Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AL590103.1-201ENST00000434488 307 ntBASIC2.87□□□□□ -1.95
RSPO3Q9BXY4 HMGB1P45-201ENST00000435986 653 ntBASIC2.87□□□□□ -1.95
RSPO3Q9BXY4 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC2.87□□□□□ -1.95
RSPO3Q9BXY4 HMGB1P12-201ENST00000438594 598 ntBASIC2.87□□□□□ -1.95
RSPO3Q9BXY4 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC2.87□□□□□ -1.95
RSPO3Q9BXY4 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.87□□□□□ -1.95
RSPO3Q9BXY4 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.87□□□□□ -1.95
RSPO3Q9BXY4 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
RSPO3Q9BXY4 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC2.87□□□□□ -1.95
RSPO3Q9BXY4 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.87□□□□□ -1.95
RSPO3Q9BXY4 RPL21P18-201ENST00000469899 480 ntBASIC2.87□□□□□ -1.95
RSPO3Q9BXY4 RPS27AP1-201ENST00000475545 471 ntBASIC2.87□□□□□ -1.95
RSPO3Q9BXY4 SETP6-201ENST00000479329 568 ntBASIC2.87□□□□□ -1.95
RSPO3Q9BXY4 AC012181.1-201ENST00000479895 423 ntBASIC2.87□□□□□ -1.95
RSPO3Q9BXY4 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC2.87□□□□□ -1.95
RSPO3Q9BXY4 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.87□□□□□ -1.95
RSPO3Q9BXY4 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.87□□□□□ -1.95
RSPO3Q9BXY4 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.87□□□□□ -1.95
RSPO3Q9BXY4 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC2.87□□□□□ -1.95
RSPO3Q9BXY4 CIR1P1-201ENST00000524055 1133 ntBASIC2.87□□□□□ -1.95
RSPO3Q9BXY4 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC2.87□□□□□ -1.95
RSPO3Q9BXY4 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC2.87□□□□□ -1.95
RSPO3Q9BXY4 OR4T1P-201ENST00000554933 911 ntBASIC2.87□□□□□ -1.95
RSPO3Q9BXY4 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.87□□□□□ -1.95
RSPO3Q9BXY4 BNIP3P40-201ENST00000596017 556 ntBASIC2.87□□□□□ -1.95
RSPO3Q9BXY4 AC096947.1-201ENST00000603233 470 ntBASIC2.87□□□□□ -1.95
RSPO3Q9BXY4 AL158050.2-201ENST00000605336 568 ntBASIC2.87□□□□□ -1.95
RSPO3Q9BXY4 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC2.87□□□□□ -1.95
RSPO3Q9BXY4 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
RSPO3Q9BXY4 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
RSPO3Q9BXY4 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
RSPO3Q9BXY4 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.87□□□□□ -1.95
RSPO3Q9BXY4 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.87□□□□□ -1.95
RSPO3Q9BXY4 GTF2H2B-203ENST00000508065 1432 ntBASIC2.86□□□□□ -1.95
RSPO3Q9BXY4 AL136164.4-201ENST00000625013 2135 ntBASIC2.86□□□□□ -1.95
RSPO3Q9BXY4 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
RSPO3Q9BXY4 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
RSPO3Q9BXY4 RNU6-354P-201ENST00000383862 107 ntBASIC2.86□□□□□ -1.95
RSPO3Q9BXY4 RNU6-610P-201ENST00000384264 107 ntBASIC2.86□□□□□ -1.95
RSPO3Q9BXY4 SNORA54-201ENST00000384281 123 ntBASIC2.86□□□□□ -1.95
RSPO3Q9BXY4 RNU6-1257P-201ENST00000384625 110 ntBASIC2.86□□□□□ -1.95
RSPO3Q9BXY4 RNU6-1000P-201ENST00000391066 106 ntBASIC2.86□□□□□ -1.95
RSPO3Q9BXY4 RNU4-74P-201ENST00000411280 161 ntBASIC2.86□□□□□ -1.95
RSPO3Q9BXY4 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC2.86□□□□□ -1.95
RSPO3Q9BXY4 AC007899.1-201ENST00000412776 775 ntBASIC2.86□□□□□ -1.95
RSPO3Q9BXY4 OR1AA1P-201ENST00000419597 916 ntBASIC2.86□□□□□ -1.95
RSPO3Q9BXY4 AC023128.2-201ENST00000420880 1223 ntBASIC2.86□□□□□ -1.95
RSPO3Q9BXY4 AL031736.2-201ENST00000426573 787 ntBASIC2.86□□□□□ -1.95
RSPO3Q9BXY4 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC2.86□□□□□ -1.95
RSPO3Q9BXY4 TRAPPC13P1-201ENST00000435991 1062 ntBASIC2.86□□□□□ -1.95
RSPO3Q9BXY4 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.86□□□□□ -1.95
RSPO3Q9BXY4 RPS29P6-201ENST00000438196 145 ntBASIC2.86□□□□□ -1.95
RSPO3Q9BXY4 AC006994.1-201ENST00000438212 839 ntBASIC2.86□□□□□ -1.95
RSPO3Q9BXY4 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC2.86□□□□□ -1.95
RSPO3Q9BXY4 RPL37P4-201ENST00000448908 268 ntBASIC2.86□□□□□ -1.95
RSPO3Q9BXY4 HMGN2P16-201ENST00000456802 261 ntBASIC2.86□□□□□ -1.95
RSPO3Q9BXY4 BTF3P5-201ENST00000457252 467 ntBASIC2.86□□□□□ -1.95
RSPO3Q9BXY4 ARPC3P2-201ENST00000457786 533 ntBASIC2.86□□□□□ -1.95
RSPO3Q9BXY4 RPL21P41-201ENST00000459863 264 ntBASIC2.86□□□□□ -1.95
RSPO3Q9BXY4 RPL21P10-201ENST00000463521 490 ntBASIC2.86□□□□□ -1.95
RSPO3Q9BXY4 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC2.86□□□□□ -1.95
RSPO3Q9BXY4 AC025459.1-201ENST00000504072 156 ntBASIC2.86□□□□□ -1.95
RSPO3Q9BXY4 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC2.86□□□□□ -1.95
RSPO3Q9BXY4 RNU5A-7P-201ENST00000515979 116 ntBASIC2.86□□□□□ -1.95
RSPO3Q9BXY4 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC2.86□□□□□ -1.95
RSPO3Q9BXY4 AP000916.1-201ENST00000533869 835 ntBASIC2.86□□□□□ -1.95
RSPO3Q9BXY4 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.86□□□□□ -1.95
RSPO3Q9BXY4 AL163153.1-201ENST00000554223 283 ntBASIC2.86□□□□□ -1.95
RSPO3Q9BXY4 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.86□□□□□ -1.95
RSPO3Q9BXY4 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.86□□□□□ -1.95
RSPO3Q9BXY4 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
RSPO3Q9BXY4 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.86□□□□□ -1.95
RSPO3Q9BXY4 UBL5P2-201ENST00000583788 219 ntBASIC2.86□□□□□ -1.95
RSPO3Q9BXY4 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC2.86□□□□□ -1.95
RSPO3Q9BXY4 SUMO2P14-201ENST00000604488 293 ntBASIC2.86□□□□□ -1.95
RSPO3Q9BXY4 AC112503.2-201ENST00000609005 552 ntBASIC2.86□□□□□ -1.95
RSPO3Q9BXY4 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.86□□□□□ -1.95
RSPO3Q9BXY4 MIR7112-201ENST00000616126 65 ntBASIC2.86□□□□□ -1.95
RSPO3Q9BXY4 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
RSPO3Q9BXY4 AC007318.2-201ENST00000620999 243 ntBASIC2.86□□□□□ -1.95
RSPO3Q9BXY4 AP003485.1-201ENST00000625093 753 ntBASIC2.86□□□□□ -1.95
RSPO3Q9BXY4 AC004808.1-201ENST00000627671 721 ntBASIC2.86□□□□□ -1.95
RSPO3Q9BXY4 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
RSPO3Q9BXY4 METTL8-218ENST00000638989 876 ntTSL 5 BASIC2.86□□□□□ -1.95
RSPO3Q9BXY4 METTL8-219ENST00000640734 726 ntTSL 2 BASIC2.86□□□□□ -1.95
RSPO3Q9BXY4 AL353743.4-201ENST00000422653 1547 ntBASIC2.86□□□□□ -1.95
RSPO3Q9BXY4 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
RSPO3Q9BXY4 MFSD8-213ENST00000641134 1327 ntBASIC2.86□□□□□ -1.95
RSPO3Q9BXY4 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
RSPO3Q9BXY4 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.85□□□□□ -1.95
RSPO3Q9BXY4 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
RSPO3Q9BXY4 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC2.85□□□□□ -1.95
RSPO3Q9BXY4 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
RSPO3Q9BXY4 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
RSPO3Q9BXY4 SNORA38.1-201ENST00000364172 131 ntBASIC2.85□□□□□ -1.95
RSPO3Q9BXY4 SNORD67-201ENST00000390833 111 ntBASIC2.85□□□□□ -1.95
RSPO3Q9BXY4 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.85□□□□□ -1.95
RSPO3Q9BXY4 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.85□□□□□ -1.95
RSPO3Q9BXY4 RPL32P35-201ENST00000415214 394 ntBASIC2.85□□□□□ -1.95
RSPO3Q9BXY4 OR4K6P-201ENST00000416478 897 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms