Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
MKS1Q9NXB0 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
MKS1Q9NXB0 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
MKS1Q9NXB0 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
MKS1Q9NXB0 AC024560.2-201ENST00000507981 1497 ntBASIC4.69□□□□□ -1.66
MKS1Q9NXB0 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.69□□□□□ -1.66
MKS1Q9NXB0 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.69□□□□□ -1.66
MKS1Q9NXB0 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.69□□□□□ -1.66
MKS1Q9NXB0 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
MKS1Q9NXB0 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
MKS1Q9NXB0 RNU1-108P-201ENST00000362556 161 ntBASIC4.69□□□□□ -1.66
MKS1Q9NXB0 RNA5SP28-201ENST00000363841 119 ntBASIC4.69□□□□□ -1.66
MKS1Q9NXB0 RNA5SP242-201ENST00000364171 118 ntBASIC4.69□□□□□ -1.66
MKS1Q9NXB0 Y_RNA.296-201ENST00000364930 108 ntBASIC4.69□□□□□ -1.66
MKS1Q9NXB0 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.69□□□□□ -1.66
MKS1Q9NXB0 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
MKS1Q9NXB0 RPL23AP32-201ENST00000395315 459 ntBASIC4.69□□□□□ -1.66
MKS1Q9NXB0 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
MKS1Q9NXB0 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.69□□□□□ -1.66
MKS1Q9NXB0 RNU6ATAC25P-201ENST00000408798 117 ntBASIC4.69□□□□□ -1.66
MKS1Q9NXB0 OR3A2-201ENST00000408891 1076 ntBASIC4.69□□□□□ -1.66
MKS1Q9NXB0 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.69□□□□□ -1.66
MKS1Q9NXB0 RPL35AP24-201ENST00000413846 330 ntBASIC4.69□□□□□ -1.66
MKS1Q9NXB0 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.69□□□□□ -1.66
MKS1Q9NXB0 PIGFP2-201ENST00000421400 651 ntBASIC4.69□□□□□ -1.66
MKS1Q9NXB0 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.69□□□□□ -1.66
MKS1Q9NXB0 AC233728.2-201ENST00000425348 757 ntBASIC4.69□□□□□ -1.66
MKS1Q9NXB0 RPL21P91-201ENST00000429231 479 ntBASIC4.69□□□□□ -1.66
MKS1Q9NXB0 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.69□□□□□ -1.66
MKS1Q9NXB0 CFL1P1-202ENST00000432948 411 ntBASIC4.69□□□□□ -1.66
MKS1Q9NXB0 MTND3P21-201ENST00000433774 331 ntBASIC4.69□□□□□ -1.66
MKS1Q9NXB0 MTND4LP10-201ENST00000435146 291 ntBASIC4.69□□□□□ -1.66
MKS1Q9NXB0 MTATP6P13-201ENST00000438531 667 ntBASIC4.69□□□□□ -1.66
MKS1Q9NXB0 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.69□□□□□ -1.66
MKS1Q9NXB0 CBX1P1-201ENST00000440184 427 ntBASIC4.69□□□□□ -1.66
MKS1Q9NXB0 AL163193.1-201ENST00000444895 788 ntBASIC4.69□□□□□ -1.66
MKS1Q9NXB0 H2AFZP5-201ENST00000446960 382 ntBASIC4.69□□□□□ -1.66
MKS1Q9NXB0 RBM43P1-201ENST00000476891 1081 ntBASIC4.69□□□□□ -1.66
MKS1Q9NXB0 AC126182.1-201ENST00000478134 357 ntBASIC4.69□□□□□ -1.66
MKS1Q9NXB0 RPS4XP1-201ENST00000482189 787 ntBASIC4.69□□□□□ -1.66
MKS1Q9NXB0 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.69□□□□□ -1.66
MKS1Q9NXB0 SNRPCP2-201ENST00000504370 475 ntBASIC4.69□□□□□ -1.66
MKS1Q9NXB0 AC114967.1-201ENST00000504890 259 ntBASIC4.69□□□□□ -1.66
MKS1Q9NXB0 AC108078.1-201ENST00000508073 725 ntBASIC4.69□□□□□ -1.66
MKS1Q9NXB0 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.69□□□□□ -1.66
MKS1Q9NXB0 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.69□□□□□ -1.66
MKS1Q9NXB0 MTND4LP26-201ENST00000518144 282 ntBASIC4.69□□□□□ -1.66
MKS1Q9NXB0 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.69□□□□□ -1.66
MKS1Q9NXB0 CR383656.7-201ENST00000548164 174 ntBASIC4.69□□□□□ -1.66
MKS1Q9NXB0 HAUS8P1-201ENST00000549005 542 ntBASIC4.69□□□□□ -1.66
MKS1Q9NXB0 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
MKS1Q9NXB0 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.69□□□□□ -1.66
MKS1Q9NXB0 AC099489.2-201ENST00000574976 260 ntBASIC4.69□□□□□ -1.66
MKS1Q9NXB0 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.69□□□□□ -1.66
MKS1Q9NXB0 SNORD95-201ENST00000579879 68 ntBASIC4.69□□□□□ -1.66
MKS1Q9NXB0 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.69□□□□□ -1.66
MKS1Q9NXB0 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.69□□□□□ -1.66
MKS1Q9NXB0 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.69□□□□□ -1.66
MKS1Q9NXB0 AC011445.2-201ENST00000599274 173 ntBASIC4.69□□□□□ -1.66
MKS1Q9NXB0 AC245014.2-201ENST00000603689 287 ntBASIC4.69□□□□□ -1.66
MKS1Q9NXB0 AC246785.4-201ENST00000605374 287 ntBASIC4.69□□□□□ -1.66
MKS1Q9NXB0 AC126118.1-201ENST00000607744 628 ntBASIC4.69□□□□□ -1.66
MKS1Q9NXB0 U6atac.1-201ENST00000616025 117 ntBASIC4.69□□□□□ -1.66
MKS1Q9NXB0 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.69□□□□□ -1.66
MKS1Q9NXB0 MIR7154-201ENST00000620673 73 ntBASIC4.69□□□□□ -1.66
MKS1Q9NXB0 AL732618.1-201ENST00000623251 301 ntBASIC4.69□□□□□ -1.66
MKS1Q9NXB0 AL160394.1-201ENST00000624765 724 ntBASIC4.69□□□□□ -1.66
MKS1Q9NXB0 OR5H6-203ENST00000642105 978 ntBASIC4.69□□□□□ -1.66
MKS1Q9NXB0 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
MKS1Q9NXB0 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.69□□□□□ -1.66
MKS1Q9NXB0 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
MKS1Q9NXB0 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
MKS1Q9NXB0 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.69□□□□□ -1.66
MKS1Q9NXB0 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.69□□□□□ -1.66
MKS1Q9NXB0 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
MKS1Q9NXB0 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.68□□□□□ -1.66
MKS1Q9NXB0 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
MKS1Q9NXB0 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.68□□□□□ -1.66
MKS1Q9NXB0 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.68□□□□□ -1.66
MKS1Q9NXB0 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
MKS1Q9NXB0 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
MKS1Q9NXB0 AC244517.1-201ENST00000606030 2086 ntBASIC4.68□□□□□ -1.66
MKS1Q9NXB0 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
MKS1Q9NXB0 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
MKS1Q9NXB0 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
MKS1Q9NXB0 RNU6-1249P-201ENST00000363237 111 ntBASIC4.68□□□□□ -1.66
MKS1Q9NXB0 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.68□□□□□ -1.66
MKS1Q9NXB0 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.68□□□□□ -1.66
MKS1Q9NXB0 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
MKS1Q9NXB0 AC114755.2-201ENST00000413520 361 ntBASIC4.68□□□□□ -1.66
MKS1Q9NXB0 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.68□□□□□ -1.66
MKS1Q9NXB0 CHEK2P5-201ENST00000423877 246 ntBASIC4.68□□□□□ -1.66
MKS1Q9NXB0 AL358934.1-201ENST00000432346 324 ntBASIC4.68□□□□□ -1.66
MKS1Q9NXB0 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.68□□□□□ -1.66
MKS1Q9NXB0 SLC25A18P1-201ENST00000449385 454 ntBASIC4.68□□□□□ -1.66
MKS1Q9NXB0 MTCO3P20-201ENST00000454926 688 ntBASIC4.68□□□□□ -1.66
MKS1Q9NXB0 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
MKS1Q9NXB0 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.68□□□□□ -1.66
MKS1Q9NXB0 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.68□□□□□ -1.66
MKS1Q9NXB0 RN7SL319P-201ENST00000480656 221 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 140.8 ms