Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AC068587.2-201ENST00000478386 781 ntBASIC2.39□□□□□ -2.03
CHD8Q9HCK8 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC2.39□□□□□ -2.03
CHD8Q9HCK8 AC234775.3-201ENST00000564612 656 ntBASIC2.39□□□□□ -2.03
CHD8Q9HCK8 ZNF861P-201ENST00000588126 639 ntBASIC2.39□□□□□ -2.03
CHD8Q9HCK8 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.39□□□□□ -2.03
CHD8Q9HCK8 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC2.38□□□□□ -2.03
CHD8Q9HCK8 AC007064.1-201ENST00000412238 351 ntBASIC2.38□□□□□ -2.03
CHD8Q9HCK8 IGHV3-63-201ENST00000518422 341 ntBASIC2.38□□□□□ -2.03
CHD8Q9HCK8 AP001636.2-201ENST00000525517 696 ntBASIC2.38□□□□□ -2.03
CHD8Q9HCK8 HPRT1P3-201ENST00000539521 576 ntBASIC2.38□□□□□ -2.03
CHD8Q9HCK8 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC2.38□□□□□ -2.03
CHD8Q9HCK8 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CHD8Q9HCK8 AP000919.1-202ENST00000581139 1264 ntBASIC2.38□□□□□ -2.03
CHD8Q9HCK8 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.38□□□□□ -2.03
CHD8Q9HCK8 7SK.7-201ENST00000603504 247 ntBASIC2.38□□□□□ -2.03
CHD8Q9HCK8 AC022709.1-201ENST00000615967 87 ntBASIC2.38□□□□□ -2.03
CHD8Q9HCK8 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CHD8Q9HCK8 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
CHD8Q9HCK8 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.38□□□□□ -2.03
CHD8Q9HCK8 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CHD8Q9HCK8 AL512646.1-201ENST00000269395 1077 ntBASIC2.38□□□□□ -2.03
CHD8Q9HCK8 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
CHD8Q9HCK8 RNU6-356P-201ENST00000384140 107 ntBASIC2.38□□□□□ -2.03
CHD8Q9HCK8 GLS-203ENST00000409215 632 ntTSL 4 BASIC2.38□□□□□ -2.03
CHD8Q9HCK8 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.38□□□□□ -2.03
CHD8Q9HCK8 MTND2P11-201ENST00000423638 648 ntBASIC2.38□□□□□ -2.03
CHD8Q9HCK8 RPL23AP76-201ENST00000441860 458 ntBASIC2.38□□□□□ -2.03
CHD8Q9HCK8 RPL29P29-201ENST00000448725 423 ntBASIC2.38□□□□□ -2.03
CHD8Q9HCK8 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.38□□□□□ -2.03
CHD8Q9HCK8 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.38□□□□□ -2.03
CHD8Q9HCK8 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.38□□□□□ -2.03
CHD8Q9HCK8 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC2.38□□□□□ -2.03
CHD8Q9HCK8 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CHD8Q9HCK8 MTND5P6-201ENST00000422338 1798 ntBASIC2.37□□□□□ -2.03
CHD8Q9HCK8 FRG1BP-201ENST00000278882 761 ntBASIC2.37□□□□□ -2.03
CHD8Q9HCK8 RNA5SP88-201ENST00000365560 109 ntBASIC2.37□□□□□ -2.03
CHD8Q9HCK8 RNU2-68P-201ENST00000410878 191 ntBASIC2.37□□□□□ -2.03
CHD8Q9HCK8 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.37□□□□□ -2.03
CHD8Q9HCK8 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.37□□□□□ -2.03
CHD8Q9HCK8 HMGB3P11-201ENST00000440127 604 ntBASIC2.37□□□□□ -2.03
CHD8Q9HCK8 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.37□□□□□ -2.03
CHD8Q9HCK8 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC2.37□□□□□ -2.03
CHD8Q9HCK8 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.37□□□□□ -2.03
CHD8Q9HCK8 RPAP2P1-201ENST00000603626 1168 ntBASIC2.37□□□□□ -2.03
CHD8Q9HCK8 AL356490.1-201ENST00000623079 479 ntBASIC2.37□□□□□ -2.03
CHD8Q9HCK8 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CHD8Q9HCK8 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.37□□□□□ -2.03
CHD8Q9HCK8 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CHD8Q9HCK8 RNU6-37P-201ENST00000362692 107 ntBASIC2.37□□□□□ -2.03
CHD8Q9HCK8 RNU6-11P-201ENST00000364234 107 ntBASIC2.37□□□□□ -2.03
CHD8Q9HCK8 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
CHD8Q9HCK8 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CHD8Q9HCK8 SPA17P1-201ENST00000416656 452 ntBASIC2.37□□□□□ -2.03
CHD8Q9HCK8 AC092473.1-201ENST00000441098 221 ntBASIC2.37□□□□□ -2.03
CHD8Q9HCK8 RN7SL93P-201ENST00000463035 293 ntBASIC2.37□□□□□ -2.03
CHD8Q9HCK8 RPL31P41-201ENST00000477967 372 ntBASIC2.37□□□□□ -2.03
CHD8Q9HCK8 AC034244.2-201ENST00000514668 858 ntBASIC2.37□□□□□ -2.03
CHD8Q9HCK8 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.37□□□□□ -2.03
CHD8Q9HCK8 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.37□□□□□ -2.03
CHD8Q9HCK8 AC009237.17-201ENST00000618111 748 ntBASIC2.37□□□□□ -2.03
CHD8Q9HCK8 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.37□□□□□ -2.03
CHD8Q9HCK8 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC2.37□□□□□ -2.03
CHD8Q9HCK8 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
CHD8Q9HCK8 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CHD8Q9HCK8 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
CHD8Q9HCK8 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CHD8Q9HCK8 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.36□□□□□ -2.03
CHD8Q9HCK8 MTND2P29-201ENST00000438595 412 ntBASIC2.36□□□□□ -2.03
CHD8Q9HCK8 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC2.36□□□□□ -2.03
CHD8Q9HCK8 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC2.36□□□□□ -2.03
CHD8Q9HCK8 RNU4ATAC6P-201ENST00000516592 126 ntBASIC2.36□□□□□ -2.03
CHD8Q9HCK8 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.36□□□□□ -2.03
CHD8Q9HCK8 AC233702.9-201ENST00000581528 203 ntBASIC2.36□□□□□ -2.03
CHD8Q9HCK8 AL031274.2-201ENST00000599419 203 ntBASIC2.36□□□□□ -2.03
CHD8Q9HCK8 AC005046.1-201ENST00000608515 625 ntBASIC2.36□□□□□ -2.03
CHD8Q9HCK8 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC2.36□□□□□ -2.03
CHD8Q9HCK8 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
CHD8Q9HCK8 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.36□□□□□ -2.03
CHD8Q9HCK8 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CHD8Q9HCK8 Z73965.1-201ENST00000623412 2297 ntBASIC2.36□□□□□ -2.03
CHD8Q9HCK8 AL031985.3-201ENST00000565390 2449 ntBASIC2.36□□□□□ -2.03
CHD8Q9HCK8 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CHD8Q9HCK8 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CHD8Q9HCK8 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CHD8Q9HCK8 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CHD8Q9HCK8 Y_RNA.433-201ENST00000384089 102 ntBASIC2.36□□□□□ -2.03
CHD8Q9HCK8 MIR598-201ENST00000384868 97 ntBASIC2.36□□□□□ -2.03
CHD8Q9HCK8 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.36□□□□□ -2.03
CHD8Q9HCK8 RPL12P18-201ENST00000437175 325 ntBASIC2.36□□□□□ -2.03
CHD8Q9HCK8 AC093767.1-201ENST00000504523 156 ntBASIC2.36□□□□□ -2.03
CHD8Q9HCK8 FTH1P11-201ENST00000517577 551 ntBASIC2.36□□□□□ -2.03
CHD8Q9HCK8 DDX10P1-201ENST00000448545 1933 ntBASIC2.35□□□□□ -2.03
CHD8Q9HCK8 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
CHD8Q9HCK8 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CHD8Q9HCK8 AL606537.1-201ENST00000607258 2011 ntBASIC2.35□□□□□ -2.03
CHD8Q9HCK8 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CHD8Q9HCK8 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
CHD8Q9HCK8 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CHD8Q9HCK8 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
CHD8Q9HCK8 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms