Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 AC004972.1-201ENST00000623934 2209 ntBASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 MAPK10-338ENST00000641647 3362 ntBASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 RN7SKP145-201ENST00000363291 303 ntBASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 Y_RNA.176-201ENST00000363815 109 ntBASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 RNU6-171P-201ENST00000384354 107 ntBASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 RNA5SP187-201ENST00000384400 119 ntBASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 RN7SKP158-201ENST00000410453 326 ntBASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 RN7SKP247-201ENST00000411094 308 ntBASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 AC234781.4-201ENST00000419384 244 ntBASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 H2AFZP6-201ENST00000444403 394 ntBASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 ELOCP24-201ENST00000456370 334 ntBASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 RPL30P15-201ENST00000457129 321 ntBASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 RPL23AP11-201ENST00000475260 469 ntBASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 RPL23AP72-201ENST00000492447 435 ntBASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 AC106872.2-201ENST00000494303 480 ntBASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 PGAM1P13-201ENST00000507497 754 ntBASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 TXNP6-201ENST00000510190 310 ntBASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 EIF3KP3-201ENST00000514461 639 ntBASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 RN7SKP24-201ENST00000515888 284 ntBASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 RNU6-976P-201ENST00000516086 111 ntBASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 SNORD27.1-201ENST00000516319 72 ntBASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 RNU6-764P-201ENST00000516396 105 ntBASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 RNU6-273P-201ENST00000516937 96 ntBASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 HMGB1P19-201ENST00000517578 577 ntBASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 PTP4A1P6-201ENST00000531034 478 ntBASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 RPL21P12-201ENST00000559810 515 ntBASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 AC010653.1-201ENST00000571108 881 ntBASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 LARP7P2-201ENST00000575306 125 ntBASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 NUTF2P8-201ENST00000604593 363 ntBASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 uc_338.7-201ENST00000621834 124 ntBASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 MTND5P19-201ENST00000424872 1794 ntBASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SSBP3Q9BWW4 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 C4BPAP1-201ENST00000415474 1893 ntBASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 MUC2-202ENST00000613187 4845 ntBASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 AC090337.1-201ENST00000579651 2074 ntBASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 Y_RNA.135-201ENST00000363439 95 ntBASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 Y_RNA.367-201ENST00000365544 101 ntBASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 SNORD3H-201ENST00000384486 214 ntBASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 RNU4-70P-201ENST00000384579 139 ntBASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 MIR454-201ENST00000390180 115 ntBASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 MRPL42P3-201ENST00000401492 326 ntBASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 AC079809.1-201ENST00000415468 276 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms