Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.03□□□□□ -1.76
IFT140Q96RY7 AL133271.1-201ENST00000538229 291 ntBASIC4.03□□□□□ -1.76
IFT140Q96RY7 SNRPGP18-201ENST00000553000 214 ntBASIC4.03□□□□□ -1.76
IFT140Q96RY7 AGGF1P8-201ENST00000562979 1000 ntBASIC4.03□□□□□ -1.76
IFT140Q96RY7 AP003499.2-201ENST00000624100 483 ntBASIC4.03□□□□□ -1.76
IFT140Q96RY7 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
IFT140Q96RY7 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.02□□□□□ -1.77
IFT140Q96RY7 CUL1P1-201ENST00000509510 2425 ntBASIC4.02□□□□□ -1.77
IFT140Q96RY7 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
IFT140Q96RY7 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
IFT140Q96RY7 AL356292.1-201ENST00000283110 373 ntBASIC4.02□□□□□ -1.77
IFT140Q96RY7 U8.13-201ENST00000390842 128 ntBASIC4.02□□□□□ -1.77
IFT140Q96RY7 AC013410.1-201ENST00000436223 1232 ntBASIC4.02□□□□□ -1.77
IFT140Q96RY7 AC104389.3-201ENST00000445629 235 ntBASIC4.02□□□□□ -1.77
IFT140Q96RY7 AC125238.1-201ENST00000448842 249 ntBASIC4.02□□□□□ -1.77
IFT140Q96RY7 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.02□□□□□ -1.77
IFT140Q96RY7 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.02□□□□□ -1.77
IFT140Q96RY7 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.02□□□□□ -1.77
IFT140Q96RY7 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
IFT140Q96RY7 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
IFT140Q96RY7 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
IFT140Q96RY7 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
IFT140Q96RY7 RN7SKP140-201ENST00000411196 284 ntBASIC4.01□□□□□ -1.77
IFT140Q96RY7 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.01□□□□□ -1.77
IFT140Q96RY7 HMGB1P25-201ENST00000468402 607 ntBASIC4.01□□□□□ -1.77
IFT140Q96RY7 AP000926.3-201ENST00000497201 299 ntBASIC4.01□□□□□ -1.77
IFT140Q96RY7 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC4.01□□□□□ -1.77
IFT140Q96RY7 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC4.01□□□□□ -1.77
IFT140Q96RY7 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.01□□□□□ -1.77
IFT140Q96RY7 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC4.01□□□□□ -1.77
IFT140Q96RY7 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
IFT140Q96RY7 ZNF355P-201ENST00000427301 3216 ntBASIC4.01□□□□□ -1.77
IFT140Q96RY7 WWP1P1-201ENST00000466609 2769 ntBASIC4□□□□□ -1.77
IFT140Q96RY7 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC4□□□□□ -1.77
IFT140Q96RY7 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4□□□□□ -1.77
IFT140Q96RY7 EIF5P1-201ENST00000400019 1231 ntBASIC4□□□□□ -1.77
IFT140Q96RY7 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC4□□□□□ -1.77
IFT140Q96RY7 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC4□□□□□ -1.77
IFT140Q96RY7 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4□□□□□ -1.77
IFT140Q96RY7 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
IFT140Q96RY7 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4□□□□□ -1.77
IFT140Q96RY7 AC104090.1-201ENST00000506341 1171 ntBASIC4□□□□□ -1.77
IFT140Q96RY7 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4□□□□□ -1.77
IFT140Q96RY7 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4□□□□□ -1.77
IFT140Q96RY7 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC4□□□□□ -1.77
IFT140Q96RY7 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
IFT140Q96RY7 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4□□□□□ -1.77
IFT140Q96RY7 AL162233.1-201ENST00000620014 944 ntBASIC4□□□□□ -1.77
IFT140Q96RY7 AC011460.1-201ENST00000636268 1834 ntBASIC4□□□□□ -1.77
IFT140Q96RY7 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
IFT140Q96RY7 RN7SKP44-201ENST00000363602 316 ntBASIC3.99□□□□□ -1.77
IFT140Q96RY7 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.99□□□□□ -1.77
IFT140Q96RY7 MIR1287-201ENST00000408492 90 ntBASIC3.99□□□□□ -1.77
IFT140Q96RY7 Y_RNA.595-201ENST00000410403 105 ntBASIC3.99□□□□□ -1.77
IFT140Q96RY7 XIST-201ENST00000416330 750 ntTSL 2 BASIC3.99□□□□□ -1.77
IFT140Q96RY7 RANP7-201ENST00000418085 644 ntBASIC3.99□□□□□ -1.77
IFT140Q96RY7 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.99□□□□□ -1.77
IFT140Q96RY7 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
IFT140Q96RY7 AC083760.1-201ENST00000589621 670 ntBASIC3.99□□□□□ -1.77
IFT140Q96RY7 MIR6873-201ENST00000622788 63 ntBASIC3.99□□□□□ -1.77
IFT140Q96RY7 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
IFT140Q96RY7 AC093831.2-201ENST00000624393 3427 ntBASIC3.99□□□□□ -1.77
IFT140Q96RY7 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
IFT140Q96RY7 RPL31P45-201ENST00000419532 356 ntBASIC3.98□□□□□ -1.77
IFT140Q96RY7 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.98□□□□□ -1.77
IFT140Q96RY7 AC245517.2-201ENST00000442890 346 ntBASIC3.98□□□□□ -1.77
IFT140Q96RY7 AC126182.1-201ENST00000478134 357 ntBASIC3.98□□□□□ -1.77
IFT140Q96RY7 DYNLL1P6-201ENST00000503440 264 ntBASIC3.98□□□□□ -1.77
IFT140Q96RY7 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.98□□□□□ -1.77
IFT140Q96RY7 OR4A45P-201ENST00000529954 901 ntBASIC3.98□□□□□ -1.77
IFT140Q96RY7 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.98□□□□□ -1.77
IFT140Q96RY7 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
IFT140Q96RY7 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.98□□□□□ -1.77
IFT140Q96RY7 RNU1-91P-201ENST00000364746 163 ntBASIC3.98□□□□□ -1.77
IFT140Q96RY7 RPL23AP36-201ENST00000413895 458 ntBASIC3.98□□□□□ -1.77
IFT140Q96RY7 AC117522.2-201ENST00000510049 657 ntBASIC3.98□□□□□ -1.77
IFT140Q96RY7 TXNP6-201ENST00000510190 310 ntBASIC3.98□□□□□ -1.77
IFT140Q96RY7 AC068657.1-201ENST00000520807 306 ntBASIC3.98□□□□□ -1.77
IFT140Q96RY7 BMS1P7-201ENST00000602440 1052 ntBASIC3.98□□□□□ -1.77
IFT140Q96RY7 TP73-AS1.1-201ENST00000611447 161 ntBASIC3.98□□□□□ -1.77
IFT140Q96RY7 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC3.97□□□□□ -1.77
IFT140Q96RY7 AC069528.2-201ENST00000624849 1991 ntBASIC3.97□□□□□ -1.77
IFT140Q96RY7 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.97□□□□□ -1.77
IFT140Q96RY7 AL133412.1-201ENST00000380194 2992 ntBASIC3.97□□□□□ -1.77
IFT140Q96RY7 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
IFT140Q96RY7 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
IFT140Q96RY7 RNA5SP88-201ENST00000365560 109 ntBASIC3.97□□□□□ -1.77
IFT140Q96RY7 RPL21P3-201ENST00000395517 478 ntBASIC3.97□□□□□ -1.77
IFT140Q96RY7 AL355379.1-201ENST00000405542 640 ntBASIC3.97□□□□□ -1.77
IFT140Q96RY7 AC010881.1-201ENST00000433830 235 ntBASIC3.97□□□□□ -1.77
IFT140Q96RY7 AC146507.2-201ENST00000460608 476 ntBASIC3.97□□□□□ -1.77
IFT140Q96RY7 RPL21P71-201ENST00000465598 459 ntBASIC3.97□□□□□ -1.77
IFT140Q96RY7 AC026436.1-201ENST00000510537 270 ntBASIC3.97□□□□□ -1.77
IFT140Q96RY7 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.97□□□□□ -1.77
IFT140Q96RY7 CBX3P5-201ENST00000552017 521 ntBASIC3.97□□□□□ -1.77
IFT140Q96RY7 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.97□□□□□ -1.77
IFT140Q96RY7 AC122134.1-201ENST00000565664 1104 ntBASIC3.97□□□□□ -1.77
IFT140Q96RY7 MIR5007-201ENST00000583098 95 ntBASIC3.97□□□□□ -1.77
IFT140Q96RY7 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
IFT140Q96RY7 MIR7153-201ENST00000637758 57 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms