Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
KIAA1549Q9HCM3 ZNF861P-201ENST00000588126 639 ntBASIC2.4□□□□□ -2.03
KIAA1549Q9HCM3 AC010338.1-201ENST00000621823 717 ntBASIC2.4□□□□□ -2.03
KIAA1549Q9HCM3 AC116563.2-201ENST00000624751 535 ntBASIC2.4□□□□□ -2.03
KIAA1549Q9HCM3 SNORA50A-202ENST00000629536 136 ntBASIC2.4□□□□□ -2.03
KIAA1549Q9HCM3 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
KIAA1549Q9HCM3 AC096656.1-201ENST00000623826 1364 ntBASIC2.39□□□□□ -2.03
KIAA1549Q9HCM3 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
KIAA1549Q9HCM3 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
KIAA1549Q9HCM3 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
KIAA1549Q9HCM3 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
KIAA1549Q9HCM3 MIR196B-201ENST00000384852 84 ntBASIC2.39□□□□□ -2.03
KIAA1549Q9HCM3 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC2.39□□□□□ -2.03
KIAA1549Q9HCM3 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.39□□□□□ -2.03
KIAA1549Q9HCM3 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.39□□□□□ -2.03
KIAA1549Q9HCM3 VN1R48P-201ENST00000448149 1036 ntBASIC2.39□□□□□ -2.03
KIAA1549Q9HCM3 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.39□□□□□ -2.03
KIAA1549Q9HCM3 AC005921.1-201ENST00000510589 286 ntBASIC2.39□□□□□ -2.03
KIAA1549Q9HCM3 OR8L1P-201ENST00000534005 955 ntBASIC2.39□□□□□ -2.03
KIAA1549Q9HCM3 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.39□□□□□ -2.03
KIAA1549Q9HCM3 AC005951.1-201ENST00000576706 485 ntBASIC2.39□□□□□ -2.03
KIAA1549Q9HCM3 NF1P5-201ENST00000588287 448 ntBASIC2.39□□□□□ -2.03
KIAA1549Q9HCM3 SNORA35B-201ENST00000607417 129 ntBASIC2.39□□□□□ -2.03
KIAA1549Q9HCM3 AC013412.1-201ENST00000610687 192 ntBASIC2.39□□□□□ -2.03
KIAA1549Q9HCM3 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
KIAA1549Q9HCM3 AP003072.4-201ENST00000624580 310 ntBASIC2.39□□□□□ -2.03
KIAA1549Q9HCM3 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
KIAA1549Q9HCM3 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.39□□□□□ -2.03
KIAA1549Q9HCM3 DCAF13P1-201ENST00000495256 1330 ntBASIC2.39□□□□□ -2.03
KIAA1549Q9HCM3 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
KIAA1549Q9HCM3 AL049780.3-201ENST00000624612 1583 ntBASIC2.38□□□□□ -2.03
KIAA1549Q9HCM3 AC138915.3-201ENST00000562908 1389 ntBASIC2.38□□□□□ -2.03
KIAA1549Q9HCM3 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
KIAA1549Q9HCM3 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
KIAA1549Q9HCM3 SNORA25.6-201ENST00000364121 118 ntBASIC2.38□□□□□ -2.03
KIAA1549Q9HCM3 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
KIAA1549Q9HCM3 MYL8P-204ENST00000431574 518 ntBASIC2.38□□□□□ -2.03
KIAA1549Q9HCM3 AC007563.3-201ENST00000433233 371 ntBASIC2.38□□□□□ -2.03
KIAA1549Q9HCM3 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.38□□□□□ -2.03
KIAA1549Q9HCM3 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.38□□□□□ -2.03
KIAA1549Q9HCM3 AC008280.2-201ENST00000455473 307 ntBASIC2.38□□□□□ -2.03
KIAA1549Q9HCM3 RPL23AP11-201ENST00000475260 469 ntBASIC2.38□□□□□ -2.03
KIAA1549Q9HCM3 AC092451.1-201ENST00000480211 153 ntBASIC2.38□□□□□ -2.03
KIAA1549Q9HCM3 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.38□□□□□ -2.03
KIAA1549Q9HCM3 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC2.38□□□□□ -2.03
KIAA1549Q9HCM3 RNU1-41P-201ENST00000516161 162 ntBASIC2.38□□□□□ -2.03
KIAA1549Q9HCM3 RNU1-48P-201ENST00000516400 162 ntBASIC2.38□□□□□ -2.03
KIAA1549Q9HCM3 RPL12P22-201ENST00000519073 490 ntBASIC2.38□□□□□ -2.03
KIAA1549Q9HCM3 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC2.38□□□□□ -2.03
KIAA1549Q9HCM3 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.38□□□□□ -2.03
KIAA1549Q9HCM3 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC2.38□□□□□ -2.03
KIAA1549Q9HCM3 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.38□□□□□ -2.03
KIAA1549Q9HCM3 AC110774.1-201ENST00000623567 2018 ntBASIC2.38□□□□□ -2.03
KIAA1549Q9HCM3 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
KIAA1549Q9HCM3 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC2.38□□□□□ -2.03
KIAA1549Q9HCM3 AL672167.1-206ENST00000356293 943 ntBASIC2.38□□□□□ -2.03
KIAA1549Q9HCM3 HMGB1P13-201ENST00000406019 642 ntBASIC2.38□□□□□ -2.03
KIAA1549Q9HCM3 AC063976.3-201ENST00000426849 329 ntBASIC2.38□□□□□ -2.03
KIAA1549Q9HCM3 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.38□□□□□ -2.03
KIAA1549Q9HCM3 PTP4A1P3-201ENST00000433661 420 ntBASIC2.38□□□□□ -2.03
KIAA1549Q9HCM3 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC2.38□□□□□ -2.03
KIAA1549Q9HCM3 NPM1P13-201ENST00000452663 865 ntBASIC2.38□□□□□ -2.03
KIAA1549Q9HCM3 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
KIAA1549Q9HCM3 RNA5SP320-201ENST00000516263 124 ntBASIC2.38□□□□□ -2.03
KIAA1549Q9HCM3 SNORA31.15-201ENST00000516771 132 ntBASIC2.38□□□□□ -2.03
KIAA1549Q9HCM3 AC007536.1-201ENST00000533382 349 ntBASIC2.38□□□□□ -2.03
KIAA1549Q9HCM3 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.38□□□□□ -2.03
KIAA1549Q9HCM3 AC079089.3-201ENST00000603094 673 ntBASIC2.38□□□□□ -2.03
KIAA1549Q9HCM3 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC2.38□□□□□ -2.03
KIAA1549Q9HCM3 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.38□□□□□ -2.03
KIAA1549Q9HCM3 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.38□□□□□ -2.03
KIAA1549Q9HCM3 AC121761.2-201ENST00000617300 689 ntBASIC2.38□□□□□ -2.03
KIAA1549Q9HCM3 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
KIAA1549Q9HCM3 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
KIAA1549Q9HCM3 AC104446.1-201ENST00000613728 1321 ntBASIC2.37□□□□□ -2.03
KIAA1549Q9HCM3 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
KIAA1549Q9HCM3 MTCO1P24-201ENST00000515438 1558 ntBASIC2.37□□□□□ -2.03
KIAA1549Q9HCM3 FAM35CP-201ENST00000554755 2470 ntBASIC2.37□□□□□ -2.03
KIAA1549Q9HCM3 AC016717.2-201ENST00000609089 5141 ntBASIC2.37□□□□□ -2.03
KIAA1549Q9HCM3 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
KIAA1549Q9HCM3 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
KIAA1549Q9HCM3 AL139095.1-201ENST00000404326 391 ntBASIC2.37□□□□□ -2.03
KIAA1549Q9HCM3 SDCBPP3-201ENST00000419629 891 ntBASIC2.37□□□□□ -2.03
KIAA1549Q9HCM3 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.37□□□□□ -2.03
KIAA1549Q9HCM3 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.37□□□□□ -2.03
KIAA1549Q9HCM3 AL031736.2-201ENST00000426573 787 ntBASIC2.37□□□□□ -2.03
KIAA1549Q9HCM3 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.37□□□□□ -2.03
KIAA1549Q9HCM3 SAR1AP4-201ENST00000429225 591 ntBASIC2.37□□□□□ -2.03
KIAA1549Q9HCM3 MTND2P8-201ENST00000450555 1025 ntBASIC2.37□□□□□ -2.03
KIAA1549Q9HCM3 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC2.37□□□□□ -2.03
KIAA1549Q9HCM3 RNA5SP76-201ENST00000516277 87 ntBASIC2.37□□□□□ -2.03
KIAA1549Q9HCM3 RNA5SP148-201ENST00000516527 94 ntBASIC2.37□□□□□ -2.03
KIAA1549Q9HCM3 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.37□□□□□ -2.03
KIAA1549Q9HCM3 OR6C73P-201ENST00000546432 358 ntBASIC2.37□□□□□ -2.03
KIAA1549Q9HCM3 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.37□□□□□ -2.03
KIAA1549Q9HCM3 MTCO3P13-201ENST00000577757 781 ntBASIC2.37□□□□□ -2.03
KIAA1549Q9HCM3 AC022884.3-201ENST00000579571 248 ntBASIC2.37□□□□□ -2.03
KIAA1549Q9HCM3 RPL12P50-201ENST00000603116 116 ntBASIC2.37□□□□□ -2.03
KIAA1549Q9HCM3 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.37□□□□□ -2.03
KIAA1549Q9HCM3 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 149.6 ms