Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
ABCA3Q99758 RNA5SP445-201ENST00000515889 115 ntBASIC3.28□□□□□ -1.88
ABCA3Q99758 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.28□□□□□ -1.88
ABCA3Q99758 AP001317.1-201ENST00000531194 960 ntBASIC3.28□□□□□ -1.88
ABCA3Q99758 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC3.28□□□□□ -1.88
ABCA3Q99758 CBX3P5-201ENST00000552017 521 ntBASIC3.28□□□□□ -1.88
ABCA3Q99758 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.28□□□□□ -1.88
ABCA3Q99758 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
ABCA3Q99758 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
ABCA3Q99758 AC245100.2-201ENST00000454544 1679 ntBASIC3.27□□□□□ -1.89
ABCA3Q99758 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
ABCA3Q99758 Y_RNA.466-201ENST00000384294 113 ntBASIC3.27□□□□□ -1.89
ABCA3Q99758 RNU6-253P-201ENST00000384730 105 ntBASIC3.27□□□□□ -1.89
ABCA3Q99758 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC3.27□□□□□ -1.89
ABCA3Q99758 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.27□□□□□ -1.89
ABCA3Q99758 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
ABCA3Q99758 MIR6845-201ENST00000613182 61 ntBASIC3.27□□□□□ -1.89
ABCA3Q99758 AC069528.2-201ENST00000624849 1991 ntBASIC3.27□□□□□ -1.89
ABCA3Q99758 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
ABCA3Q99758 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
ABCA3Q99758 EXOC5P1-201ENST00000510543 1969 ntBASIC3.27□□□□□ -1.89
ABCA3Q99758 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.27□□□□□ -1.89
ABCA3Q99758 Z99127.2-201ENST00000441426 334 ntBASIC3.27□□□□□ -1.89
ABCA3Q99758 AC068657.1-201ENST00000520807 306 ntBASIC3.27□□□□□ -1.89
ABCA3Q99758 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.27□□□□□ -1.89
ABCA3Q99758 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.27□□□□□ -1.89
ABCA3Q99758 AP001004.1-201ENST00000582468 324 ntBASIC3.27□□□□□ -1.89
ABCA3Q99758 AC006254.3-201ENST00000603353 884 ntBASIC3.27□□□□□ -1.89
ABCA3Q99758 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
ABCA3Q99758 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.26□□□□□ -1.89
ABCA3Q99758 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
ABCA3Q99758 GSTA9P-201ENST00000406231 611 ntBASIC3.26□□□□□ -1.89
ABCA3Q99758 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC3.26□□□□□ -1.89
ABCA3Q99758 RPL23AP74-201ENST00000437246 471 ntBASIC3.26□□□□□ -1.89
ABCA3Q99758 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
ABCA3Q99758 LINC00888-204ENST00000487386 421 ntBASIC3.26□□□□□ -1.89
ABCA3Q99758 USP9YP5-201ENST00000511770 630 ntBASIC3.26□□□□□ -1.89
ABCA3Q99758 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.26□□□□□ -1.89
ABCA3Q99758 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.26□□□□□ -1.89
ABCA3Q99758 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
ABCA3Q99758 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.25□□□□□ -1.89
ABCA3Q99758 NDUFB4P9-201ENST00000511646 388 ntBASIC3.25□□□□□ -1.89
ABCA3Q99758 SNORA70.14-201ENST00000516205 110 ntBASIC3.25□□□□□ -1.89
ABCA3Q99758 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
ABCA3Q99758 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.25□□□□□ -1.89
ABCA3Q99758 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.25□□□□□ -1.89
ABCA3Q99758 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.25□□□□□ -1.89
ABCA3Q99758 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
ABCA3Q99758 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
ABCA3Q99758 MIR1287-201ENST00000408492 90 ntBASIC3.24□□□□□ -1.89
ABCA3Q99758 RPL31P45-201ENST00000419532 356 ntBASIC3.24□□□□□ -1.89
ABCA3Q99758 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.24□□□□□ -1.89
ABCA3Q99758 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.24□□□□□ -1.89
ABCA3Q99758 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.24□□□□□ -1.89
ABCA3Q99758 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.24□□□□□ -1.89
ABCA3Q99758 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.24□□□□□ -1.89
ABCA3Q99758 AC106872.3-201ENST00000495104 446 ntBASIC3.24□□□□□ -1.89
ABCA3Q99758 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.24□□□□□ -1.89
ABCA3Q99758 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.24□□□□□ -1.89
ABCA3Q99758 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.24□□□□□ -1.89
ABCA3Q99758 AC103710.2-201ENST00000609912 942 ntBASIC3.24□□□□□ -1.89
ABCA3Q99758 FRG1DP-201ENST00000635586 771 ntBASIC3.24□□□□□ -1.89
ABCA3Q99758 RLIMP2-201ENST00000427891 1563 ntBASIC3.24□□□□□ -1.89
ABCA3Q99758 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.24□□□□□ -1.89
ABCA3Q99758 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
ABCA3Q99758 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
ABCA3Q99758 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.24□□□□□ -1.89
ABCA3Q99758 RN7SKP140-201ENST00000411196 284 ntBASIC3.24□□□□□ -1.89
ABCA3Q99758 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.24□□□□□ -1.89
ABCA3Q99758 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.24□□□□□ -1.89
ABCA3Q99758 RPL23AP62-201ENST00000463396 453 ntBASIC3.24□□□□□ -1.89
ABCA3Q99758 AP000926.1-201ENST00000479573 241 ntBASIC3.24□□□□□ -1.89
ABCA3Q99758 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.24□□□□□ -1.89
ABCA3Q99758 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
ABCA3Q99758 RN7SKP282-201ENST00000516824 299 ntBASIC3.24□□□□□ -1.89
ABCA3Q99758 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC3.24□□□□□ -1.89
ABCA3Q99758 AC018630.1-201ENST00000541376 925 ntBASIC3.24□□□□□ -1.89
ABCA3Q99758 BMS1P7-201ENST00000602440 1052 ntBASIC3.24□□□□□ -1.89
ABCA3Q99758 AC046143.2-201ENST00000609789 160 ntBASIC3.24□□□□□ -1.89
ABCA3Q99758 AC009452.1-201ENST00000640823 606 ntBASIC3.24□□□□□ -1.89
ABCA3Q99758 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
ABCA3Q99758 MIR181B1-201ENST00000385240 110 ntBASIC3.23□□□□□ -1.89
ABCA3Q99758 AC107081.1-201ENST00000414975 361 ntBASIC3.23□□□□□ -1.89
ABCA3Q99758 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.23□□□□□ -1.89
ABCA3Q99758 AL592437.1-201ENST00000443781 492 ntBASIC3.23□□□□□ -1.89
ABCA3Q99758 VN1R17P-201ENST00000472048 1090 ntBASIC3.23□□□□□ -1.89
ABCA3Q99758 AC126182.1-201ENST00000478134 357 ntBASIC3.23□□□□□ -1.89
ABCA3Q99758 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.23□□□□□ -1.89
ABCA3Q99758 TXNP6-201ENST00000510190 310 ntBASIC3.23□□□□□ -1.89
ABCA3Q99758 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.23□□□□□ -1.89
ABCA3Q99758 RNA5SP281-201ENST00000516504 135 ntBASIC3.23□□□□□ -1.89
ABCA3Q99758 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.23□□□□□ -1.89
ABCA3Q99758 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ABCA3Q99758 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC3.23□□□□□ -1.89
ABCA3Q99758 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ABCA3Q99758 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.23□□□□□ -1.89
ABCA3Q99758 AL136981.2-201ENST00000617319 734 ntBASIC3.23□□□□□ -1.89
ABCA3Q99758 WWP1P1-201ENST00000466609 2769 ntBASIC3.23□□□□□ -1.89
ABCA3Q99758 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ABCA3Q99758 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms