q9P2D1 RPS20P25-201ENST00000412447 352 ntBASIC2.4□□□□□ -2.03
CHD7Q9P2D1 SPA17P1-201ENST00000416656 452 ntBASIC2.4□□□□□ -2.03
CHD7Q9P2D1 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC2.4□□□□□ -2.03
CHD7Q9P2D1 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.4□□□□□ -2.03
CHD7Q9P2D1 RNU6-295P-201ENST00000516901 104 ntBASIC2.4□□□□□ -2.03
CHD7Q9P2D1 RN7SKP60-201ENST00000516985 239 ntBASIC2.4□□□□□ -2.03
CHD7Q9P2D1 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC2.4□□□□□ -2.03
CHD7Q9P2D1 AC011611.5-201ENST00000552477 578 ntBASIC2.4□□□□□ -2.03
CHD7Q9P2D1 MIR5092-201ENST00000583139 88 ntBASIC2.4□□□□□ -2.03
CHD7Q9P2D1 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.4□□□□□ -2.03
CHD7Q9P2D1 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC2.4□□□□□ -2.03
CHD7Q9P2D1 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC2.4□□□□□ -2.03
CHD7Q9P2D1 AL035551.1-201ENST00000446931 348 ntBASIC2.4□□□□□ -2.03
CHD7Q9P2D1 TRBV26-201ENST00000456572 344 ntBASIC2.4□□□□□ -2.03
CHD7Q9P2D1 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
CHD7Q9P2D1 AC123904.3-201ENST00000547218 814 ntBASIC2.4□□□□□ -2.03
CHD7Q9P2D1 Z99129.2-201ENST00000619967 314 ntBASIC2.4□□□□□ -2.03
CHD7Q9P2D1 AC000123.3-201ENST00000624029 4975 ntBASIC2.39□□□□□ -2.03
CHD7Q9P2D1 RNU6-661P-201ENST00000362409 107 ntBASIC2.39□□□□□ -2.03
CHD7Q9P2D1 MIR221-201ENST00000385135 110 ntBASIC2.39□□□□□ -2.03
CHD7Q9P2D1 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
CHD7Q9P2D1 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC2.39□□□□□ -2.03
CHD7Q9P2D1 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.39□□□□□ -2.03
CHD7Q9P2D1 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC2.39□□□□□ -2.03
CHD7Q9P2D1 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CHD7Q9P2D1 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC2.39□□□□□ -2.03
CHD7Q9P2D1 MTCO1P7-201ENST00000419523 1542 ntBASIC2.39□□□□□ -2.03
CHD7Q9P2D1 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.39□□□□□ -2.03
CHD7Q9P2D1 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
CHD7Q9P2D1 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.39□□□□□ -2.03
CHD7Q9P2D1 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
CHD7Q9P2D1 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC2.39□□□□□ -2.03
CHD7Q9P2D1 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC2.38□□□□□ -2.03
CHD7Q9P2D1 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CHD7Q9P2D1 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CHD7Q9P2D1 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CHD7Q9P2D1 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC2.38□□□□□ -2.03
CHD7Q9P2D1 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
CHD7Q9P2D1 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.38□□□□□ -2.03
CHD7Q9P2D1 MTCYBP20-201ENST00000524239 1129 ntBASIC2.38□□□□□ -2.03
CHD7Q9P2D1 AC010378.1-201ENST00000619270 362 ntBASIC2.38□□□□□ -2.03
CHD7Q9P2D1 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.38□□□□□ -2.03
CHD7Q9P2D1 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CHD7Q9P2D1 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.38□□□□□ -2.03
CHD7Q9P2D1 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.38□□□□□ -2.03
CHD7Q9P2D1 U7.8-201ENST00000619968 63 ntBASIC2.38□□□□□ -2.03
CHD7Q9P2D1 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CHD7Q9P2D1 AL356489.2-201ENST00000566968 3528 ntBASIC2.37□□□□□ -2.03
CHD7Q9P2D1 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CHD7Q9P2D1 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CHD7Q9P2D1 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC2.37□□□□□ -2.03
CHD7Q9P2D1 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms