Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 COX6CP8-201ENST00000522620 226 ntBASIC6.2□□□□□ -1.42
EFCC1Q9HA90 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC6.2□□□□□ -1.42
EFCC1Q9HA90 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC6.2□□□□□ -1.42
EFCC1Q9HA90 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC6.2□□□□□ -1.42
EFCC1Q9HA90 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC6.2□□□□□ -1.42
EFCC1Q9HA90 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
EFCC1Q9HA90 MIR6758-201ENST00000620653 63 ntBASIC6.2□□□□□ -1.42
EFCC1Q9HA90 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC6.2□□□□□ -1.42
EFCC1Q9HA90 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
EFCC1Q9HA90 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
EFCC1Q9HA90 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC6.2□□□□□ -1.42
EFCC1Q9HA90 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
EFCC1Q9HA90 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
EFCC1Q9HA90 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.19□□□□□ -1.42
EFCC1Q9HA90 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
EFCC1Q9HA90 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
EFCC1Q9HA90 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC6.19□□□□□ -1.42
EFCC1Q9HA90 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
EFCC1Q9HA90 ANAPC1P1-201ENST00000426186 2145 ntBASIC6.19□□□□□ -1.42
EFCC1Q9HA90 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.19□□□□□ -1.42
EFCC1Q9HA90 AC083843.3-201ENST00000623679 2186 ntBASIC6.19□□□□□ -1.42
EFCC1Q9HA90 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
EFCC1Q9HA90 RPL23AP57-201ENST00000332361 466 ntBASIC6.19□□□□□ -1.42
EFCC1Q9HA90 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
EFCC1Q9HA90 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC6.19□□□□□ -1.42
EFCC1Q9HA90 RNU4-1-201ENST00000363925 141 ntBASIC6.19□□□□□ -1.42
EFCC1Q9HA90 RNU6-108P-201ENST00000365558 107 ntBASIC6.19□□□□□ -1.42
EFCC1Q9HA90 RNY4P36-201ENST00000391116 96 ntBASIC6.19□□□□□ -1.42
EFCC1Q9HA90 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
EFCC1Q9HA90 RNU2-6P-201ENST00000411404 190 ntBASIC6.19□□□□□ -1.42
EFCC1Q9HA90 GPS2P1-201ENST00000411761 986 ntBASIC6.19□□□□□ -1.42
EFCC1Q9HA90 RNF10P1-201ENST00000418589 369 ntBASIC6.19□□□□□ -1.42
EFCC1Q9HA90 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC6.19□□□□□ -1.42
EFCC1Q9HA90 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC6.19□□□□□ -1.42
EFCC1Q9HA90 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC6.19□□□□□ -1.42
EFCC1Q9HA90 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC6.19□□□□□ -1.42
EFCC1Q9HA90 HMGB3P15-201ENST00000507326 574 ntBASIC6.19□□□□□ -1.42
EFCC1Q9HA90 CDV3-208ENST00000511392 554 ntTSL 5 BASIC6.19□□□□□ -1.42
EFCC1Q9HA90 PTP4A1P4-201ENST00000512479 322 ntBASIC6.19□□□□□ -1.42
EFCC1Q9HA90 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC6.19□□□□□ -1.42
EFCC1Q9HA90 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC6.19□□□□□ -1.42
EFCC1Q9HA90 SNORA25.17-201ENST00000517184 124 ntBASIC6.19□□□□□ -1.42
EFCC1Q9HA90 AC104986.1-201ENST00000517978 436 ntBASIC6.19□□□□□ -1.42
EFCC1Q9HA90 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC6.19□□□□□ -1.42
EFCC1Q9HA90 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC6.19□□□□□ -1.42
EFCC1Q9HA90 AP003497.1-201ENST00000528472 562 ntBASIC6.19□□□□□ -1.42
EFCC1Q9HA90 AC008033.2-201ENST00000542626 177 ntBASIC6.19□□□□□ -1.42
EFCC1Q9HA90 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC6.19□□□□□ -1.42
EFCC1Q9HA90 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.19□□□□□ -1.42
EFCC1Q9HA90 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC6.19□□□□□ -1.42
EFCC1Q9HA90 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC6.19□□□□□ -1.42
EFCC1Q9HA90 AC104687.2-201ENST00000604442 342 ntBASIC6.19□□□□□ -1.42
EFCC1Q9HA90 ACTR3BP1-201ENST00000605584 1247 ntBASIC6.19□□□□□ -1.42
EFCC1Q9HA90 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC6.19□□□□□ -1.42
EFCC1Q9HA90 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
EFCC1Q9HA90 AC244517.12-201ENST00000623581 663 ntBASIC6.19□□□□□ -1.42
EFCC1Q9HA90 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC6.19□□□□□ -1.42
EFCC1Q9HA90 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
EFCC1Q9HA90 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
EFCC1Q9HA90 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
EFCC1Q9HA90 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
EFCC1Q9HA90 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
EFCC1Q9HA90 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
EFCC1Q9HA90 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.19□□□□□ -1.42
EFCC1Q9HA90 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
EFCC1Q9HA90 AP001642.1-201ENST00000624727 2117 ntBASIC6.19□□□□□ -1.42
EFCC1Q9HA90 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC6.19□□□□□ -1.42
EFCC1Q9HA90 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
EFCC1Q9HA90 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
EFCC1Q9HA90 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC6.18□□□□□ -1.42
EFCC1Q9HA90 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
EFCC1Q9HA90 RBPJP2-201ENST00000618187 1444 ntBASIC6.18□□□□□ -1.42
EFCC1Q9HA90 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
EFCC1Q9HA90 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
EFCC1Q9HA90 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
EFCC1Q9HA90 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
EFCC1Q9HA90 KPNA2P2-201ENST00000419546 1489 ntBASIC6.18□□□□□ -1.42
EFCC1Q9HA90 GNAS-202ENST00000306090 477 ntTSL 5 BASIC6.18□□□□□ -1.42
EFCC1Q9HA90 RPL32P3-201ENST00000359025 275 ntBASIC6.18□□□□□ -1.42
EFCC1Q9HA90 RN7SKP185-201ENST00000362813 326 ntBASIC6.18□□□□□ -1.42
EFCC1Q9HA90 RNU6-1097P-201ENST00000363586 107 ntBASIC6.18□□□□□ -1.42
EFCC1Q9HA90 RNU1-85P-201ENST00000364127 164 ntBASIC6.18□□□□□ -1.42
EFCC1Q9HA90 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
EFCC1Q9HA90 MIR23A-201ENST00000385245 73 ntBASIC6.18□□□□□ -1.42
EFCC1Q9HA90 RNU4-26P-201ENST00000410270 107 ntBASIC6.18□□□□□ -1.42
EFCC1Q9HA90 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC6.18□□□□□ -1.42
EFCC1Q9HA90 AC127526.1-201ENST00000417526 366 ntBASIC6.18□□□□□ -1.42
EFCC1Q9HA90 AC022022.1-201ENST00000430304 178 ntBASIC6.18□□□□□ -1.42
EFCC1Q9HA90 ERLEC1P1-201ENST00000433806 578 ntBASIC6.18□□□□□ -1.42
EFCC1Q9HA90 RPS26P40-201ENST00000435209 294 ntBASIC6.18□□□□□ -1.42
EFCC1Q9HA90 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC6.18□□□□□ -1.42
EFCC1Q9HA90 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
EFCC1Q9HA90 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
EFCC1Q9HA90 GAPDHP25-201ENST00000447061 1001 ntBASIC6.18□□□□□ -1.42
EFCC1Q9HA90 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.18□□□□□ -1.42
EFCC1Q9HA90 Y_RNA.635-201ENST00000459041 101 ntBASIC6.18□□□□□ -1.42
EFCC1Q9HA90 AC026410.2-201ENST00000460281 156 ntBASIC6.18□□□□□ -1.42
EFCC1Q9HA90 OR7H2P-201ENST00000513483 306 ntBASIC6.18□□□□□ -1.42
EFCC1Q9HA90 AC093303.1-201ENST00000514549 295 ntBASIC6.18□□□□□ -1.42
EFCC1Q9HA90 SCARNA24.1-201ENST00000516465 137 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms