Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 MIR105-2-201ENST00000385083 81 ntBASIC5.8□□□□□ -1.48
CNTN3Q9P232 AL592114.1-201ENST00000403842 483 ntBASIC5.8□□□□□ -1.48
CNTN3Q9P232 RPS4XP9-201ENST00000405151 780 ntBASIC5.8□□□□□ -1.48
CNTN3Q9P232 MIR548K-201ENST00000408406 116 ntBASIC5.8□□□□□ -1.48
CNTN3Q9P232 AL358176.3-201ENST00000420757 454 ntBASIC5.8□□□□□ -1.48
CNTN3Q9P232 AL590609.2-201ENST00000421430 368 ntBASIC5.8□□□□□ -1.48
CNTN3Q9P232 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.8□□□□□ -1.48
CNTN3Q9P232 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.8□□□□□ -1.48
CNTN3Q9P232 FTH1P1-201ENST00000437933 532 ntBASIC5.8□□□□□ -1.48
CNTN3Q9P232 MTND1P9-201ENST00000453775 944 ntBASIC5.8□□□□□ -1.48
CNTN3Q9P232 AC083904.1-201ENST00000487828 231 ntBASIC5.8□□□□□ -1.48
CNTN3Q9P232 AC008953.1-201ENST00000497334 318 ntBASIC5.8□□□□□ -1.48
CNTN3Q9P232 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CNTN3Q9P232 RPL39P5-202ENST00000512505 151 ntBASIC5.8□□□□□ -1.48
CNTN3Q9P232 Y_RNA.682-201ENST00000516457 100 ntBASIC5.8□□□□□ -1.48
CNTN3Q9P232 RNU7-51P-201ENST00000516560 62 ntBASIC5.8□□□□□ -1.48
CNTN3Q9P232 SCARNA20.4-201ENST00000516969 131 ntBASIC5.8□□□□□ -1.48
CNTN3Q9P232 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC5.8□□□□□ -1.48
CNTN3Q9P232 RNU6-988P-201ENST00000519081 107 ntBASIC5.8□□□□□ -1.48
CNTN3Q9P232 AC022634.1-201ENST00000520765 532 ntBASIC5.8□□□□□ -1.48
CNTN3Q9P232 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.8□□□□□ -1.48
CNTN3Q9P232 OR5B10P-201ENST00000532869 642 ntBASIC5.8□□□□□ -1.48
CNTN3Q9P232 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.8□□□□□ -1.48
CNTN3Q9P232 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.8□□□□□ -1.48
CNTN3Q9P232 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.8□□□□□ -1.48
CNTN3Q9P232 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC5.8□□□□□ -1.48
CNTN3Q9P232 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC5.8□□□□□ -1.48
CNTN3Q9P232 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.8□□□□□ -1.48
CNTN3Q9P232 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CNTN3Q9P232 AC005191.1-201ENST00000603950 358 ntBASIC5.8□□□□□ -1.48
CNTN3Q9P232 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.8□□□□□ -1.48
CNTN3Q9P232 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CNTN3Q9P232 MIR6133-201ENST00000617057 108 ntBASIC5.8□□□□□ -1.48
CNTN3Q9P232 MIR6864-201ENST00000617935 70 ntBASIC5.8□□□□□ -1.48
CNTN3Q9P232 uc_338.7-201ENST00000621834 124 ntBASIC5.8□□□□□ -1.48
CNTN3Q9P232 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.8□□□□□ -1.48
CNTN3Q9P232 CYP4F35P-202ENST00000636121 390 ntBASIC5.8□□□□□ -1.48
CNTN3Q9P232 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
CNTN3Q9P232 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.8□□□□□ -1.48
CNTN3Q9P232 AC100757.1-201ENST00000616872 1835 ntBASIC5.8□□□□□ -1.48
CNTN3Q9P232 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CNTN3Q9P232 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CNTN3Q9P232 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CNTN3Q9P232 AC004158.1-201ENST00000564508 4319 ntBASIC5.8□□□□□ -1.48
CNTN3Q9P232 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CNTN3Q9P232 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
CNTN3Q9P232 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CNTN3Q9P232 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CNTN3Q9P232 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.79□□□□□ -1.48
CNTN3Q9P232 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CNTN3Q9P232 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CNTN3Q9P232 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.79□□□□□ -1.48
CNTN3Q9P232 TAB3P1-202ENST00000452645 1634 ntBASIC5.79□□□□□ -1.48
CNTN3Q9P232 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CNTN3Q9P232 AC092681.1-201ENST00000297369 291 ntBASIC5.79□□□□□ -1.48
CNTN3Q9P232 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CNTN3Q9P232 SNORA62.1-201ENST00000364287 154 ntBASIC5.79□□□□□ -1.48
CNTN3Q9P232 AC117470.1-201ENST00000381974 330 ntBASIC5.79□□□□□ -1.48
CNTN3Q9P232 RNU6-1293P-201ENST00000384077 107 ntBASIC5.79□□□□□ -1.48
CNTN3Q9P232 RNU6-196P-201ENST00000384315 107 ntBASIC5.79□□□□□ -1.48
CNTN3Q9P232 PPIAP9-201ENST00000403866 498 ntBASIC5.79□□□□□ -1.48
CNTN3Q9P232 SPTLC1P2-201ENST00000407089 121 ntBASIC5.79□□□□□ -1.48
CNTN3Q9P232 RN7SKP247-201ENST00000411094 308 ntBASIC5.79□□□□□ -1.48
CNTN3Q9P232 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC5.79□□□□□ -1.48
CNTN3Q9P232 AL358176.2-201ENST00000425769 204 ntBASIC5.79□□□□□ -1.48
CNTN3Q9P232 OR2AS1P-201ENST00000427827 319 ntBASIC5.79□□□□□ -1.48
CNTN3Q9P232 BRWD1P3-201ENST00000428816 390 ntBASIC5.79□□□□□ -1.48
CNTN3Q9P232 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC5.79□□□□□ -1.48
CNTN3Q9P232 AC108059.2-201ENST00000434626 151 ntBASIC5.79□□□□□ -1.48
CNTN3Q9P232 NDUFB4P8-201ENST00000435351 367 ntBASIC5.79□□□□□ -1.48
CNTN3Q9P232 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.79□□□□□ -1.48
CNTN3Q9P232 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.79□□□□□ -1.48
CNTN3Q9P232 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.79□□□□□ -1.48
CNTN3Q9P232 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC5.79□□□□□ -1.48
CNTN3Q9P232 RPL21P89-201ENST00000444021 467 ntBASIC5.79□□□□□ -1.48
CNTN3Q9P232 NOP56P2-201ENST00000447491 769 ntBASIC5.79□□□□□ -1.48
CNTN3Q9P232 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.79□□□□□ -1.48
CNTN3Q9P232 CBX1P2-201ENST00000453841 458 ntBASIC5.79□□□□□ -1.48
CNTN3Q9P232 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC5.79□□□□□ -1.48
CNTN3Q9P232 RNU7-180P-201ENST00000459240 63 ntBASIC5.79□□□□□ -1.48
CNTN3Q9P232 RN7SL515P-201ENST00000463999 297 ntBASIC5.79□□□□□ -1.48
CNTN3Q9P232 ALDH7A1P3-201ENST00000492517 345 ntBASIC5.79□□□□□ -1.48
CNTN3Q9P232 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.79□□□□□ -1.48
CNTN3Q9P232 AC092436.1-201ENST00000506450 503 ntBASIC5.79□□□□□ -1.48
CNTN3Q9P232 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.79□□□□□ -1.48
CNTN3Q9P232 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC5.79□□□□□ -1.48
CNTN3Q9P232 RNU6-1046P-201ENST00000516538 107 ntBASIC5.79□□□□□ -1.48
CNTN3Q9P232 RNA5SP503-201ENST00000517047 117 ntBASIC5.79□□□□□ -1.48
CNTN3Q9P232 Y_RNA.720-201ENST00000517166 92 ntBASIC5.79□□□□□ -1.48
CNTN3Q9P232 MTND4P7-201ENST00000523876 130 ntBASIC5.79□□□□□ -1.48
CNTN3Q9P232 AC103843.2-201ENST00000530523 682 ntBASIC5.79□□□□□ -1.48
CNTN3Q9P232 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.79□□□□□ -1.48
CNTN3Q9P232 AC100830.2-201ENST00000581636 240 ntBASIC5.79□□□□□ -1.48
CNTN3Q9P232 MIR3668-201ENST00000582138 75 ntBASIC5.79□□□□□ -1.48
CNTN3Q9P232 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5.79□□□□□ -1.48
CNTN3Q9P232 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.79□□□□□ -1.48
CNTN3Q9P232 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.79□□□□□ -1.48
CNTN3Q9P232 RNU6-156P-201ENST00000621869 107 ntBASIC5.79□□□□□ -1.48
CNTN3Q9P232 AL359757.2-201ENST00000624309 274 ntBASIC5.79□□□□□ -1.48
CNTN3Q9P232 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms