Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC2.74□□□□□ -1.97
SLIRPQ9GZT3 RPS17P11-201ENST00000474297 293 ntBASIC2.74□□□□□ -1.97
SLIRPQ9GZT3 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.74□□□□□ -1.97
SLIRPQ9GZT3 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SLIRPQ9GZT3 AC008628.1-201ENST00000508663 265 ntBASIC2.74□□□□□ -1.97
SLIRPQ9GZT3 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SLIRPQ9GZT3 AC109471.1-201ENST00000511631 612 ntBASIC2.74□□□□□ -1.97
SLIRPQ9GZT3 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.74□□□□□ -1.97
SLIRPQ9GZT3 RNA5SP135-201ENST00000517019 125 ntBASIC2.74□□□□□ -1.97
SLIRPQ9GZT3 ARL2BPP5-201ENST00000523141 481 ntBASIC2.74□□□□□ -1.97
SLIRPQ9GZT3 AP003168.1-201ENST00000530091 307 ntBASIC2.74□□□□□ -1.97
SLIRPQ9GZT3 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC2.74□□□□□ -1.97
SLIRPQ9GZT3 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SLIRPQ9GZT3 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.74□□□□□ -1.97
SLIRPQ9GZT3 AC087481.2-201ENST00000565492 330 ntBASIC2.74□□□□□ -1.97
SLIRPQ9GZT3 MIR4284-201ENST00000578924 81 ntBASIC2.74□□□□□ -1.97
SLIRPQ9GZT3 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SLIRPQ9GZT3 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.74□□□□□ -1.97
SLIRPQ9GZT3 AC006504.3-201ENST00000586818 523 ntBASIC2.74□□□□□ -1.97
SLIRPQ9GZT3 CCDC58P3-201ENST00000590792 430 ntBASIC2.74□□□□□ -1.97
SLIRPQ9GZT3 XIAPP1-201ENST00000603162 600 ntBASIC2.74□□□□□ -1.97
SLIRPQ9GZT3 AC002487.1-201ENST00000604565 994 ntBASIC2.74□□□□□ -1.97
SLIRPQ9GZT3 ACTR3BP1-201ENST00000605584 1247 ntBASIC2.74□□□□□ -1.97
SLIRPQ9GZT3 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.74□□□□□ -1.97
SLIRPQ9GZT3 uc_338.25-201ENST00000613756 156 ntBASIC2.74□□□□□ -1.97
SLIRPQ9GZT3 PLCE1P1-201ENST00000622094 305 ntBASIC2.74□□□□□ -1.97
SLIRPQ9GZT3 MIR6730-201ENST00000622213 67 ntBASIC2.74□□□□□ -1.97
SLIRPQ9GZT3 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.74□□□□□ -1.97
SLIRPQ9GZT3 AC093875.1-201ENST00000623688 504 ntBASIC2.74□□□□□ -1.97
SLIRPQ9GZT3 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.74□□□□□ -1.97
SLIRPQ9GZT3 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
SLIRPQ9GZT3 MTND2P41-201ENST00000637599 773 ntBASIC2.74□□□□□ -1.97
SLIRPQ9GZT3 AL392088.2-201ENST00000637607 285 ntBASIC2.74□□□□□ -1.97
SLIRPQ9GZT3 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SLIRPQ9GZT3 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SLIRPQ9GZT3 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.74□□□□□ -1.97
SLIRPQ9GZT3 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SLIRPQ9GZT3 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 RNU6-251P-201ENST00000363235 104 ntBASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 DEFB109C-201ENST00000382575 264 ntBASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 DEFB109B-201ENST00000382656 264 ntBASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 SNORD116-23-201ENST00000384645 92 ntBASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 SNORD17-201ENST00000390930 237 ntBASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 RNU6-821P-201ENST00000390995 107 ntBASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 MTND4P13-201ENST00000402078 1023 ntBASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 AL023807.1-201ENST00000407932 359 ntBASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 TAF13P2-201ENST00000416876 286 ntBASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 RPS6P14-201ENST00000425165 719 ntBASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 AL035410.1-201ENST00000427409 427 ntBASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 BRWD1P3-201ENST00000428816 390 ntBASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 CYCSP4-201ENST00000429682 331 ntBASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 AL512637.2-201ENST00000431287 1256 ntBASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 ATP5JP1-201ENST00000431631 322 ntBASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 AC073143.1-201ENST00000436316 395 ntBASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 AC127537.2-201ENST00000439258 465 ntBASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 RPL23AP16-201ENST00000441715 421 ntBASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 HMGB1P15-201ENST00000453854 435 ntBASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 MTCO3P2-201ENST00000457365 171 ntBASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 SNORD105B-201ENST00000458770 79 ntBASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 RPS7P7-201ENST00000463499 571 ntBASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 XACT-201ENST00000468762 497 ntTSL 5 BASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 PABPC1P3-201ENST00000469174 459 ntBASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 ACTR3P3-201ENST00000480448 893 ntBASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 RN7SL297P-201ENST00000483161 293 ntBASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 VPS26AP1-201ENST00000483197 979 ntBASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 SNORA31.26-201ENST00000517250 137 ntBASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 ZNF705CP-201ENST00000530515 889 ntBASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 AC006518.2-201ENST00000542513 940 ntBASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 AC023575.1-201ENST00000580510 358 ntBASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 AC068790.4-201ENST00000602474 263 ntBASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 AC128687.1-201ENST00000605304 619 ntBASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 AC016877.3-201ENST00000606778 504 ntBASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 AP005229.2-201ENST00000609980 697 ntBASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 MIR7851-201ENST00000610611 160 ntBASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 AL359198.2-201ENST00000611836 194 ntBASIC2.73□□□□□ -1.97
SLIRPQ9GZT3 AL157817.1-201ENST00000614264 790 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms