Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 DYNLL1P6-201ENST00000503440 264 ntBASIC3.8□□□□□ -1.8
SCAPERQ9BY12 AC147055.1-201ENST00000509261 750 ntBASIC3.8□□□□□ -1.8
SCAPERQ9BY12 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.8□□□□□ -1.8
SCAPERQ9BY12 AC019227.1-201ENST00000526902 510 ntBASIC3.8□□□□□ -1.8
SCAPERQ9BY12 OR5AK3P-201ENST00000527486 1297 ntBASIC3.8□□□□□ -1.8
SCAPERQ9BY12 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.8□□□□□ -1.8
SCAPERQ9BY12 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.8□□□□□ -1.8
SCAPERQ9BY12 AL355836.1-201ENST00000555951 870 ntBASIC3.8□□□□□ -1.8
SCAPERQ9BY12 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.79□□□□□ -1.8
SCAPERQ9BY12 BTF3P7-201ENST00000407097 488 ntBASIC3.79□□□□□ -1.8
SCAPERQ9BY12 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.79□□□□□ -1.8
SCAPERQ9BY12 RNA5SP344-201ENST00000411081 104 ntBASIC3.79□□□□□ -1.8
SCAPERQ9BY12 AC007064.1-201ENST00000412238 351 ntBASIC3.79□□□□□ -1.8
SCAPERQ9BY12 AC007390.1-201ENST00000415722 356 ntBASIC3.79□□□□□ -1.8
SCAPERQ9BY12 RPS12P2-201ENST00000439728 269 ntBASIC3.79□□□□□ -1.8
SCAPERQ9BY12 AC108860.1-201ENST00000484521 383 ntBASIC3.79□□□□□ -1.8
SCAPERQ9BY12 AP000857.1-201ENST00000532151 543 ntBASIC3.79□□□□□ -1.8
SCAPERQ9BY12 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.79□□□□□ -1.8
SCAPERQ9BY12 AC010680.4-201ENST00000605334 543 ntBASIC3.79□□□□□ -1.8
SCAPERQ9BY12 CR381653.2-201ENST00000624041 768 ntBASIC3.79□□□□□ -1.8
SCAPERQ9BY12 BX005019.1-201ENST00000561881 1810 ntBASIC3.79□□□□□ -1.8
SCAPERQ9BY12 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.79□□□□□ -1.8
SCAPERQ9BY12 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SCAPERQ9BY12 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SCAPERQ9BY12 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.79□□□□□ -1.8
SCAPERQ9BY12 RNU1-73P-201ENST00000383971 164 ntBASIC3.78□□□□□ -1.8
SCAPERQ9BY12 AL137014.1-201ENST00000420490 1226 ntBASIC3.78□□□□□ -1.8
SCAPERQ9BY12 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.78□□□□□ -1.8
SCAPERQ9BY12 RPL21P99-201ENST00000480369 423 ntBASIC3.78□□□□□ -1.8
SCAPERQ9BY12 RNU6-548P-201ENST00000517083 115 ntBASIC3.78□□□□□ -1.8
SCAPERQ9BY12 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.78□□□□□ -1.8
SCAPERQ9BY12 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.78□□□□□ -1.8
SCAPERQ9BY12 AC009977.1-201ENST00000586015 570 ntBASIC3.78□□□□□ -1.8
SCAPERQ9BY12 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.78□□□□□ -1.8
SCAPERQ9BY12 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.78□□□□□ -1.8
SCAPERQ9BY12 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.78□□□□□ -1.8
SCAPERQ9BY12 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
SCAPERQ9BY12 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.78□□□□□ -1.8
SCAPERQ9BY12 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.78□□□□□ -1.8
SCAPERQ9BY12 AC234781.4-201ENST00000419384 244 ntBASIC3.78□□□□□ -1.8
SCAPERQ9BY12 AC096638.1-201ENST00000444678 216 ntBASIC3.78□□□□□ -1.8
SCAPERQ9BY12 RPL30P9-201ENST00000465586 330 ntBASIC3.78□□□□□ -1.8
SCAPERQ9BY12 RPS27AP9-201ENST00000477681 438 ntBASIC3.78□□□□□ -1.8
SCAPERQ9BY12 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.78□□□□□ -1.8
SCAPERQ9BY12 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SCAPERQ9BY12 RNU6-84P-201ENST00000607737 102 ntBASIC3.78□□□□□ -1.8
SCAPERQ9BY12 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
SCAPERQ9BY12 ZNF72P-201ENST00000425869 1908 ntBASIC3.77□□□□□ -1.81
SCAPERQ9BY12 AC016717.2-201ENST00000609089 5141 ntBASIC3.77□□□□□ -1.81
SCAPERQ9BY12 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SCAPERQ9BY12 AL590004.2-201ENST00000404787 371 ntBASIC3.77□□□□□ -1.81
SCAPERQ9BY12 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.77□□□□□ -1.81
SCAPERQ9BY12 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.77□□□□□ -1.81
SCAPERQ9BY12 AC080125.1-201ENST00000414888 684 ntBASIC3.77□□□□□ -1.81
SCAPERQ9BY12 USP9YP20-201ENST00000419224 558 ntBASIC3.77□□□□□ -1.81
SCAPERQ9BY12 Z99127.2-201ENST00000441426 334 ntBASIC3.77□□□□□ -1.81
SCAPERQ9BY12 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.77□□□□□ -1.81
SCAPERQ9BY12 RPL7P12-201ENST00000446719 750 ntBASIC3.77□□□□□ -1.81
SCAPERQ9BY12 HMGN1P5-201ENST00000448591 263 ntBASIC3.77□□□□□ -1.81
SCAPERQ9BY12 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.77□□□□□ -1.81
SCAPERQ9BY12 HMGB1P25-201ENST00000468402 607 ntBASIC3.77□□□□□ -1.81
SCAPERQ9BY12 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.77□□□□□ -1.81
SCAPERQ9BY12 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.77□□□□□ -1.81
SCAPERQ9BY12 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.77□□□□□ -1.81
SCAPERQ9BY12 AL133271.1-201ENST00000538229 291 ntBASIC3.77□□□□□ -1.81
SCAPERQ9BY12 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.77□□□□□ -1.81
SCAPERQ9BY12 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.77□□□□□ -1.81
SCAPERQ9BY12 AC026634.1-201ENST00000634369 198 ntBASIC3.77□□□□□ -1.81
SCAPERQ9BY12 AC084035.1-201ENST00000634543 607 ntBASIC3.77□□□□□ -1.81
SCAPERQ9BY12 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.77□□□□□ -1.81
SCAPERQ9BY12 AC138915.3-201ENST00000562908 1389 ntBASIC3.77□□□□□ -1.81
SCAPERQ9BY12 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SCAPERQ9BY12 AC087565.3-202ENST00000642085 1603 ntBASIC3.76□□□□□ -1.81
SCAPERQ9BY12 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SCAPERQ9BY12 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SCAPERQ9BY12 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
SCAPERQ9BY12 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.76□□□□□ -1.81
SCAPERQ9BY12 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SCAPERQ9BY12 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.76□□□□□ -1.81
SCAPERQ9BY12 AP001086.1-201ENST00000494882 321 ntBASIC3.76□□□□□ -1.81
SCAPERQ9BY12 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC3.76□□□□□ -1.81
SCAPERQ9BY12 OR5D17P-201ENST00000531492 978 ntBASIC3.76□□□□□ -1.81
SCAPERQ9BY12 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.76□□□□□ -1.81
SCAPERQ9BY12 AP000867.2-201ENST00000532468 320 ntBASIC3.76□□□□□ -1.81
SCAPERQ9BY12 AC007536.1-201ENST00000533382 349 ntBASIC3.76□□□□□ -1.81
SCAPERQ9BY12 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.76□□□□□ -1.81
SCAPERQ9BY12 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.76□□□□□ -1.81
SCAPERQ9BY12 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SCAPERQ9BY12 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SCAPERQ9BY12 MTND5P6-201ENST00000422338 1798 ntBASIC3.75□□□□□ -1.81
SCAPERQ9BY12 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SCAPERQ9BY12 RPL9P7-201ENST00000330965 580 ntBASIC3.75□□□□□ -1.81
SCAPERQ9BY12 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
SCAPERQ9BY12 RNU6-76P-201ENST00000384060 104 ntBASIC3.75□□□□□ -1.81
SCAPERQ9BY12 AL355379.1-201ENST00000405542 640 ntBASIC3.75□□□□□ -1.81
SCAPERQ9BY12 AL356806.1-201ENST00000422524 916 ntBASIC3.75□□□□□ -1.81
SCAPERQ9BY12 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.75□□□□□ -1.81
SCAPERQ9BY12 AL590399.6-201ENST00000446396 307 ntBASIC3.75□□□□□ -1.81
SCAPERQ9BY12 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.75□□□□□ -1.81
SCAPERQ9BY12 AC008280.2-201ENST00000455473 307 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms