Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.35□□□□□ -1.87
NXF3Q9H4D5 OR5H2-201ENST00000355273 945 ntBASIC3.35□□□□□ -1.87
NXF3Q9H4D5 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
NXF3Q9H4D5 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
NXF3Q9H4D5 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.35□□□□□ -1.87
NXF3Q9H4D5 RPL5P18-201ENST00000406671 891 ntBASIC3.35□□□□□ -1.87
NXF3Q9H4D5 SNORA11C-201ENST00000408532 129 ntBASIC3.35□□□□□ -1.87
NXF3Q9H4D5 MIR1303-201ENST00000408625 86 ntBASIC3.35□□□□□ -1.87
NXF3Q9H4D5 RN7SKP220-201ENST00000410611 288 ntBASIC3.35□□□□□ -1.87
NXF3Q9H4D5 RNA5SP31-201ENST00000411144 127 ntBASIC3.35□□□□□ -1.87
NXF3Q9H4D5 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.35□□□□□ -1.87
NXF3Q9H4D5 AL049610.1-201ENST00000423374 372 ntBASIC3.35□□□□□ -1.87
NXF3Q9H4D5 MTCO1P43-201ENST00000431831 488 ntBASIC3.35□□□□□ -1.87
NXF3Q9H4D5 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
NXF3Q9H4D5 MTCYBP31-201ENST00000438855 1122 ntBASIC3.35□□□□□ -1.87
NXF3Q9H4D5 AL158053.1-201ENST00000441503 453 ntBASIC3.35□□□□□ -1.87
NXF3Q9H4D5 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.35□□□□□ -1.87
NXF3Q9H4D5 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.35□□□□□ -1.87
NXF3Q9H4D5 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.35□□□□□ -1.87
NXF3Q9H4D5 AP001486.1-201ENST00000463339 476 ntBASIC3.35□□□□□ -1.87
NXF3Q9H4D5 AP000893.1-201ENST00000474462 794 ntBASIC3.35□□□□□ -1.87
NXF3Q9H4D5 AL049873.1-201ENST00000480540 376 ntBASIC3.35□□□□□ -1.87
NXF3Q9H4D5 RPS4XP22-201ENST00000480755 780 ntBASIC3.35□□□□□ -1.87
NXF3Q9H4D5 RPS3AP14-201ENST00000483907 780 ntBASIC3.35□□□□□ -1.87
NXF3Q9H4D5 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.35□□□□□ -1.87
NXF3Q9H4D5 OR5H3P-201ENST00000502817 919 ntBASIC3.35□□□□□ -1.87
NXF3Q9H4D5 RNU1-103P-201ENST00000516502 125 ntBASIC3.35□□□□□ -1.87
NXF3Q9H4D5 RN7SKP96-201ENST00000516948 297 ntBASIC3.35□□□□□ -1.87
NXF3Q9H4D5 OR6C73P-201ENST00000546432 358 ntBASIC3.35□□□□□ -1.87
NXF3Q9H4D5 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.35□□□□□ -1.87
NXF3Q9H4D5 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.35□□□□□ -1.87
NXF3Q9H4D5 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.35□□□□□ -1.87
NXF3Q9H4D5 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.35□□□□□ -1.87
NXF3Q9H4D5 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.35□□□□□ -1.87
NXF3Q9H4D5 AC026741.1-201ENST00000605892 482 ntBASIC3.35□□□□□ -1.87
NXF3Q9H4D5 AC113194.1-201ENST00000606037 500 ntBASIC3.35□□□□□ -1.87
NXF3Q9H4D5 AC092953.2-201ENST00000608000 699 ntBASIC3.35□□□□□ -1.87
NXF3Q9H4D5 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.35□□□□□ -1.87
NXF3Q9H4D5 STMN1P1-201ENST00000617809 440 ntBASIC3.35□□□□□ -1.87
NXF3Q9H4D5 AL136520.1-201ENST00000600311 1322 ntBASIC3.35□□□□□ -1.87
NXF3Q9H4D5 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
NXF3Q9H4D5 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NXF3Q9H4D5 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC3.35□□□□□ -1.87
NXF3Q9H4D5 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
NXF3Q9H4D5 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
NXF3Q9H4D5 SNORD56.4-201ENST00000363883 71 ntBASIC3.34□□□□□ -1.87
NXF3Q9H4D5 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
NXF3Q9H4D5 AP000567.1-201ENST00000406413 156 ntBASIC3.34□□□□□ -1.87
NXF3Q9H4D5 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.34□□□□□ -1.87
NXF3Q9H4D5 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.34□□□□□ -1.87
NXF3Q9H4D5 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.34□□□□□ -1.87
NXF3Q9H4D5 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.34□□□□□ -1.87
NXF3Q9H4D5 AL096829.2-201ENST00000446582 742 ntBASIC3.34□□□□□ -1.87
NXF3Q9H4D5 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.34□□□□□ -1.87
NXF3Q9H4D5 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.34□□□□□ -1.87
NXF3Q9H4D5 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.34□□□□□ -1.87
NXF3Q9H4D5 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
NXF3Q9H4D5 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.34□□□□□ -1.87
NXF3Q9H4D5 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.34□□□□□ -1.87
NXF3Q9H4D5 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.34□□□□□ -1.87
NXF3Q9H4D5 AC008494.2-201ENST00000514544 370 ntBASIC3.34□□□□□ -1.87
NXF3Q9H4D5 AC112198.4-201ENST00000515450 351 ntBASIC3.34□□□□□ -1.87
NXF3Q9H4D5 RNU1-143P-201ENST00000516296 146 ntBASIC3.34□□□□□ -1.87
NXF3Q9H4D5 SCARNA13-201ENST00000516672 275 ntBASIC3.34□□□□□ -1.87
NXF3Q9H4D5 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.34□□□□□ -1.87
NXF3Q9H4D5 AP003102.1-201ENST00000525638 661 ntBASIC3.34□□□□□ -1.87
NXF3Q9H4D5 OR5AK3P-201ENST00000527486 1297 ntBASIC3.34□□□□□ -1.87
NXF3Q9H4D5 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.34□□□□□ -1.87
NXF3Q9H4D5 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
NXF3Q9H4D5 AP000916.1-201ENST00000533869 835 ntBASIC3.34□□□□□ -1.87
NXF3Q9H4D5 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.34□□□□□ -1.87
NXF3Q9H4D5 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC3.34□□□□□ -1.87
NXF3Q9H4D5 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.34□□□□□ -1.87
NXF3Q9H4D5 AC022146.1-201ENST00000595307 847 ntBASIC3.34□□□□□ -1.87
NXF3Q9H4D5 AC011492.1-201ENST00000600023 315 ntBASIC3.34□□□□□ -1.87
NXF3Q9H4D5 AC245100.7-201ENST00000609678 442 ntBASIC3.34□□□□□ -1.87
NXF3Q9H4D5 U1.23-201ENST00000610293 146 ntBASIC3.34□□□□□ -1.87
NXF3Q9H4D5 RNU1-68P-201ENST00000615382 146 ntBASIC3.34□□□□□ -1.87
NXF3Q9H4D5 AC018926.1-201ENST00000616335 435 ntBASIC3.34□□□□□ -1.87
NXF3Q9H4D5 U1.39-201ENST00000621562 146 ntBASIC3.34□□□□□ -1.87
NXF3Q9H4D5 AC093875.1-201ENST00000623688 504 ntBASIC3.34□□□□□ -1.87
NXF3Q9H4D5 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
NXF3Q9H4D5 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
NXF3Q9H4D5 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
NXF3Q9H4D5 SAGE4P-201ENST00000442271 3381 ntBASIC3.34□□□□□ -1.88
NXF3Q9H4D5 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NXF3Q9H4D5 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NXF3Q9H4D5 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
NXF3Q9H4D5 AL512646.1-201ENST00000269395 1077 ntBASIC3.33□□□□□ -1.88
NXF3Q9H4D5 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
NXF3Q9H4D5 RNU1-75P-201ENST00000347264 129 ntBASIC3.33□□□□□ -1.88
NXF3Q9H4D5 SNORA71.1-201ENST00000364523 117 ntBASIC3.33□□□□□ -1.88
NXF3Q9H4D5 RNU6-481P-201ENST00000384194 107 ntBASIC3.33□□□□□ -1.88
NXF3Q9H4D5 MIR634-201ENST00000385208 97 ntBASIC3.33□□□□□ -1.88
NXF3Q9H4D5 RNU6-1176P-201ENST00000390955 107 ntBASIC3.33□□□□□ -1.88
NXF3Q9H4D5 AC110754.1-201ENST00000399740 601 ntBASIC3.33□□□□□ -1.88
NXF3Q9H4D5 HMGB3P31-201ENST00000413333 595 ntBASIC3.33□□□□□ -1.88
NXF3Q9H4D5 RPL31P2-201ENST00000413849 377 ntBASIC3.33□□□□□ -1.88
NXF3Q9H4D5 ISCA1P2-201ENST00000438679 421 ntBASIC3.33□□□□□ -1.88
NXF3Q9H4D5 AL831737.1-201ENST00000441288 271 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms