Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.33□□□□□ -1.88
NPAS2Q99743 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NPAS2Q99743 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NPAS2Q99743 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
NPAS2Q99743 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
NPAS2Q99743 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NPAS2Q99743 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.33□□□□□ -1.88
NPAS2Q99743 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.33□□□□□ -1.88
NPAS2Q99743 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.32□□□□□ -1.88
NPAS2Q99743 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
NPAS2Q99743 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.32□□□□□ -1.88
NPAS2Q99743 AL049781.1-201ENST00000623195 3585 ntBASIC3.32□□□□□ -1.88
NPAS2Q99743 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC3.32□□□□□ -1.88
NPAS2Q99743 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
NPAS2Q99743 OR1L1-202ENST00000373686 1083 ntBASIC3.32□□□□□ -1.88
NPAS2Q99743 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
NPAS2Q99743 RNA5SP129-201ENST00000410276 118 ntBASIC3.32□□□□□ -1.88
NPAS2Q99743 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.32□□□□□ -1.88
NPAS2Q99743 AL133384.1-201ENST00000412744 351 ntBASIC3.32□□□□□ -1.88
NPAS2Q99743 RPS7P15-201ENST00000415804 584 ntBASIC3.32□□□□□ -1.88
NPAS2Q99743 AL356968.1-201ENST00000416622 474 ntBASIC3.32□□□□□ -1.88
NPAS2Q99743 AIMP1P1-201ENST00000418670 937 ntBASIC3.32□□□□□ -1.88
NPAS2Q99743 BX890604.2-201ENST00000427883 474 ntBASIC3.32□□□□□ -1.88
NPAS2Q99743 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.32□□□□□ -1.88
NPAS2Q99743 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.32□□□□□ -1.88
NPAS2Q99743 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.32□□□□□ -1.88
NPAS2Q99743 AC092641.1-201ENST00000440229 772 ntBASIC3.32□□□□□ -1.88
NPAS2Q99743 SEPT14P24-201ENST00000447236 180 ntBASIC3.32□□□□□ -1.88
NPAS2Q99743 AC125238.1-201ENST00000448842 249 ntBASIC3.32□□□□□ -1.88
NPAS2Q99743 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.32□□□□□ -1.88
NPAS2Q99743 MTCO3P2-201ENST00000457365 171 ntBASIC3.32□□□□□ -1.88
NPAS2Q99743 VPS26AP1-201ENST00000483197 979 ntBASIC3.32□□□□□ -1.88
NPAS2Q99743 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NPAS2Q99743 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NPAS2Q99743 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.32□□□□□ -1.88
NPAS2Q99743 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.32□□□□□ -1.88
NPAS2Q99743 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.32□□□□□ -1.88
NPAS2Q99743 RNA5SP135-201ENST00000517019 125 ntBASIC3.32□□□□□ -1.88
NPAS2Q99743 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.32□□□□□ -1.88
NPAS2Q99743 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.32□□□□□ -1.88
NPAS2Q99743 HIGD1AP10-201ENST00000527837 282 ntBASIC3.32□□□□□ -1.88
NPAS2Q99743 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.32□□□□□ -1.88
NPAS2Q99743 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.32□□□□□ -1.88
NPAS2Q99743 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.32□□□□□ -1.88
NPAS2Q99743 RN7SL339P-201ENST00000580597 296 ntBASIC3.32□□□□□ -1.88
NPAS2Q99743 SNORD39.3-201ENST00000584451 71 ntBASIC3.32□□□□□ -1.88
NPAS2Q99743 AC067852.3-201ENST00000589177 561 ntBASIC3.32□□□□□ -1.88
NPAS2Q99743 AC092474.3-201ENST00000603022 568 ntBASIC3.32□□□□□ -1.88
NPAS2Q99743 VIS1.1-201ENST00000610517 203 ntBASIC3.32□□□□□ -1.88
NPAS2Q99743 AC084757.4-201ENST00000616350 526 ntBASIC3.32□□□□□ -1.88
NPAS2Q99743 MIR7975-201ENST00000619350 68 ntBASIC3.32□□□□□ -1.88
NPAS2Q99743 AC092650.2-201ENST00000619984 902 ntBASIC3.32□□□□□ -1.88
NPAS2Q99743 PLCE1P1-201ENST00000622094 305 ntBASIC3.32□□□□□ -1.88
NPAS2Q99743 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.32□□□□□ -1.88
NPAS2Q99743 AP003355.3-201ENST00000623465 114 ntBASIC3.32□□□□□ -1.88
NPAS2Q99743 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NPAS2Q99743 MTND2P41-201ENST00000637599 773 ntBASIC3.32□□□□□ -1.88
NPAS2Q99743 BX649567.1-201ENST00000642071 1134 ntBASIC3.32□□□□□ -1.88
NPAS2Q99743 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NPAS2Q99743 MTCO1P12-201ENST00000414273 1543 ntBASIC3.32□□□□□ -1.88
NPAS2Q99743 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
NPAS2Q99743 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NPAS2Q99743 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NPAS2Q99743 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NPAS2Q99743 DBF4P1-201ENST00000412976 1892 ntBASIC3.32□□□□□ -1.88
NPAS2Q99743 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NPAS2Q99743 AC002546.1-201ENST00000588041 2504 ntBASIC3.32□□□□□ -1.88
NPAS2Q99743 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NPAS2Q99743 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NPAS2Q99743 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.31□□□□□ -1.88
NPAS2Q99743 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
NPAS2Q99743 RNU6-1249P-201ENST00000363237 111 ntBASIC3.31□□□□□ -1.88
NPAS2Q99743 SNORD56.3-201ENST00000363507 71 ntBASIC3.31□□□□□ -1.88
NPAS2Q99743 DEFB109C-201ENST00000382575 264 ntBASIC3.31□□□□□ -1.88
NPAS2Q99743 DEFB109B-201ENST00000382656 264 ntBASIC3.31□□□□□ -1.88
NPAS2Q99743 RNU6-468P-201ENST00000384003 109 ntBASIC3.31□□□□□ -1.88
NPAS2Q99743 U6.112-201ENST00000384129 70 ntBASIC3.31□□□□□ -1.88
NPAS2Q99743 GSTA8P-201ENST00000404253 637 ntBASIC3.31□□□□□ -1.88
NPAS2Q99743 TAF13P2-201ENST00000416876 286 ntBASIC3.31□□□□□ -1.88
NPAS2Q99743 AC245291.1-201ENST00000419501 328 ntBASIC3.31□□□□□ -1.88
NPAS2Q99743 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.31□□□□□ -1.88
NPAS2Q99743 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.31□□□□□ -1.88
NPAS2Q99743 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.31□□□□□ -1.88
NPAS2Q99743 AL592437.1-201ENST00000443781 492 ntBASIC3.31□□□□□ -1.88
NPAS2Q99743 NDUFA5P7-201ENST00000452914 242 ntBASIC3.31□□□□□ -1.88
NPAS2Q99743 PRSS3P4-201ENST00000453323 162 ntBASIC3.31□□□□□ -1.88
NPAS2Q99743 RBMY2UP-201ENST00000453474 324 ntBASIC3.31□□□□□ -1.88
NPAS2Q99743 HMGB1P15-201ENST00000453854 435 ntBASIC3.31□□□□□ -1.88
NPAS2Q99743 AC092754.2-201ENST00000463506 460 ntBASIC3.31□□□□□ -1.88
NPAS2Q99743 AC008155.2-201ENST00000464337 397 ntBASIC3.31□□□□□ -1.88
NPAS2Q99743 PLGLA-201ENST00000465668 449 ntBASIC3.31□□□□□ -1.88
NPAS2Q99743 AC023598.1-201ENST00000472521 361 ntBASIC3.31□□□□□ -1.88
NPAS2Q99743 AL136126.1-201ENST00000473603 402 ntBASIC3.31□□□□□ -1.88
NPAS2Q99743 AC108078.3-201ENST00000502633 489 ntBASIC3.31□□□□□ -1.88
NPAS2Q99743 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NPAS2Q99743 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.31□□□□□ -1.88
NPAS2Q99743 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.31□□□□□ -1.88
NPAS2Q99743 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC3.31□□□□□ -1.88
NPAS2Q99743 AC113192.3-201ENST00000529152 742 ntBASIC3.31□□□□□ -1.88
NPAS2Q99743 AC103843.2-201ENST00000530523 682 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms