Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.41□□□□□ -1.7
USP29Q9HBJ7 MTND1P15-201ENST00000579262 949 ntBASIC4.41□□□□□ -1.7
USP29Q9HBJ7 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.41□□□□□ -1.7
USP29Q9HBJ7 AC083760.1-201ENST00000589621 670 ntBASIC4.41□□□□□ -1.7
USP29Q9HBJ7 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.41□□□□□ -1.7
USP29Q9HBJ7 AC015871.2-201ENST00000603605 948 ntBASIC4.41□□□□□ -1.7
USP29Q9HBJ7 AC107304.1-201ENST00000604229 296 ntBASIC4.41□□□□□ -1.7
USP29Q9HBJ7 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.41□□□□□ -1.7
USP29Q9HBJ7 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.41□□□□□ -1.7
USP29Q9HBJ7 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
USP29Q9HBJ7 uc_338.13-201ENST00000618243 179 ntBASIC4.41□□□□□ -1.7
USP29Q9HBJ7 AL445567.2-201ENST00000618935 498 ntBASIC4.41□□□□□ -1.7
USP29Q9HBJ7 AC018755.4-201ENST00000619715 454 ntBASIC4.41□□□□□ -1.7
USP29Q9HBJ7 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
USP29Q9HBJ7 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.41□□□□□ -1.7
USP29Q9HBJ7 AL356121.2-201ENST00000624715 780 ntBASIC4.41□□□□□ -1.7
USP29Q9HBJ7 AC008013.2-202ENST00000637965 364 ntBASIC4.41□□□□□ -1.7
USP29Q9HBJ7 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
USP29Q9HBJ7 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
USP29Q9HBJ7 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
USP29Q9HBJ7 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
USP29Q9HBJ7 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
USP29Q9HBJ7 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.41□□□□□ -1.7
USP29Q9HBJ7 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
USP29Q9HBJ7 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
USP29Q9HBJ7 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
USP29Q9HBJ7 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.4□□□□□ -1.7
USP29Q9HBJ7 AL049555.1-201ENST00000562834 1933 ntBASIC4.4□□□□□ -1.7
USP29Q9HBJ7 ERCC6-202ENST00000374127 1782 ntBASIC4.4□□□□□ -1.7
USP29Q9HBJ7 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
USP29Q9HBJ7 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.4□□□□□ -1.7
USP29Q9HBJ7 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.4□□□□□ -1.7
USP29Q9HBJ7 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
USP29Q9HBJ7 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
USP29Q9HBJ7 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
USP29Q9HBJ7 AC011266.1-201ENST00000624119 3569 ntBASIC4.4□□□□□ -1.7
USP29Q9HBJ7 RNA5SP502-201ENST00000362694 119 ntBASIC4.4□□□□□ -1.71
USP29Q9HBJ7 RNA5SP366-201ENST00000365454 123 ntBASIC4.4□□□□□ -1.71
USP29Q9HBJ7 RNU6-348P-201ENST00000384386 107 ntBASIC4.4□□□□□ -1.71
USP29Q9HBJ7 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
USP29Q9HBJ7 AL133384.1-201ENST00000412744 351 ntBASIC4.4□□□□□ -1.71
USP29Q9HBJ7 AL161631.1-201ENST00000417933 486 ntBASIC4.4□□□□□ -1.71
USP29Q9HBJ7 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.4□□□□□ -1.71
USP29Q9HBJ7 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.4□□□□□ -1.71
USP29Q9HBJ7 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.4□□□□□ -1.71
USP29Q9HBJ7 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
USP29Q9HBJ7 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.4□□□□□ -1.71
USP29Q9HBJ7 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.4□□□□□ -1.71
USP29Q9HBJ7 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
USP29Q9HBJ7 MTCO1P27-201ENST00000448269 226 ntBASIC4.4□□□□□ -1.71
USP29Q9HBJ7 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.4□□□□□ -1.71
USP29Q9HBJ7 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.4□□□□□ -1.71
USP29Q9HBJ7 RNU7-136P-201ENST00000458819 69 ntBASIC4.4□□□□□ -1.71
USP29Q9HBJ7 UQCRHP4-201ENST00000471686 272 ntBASIC4.4□□□□□ -1.71
USP29Q9HBJ7 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.4□□□□□ -1.71
USP29Q9HBJ7 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.4□□□□□ -1.71
USP29Q9HBJ7 AC096751.1-202ENST00000502691 1067 ntBASIC4.4□□□□□ -1.71
USP29Q9HBJ7 MTND2P33-201ENST00000506452 1031 ntBASIC4.4□□□□□ -1.71
USP29Q9HBJ7 AF213884.2-201ENST00000510417 903 ntBASIC4.4□□□□□ -1.71
USP29Q9HBJ7 CDC42P4-201ENST00000510507 563 ntBASIC4.4□□□□□ -1.71
USP29Q9HBJ7 MRPL49P2-201ENST00000521066 465 ntBASIC4.4□□□□□ -1.71
USP29Q9HBJ7 AGGF1P8-201ENST00000562979 1000 ntBASIC4.4□□□□□ -1.71
USP29Q9HBJ7 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.4□□□□□ -1.71
USP29Q9HBJ7 AC090312.1-201ENST00000580637 348 ntBASIC4.4□□□□□ -1.71
USP29Q9HBJ7 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.4□□□□□ -1.71
USP29Q9HBJ7 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.4□□□□□ -1.71
USP29Q9HBJ7 AP003465.2-201ENST00000602571 373 ntBASIC4.4□□□□□ -1.71
USP29Q9HBJ7 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.4□□□□□ -1.71
USP29Q9HBJ7 MIR3653-201ENST00000625572 110 ntBASIC4.4□□□□□ -1.71
USP29Q9HBJ7 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
USP29Q9HBJ7 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
USP29Q9HBJ7 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
USP29Q9HBJ7 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
USP29Q9HBJ7 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
USP29Q9HBJ7 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
USP29Q9HBJ7 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
USP29Q9HBJ7 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
USP29Q9HBJ7 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
USP29Q9HBJ7 RNU6-777P-201ENST00000364265 104 ntBASIC4.39□□□□□ -1.71
USP29Q9HBJ7 AC019155.1-201ENST00000382242 574 ntBASIC4.39□□□□□ -1.71
USP29Q9HBJ7 SNORA51.6-201ENST00000384151 125 ntBASIC4.39□□□□□ -1.71
USP29Q9HBJ7 MTCYBP36-201ENST00000404146 440 ntBASIC4.39□□□□□ -1.71
USP29Q9HBJ7 RNU2-21P-201ENST00000410368 188 ntBASIC4.39□□□□□ -1.71
USP29Q9HBJ7 RN7SKP27-201ENST00000410684 333 ntBASIC4.39□□□□□ -1.71
USP29Q9HBJ7 RPL23AP26-201ENST00000412728 464 ntBASIC4.39□□□□□ -1.71
USP29Q9HBJ7 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.39□□□□□ -1.71
USP29Q9HBJ7 RPL17P12-201ENST00000413391 526 ntBASIC4.39□□□□□ -1.71
USP29Q9HBJ7 HMGB1P11-201ENST00000413899 637 ntBASIC4.39□□□□□ -1.71
USP29Q9HBJ7 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.39□□□□□ -1.71
USP29Q9HBJ7 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.39□□□□□ -1.71
USP29Q9HBJ7 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
USP29Q9HBJ7 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC4.39□□□□□ -1.71
USP29Q9HBJ7 RPS27AP14-201ENST00000422868 454 ntBASIC4.39□□□□□ -1.71
USP29Q9HBJ7 AL157831.1-201ENST00000426134 473 ntBASIC4.39□□□□□ -1.71
USP29Q9HBJ7 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.39□□□□□ -1.71
USP29Q9HBJ7 AL132765.1-201ENST00000434165 553 ntBASIC4.39□□□□□ -1.71
USP29Q9HBJ7 Z74696.2-201ENST00000436514 498 ntBASIC4.39□□□□□ -1.71
USP29Q9HBJ7 RPL23AP52-201ENST00000439311 478 ntBASIC4.39□□□□□ -1.71
USP29Q9HBJ7 AL831737.1-201ENST00000441288 271 ntBASIC4.39□□□□□ -1.71
USP29Q9HBJ7 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms