Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 AC007684.1-201ENST00000609671 477 ntBASIC3.22□□□□□ -1.89
LINC00479Q96M42 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC3.22□□□□□ -1.89
LINC00479Q96M42 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.22□□□□□ -1.89
LINC00479Q96M42 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.22□□□□□ -1.89
LINC00479Q96M42 MIR7702-201ENST00000621931 59 ntBASIC3.22□□□□□ -1.89
LINC00479Q96M42 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.22□□□□□ -1.89
LINC00479Q96M42 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LINC00479Q96M42 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.22□□□□□ -1.89
LINC00479Q96M42 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.22□□□□□ -1.89
LINC00479Q96M42 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
LINC00479Q96M42 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.22□□□□□ -1.89
LINC00479Q96M42 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.22□□□□□ -1.89
LINC00479Q96M42 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
LINC00479Q96M42 XPOTP1-201ENST00000443317 2398 ntBASIC3.22□□□□□ -1.89
LINC00479Q96M42 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
LINC00479Q96M42 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.89
LINC00479Q96M42 AC090971.4-201ENST00000560291 1800 ntBASIC3.21□□□□□ -1.89
LINC00479Q96M42 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
LINC00479Q96M42 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC3.21□□□□□ -1.9
LINC00479Q96M42 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.9
LINC00479Q96M42 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
LINC00479Q96M42 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
LINC00479Q96M42 MTND5P26-201ENST00000426018 1752 ntBASIC3.21□□□□□ -1.9
LINC00479Q96M42 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
LINC00479Q96M42 OR11H4-201ENST00000315409 1082 ntBASIC3.21□□□□□ -1.9
LINC00479Q96M42 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.21□□□□□ -1.9
LINC00479Q96M42 RNA5SP175-201ENST00000364275 119 ntBASIC3.21□□□□□ -1.9
LINC00479Q96M42 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.21□□□□□ -1.9
LINC00479Q96M42 RNU6-809P-201ENST00000384461 107 ntBASIC3.21□□□□□ -1.9
LINC00479Q96M42 Y_RNA.554-201ENST00000384672 102 ntBASIC3.21□□□□□ -1.9
LINC00479Q96M42 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
LINC00479Q96M42 AL645927.1-201ENST00000396783 406 ntBASIC3.21□□□□□ -1.9
LINC00479Q96M42 RPS3AP23-201ENST00000401762 784 ntBASIC3.21□□□□□ -1.9
LINC00479Q96M42 MIR320C1-201ENST00000408566 88 ntBASIC3.21□□□□□ -1.9
LINC00479Q96M42 RNU2-50P-201ENST00000410494 143 ntBASIC3.21□□□□□ -1.9
LINC00479Q96M42 RN7SKP56-201ENST00000410513 331 ntBASIC3.21□□□□□ -1.9
LINC00479Q96M42 HMGN1P14-201ENST00000412459 517 ntBASIC3.21□□□□□ -1.9
LINC00479Q96M42 TPMTP2-201ENST00000414372 726 ntBASIC3.21□□□□□ -1.9
LINC00479Q96M42 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.21□□□□□ -1.9
LINC00479Q96M42 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.21□□□□□ -1.9
LINC00479Q96M42 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.21□□□□□ -1.9
LINC00479Q96M42 RPL21P32-201ENST00000419877 477 ntBASIC3.21□□□□□ -1.9
LINC00479Q96M42 OR8F1P-201ENST00000425243 930 ntBASIC3.21□□□□□ -1.9
LINC00479Q96M42 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LINC00479Q96M42 BRWD1P3-201ENST00000428816 390 ntBASIC3.21□□□□□ -1.9
LINC00479Q96M42 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.21□□□□□ -1.9
LINC00479Q96M42 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.21□□□□□ -1.9
LINC00479Q96M42 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.21□□□□□ -1.9
LINC00479Q96M42 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.21□□□□□ -1.9
LINC00479Q96M42 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.21□□□□□ -1.9
LINC00479Q96M42 AL772161.1-201ENST00000439130 476 ntBASIC3.21□□□□□ -1.9
LINC00479Q96M42 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC3.21□□□□□ -1.9
LINC00479Q96M42 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.21□□□□□ -1.9
LINC00479Q96M42 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.21□□□□□ -1.9
LINC00479Q96M42 FABP3P2-201ENST00000453169 399 ntBASIC3.21□□□□□ -1.9
LINC00479Q96M42 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.21□□□□□ -1.9
LINC00479Q96M42 BX322784.1-201ENST00000455793 1077 ntBASIC3.21□□□□□ -1.9
LINC00479Q96M42 MTCO1P42-201ENST00000457379 726 ntBASIC3.21□□□□□ -1.9
LINC00479Q96M42 KLF3P2-201ENST00000465138 268 ntBASIC3.21□□□□□ -1.9
LINC00479Q96M42 RN7SL329P-201ENST00000467740 299 ntBASIC3.21□□□□□ -1.9
LINC00479Q96M42 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC3.21□□□□□ -1.9
LINC00479Q96M42 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.21□□□□□ -1.9
LINC00479Q96M42 POU5F1P7-201ENST00000508759 541 ntBASIC3.21□□□□□ -1.9
LINC00479Q96M42 NDUFB4P2-201ENST00000509515 391 ntBASIC3.21□□□□□ -1.9
LINC00479Q96M42 AC034159.1-201ENST00000513885 583 ntBASIC3.21□□□□□ -1.9
LINC00479Q96M42 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LINC00479Q96M42 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
LINC00479Q96M42 IGKV2-38-201ENST00000517443 247 ntBASIC3.21□□□□□ -1.9
LINC00479Q96M42 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.21□□□□□ -1.9
LINC00479Q96M42 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC3.21□□□□□ -1.9
LINC00479Q96M42 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC3.21□□□□□ -1.9
LINC00479Q96M42 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LINC00479Q96M42 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LINC00479Q96M42 AP002453.2-201ENST00000533503 320 ntBASIC3.21□□□□□ -1.9
LINC00479Q96M42 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.21□□□□□ -1.9
LINC00479Q96M42 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.21□□□□□ -1.9
LINC00479Q96M42 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.21□□□□□ -1.9
LINC00479Q96M42 HSPE1P3-201ENST00000559254 309 ntBASIC3.21□□□□□ -1.9
LINC00479Q96M42 AC084757.1-201ENST00000559987 490 ntBASIC3.21□□□□□ -1.9
LINC00479Q96M42 MIR4644-201ENST00000579929 84 ntBASIC3.21□□□□□ -1.9
LINC00479Q96M42 NF1P5-201ENST00000588287 448 ntBASIC3.21□□□□□ -1.9
LINC00479Q96M42 AC005191.1-201ENST00000603950 358 ntBASIC3.21□□□□□ -1.9
LINC00479Q96M42 AC090948.2-201ENST00000607363 564 ntBASIC3.21□□□□□ -1.9
LINC00479Q96M42 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.21□□□□□ -1.9
LINC00479Q96M42 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.21□□□□□ -1.9
LINC00479Q96M42 AC123768.4-201ENST00000616244 701 ntBASIC3.21□□□□□ -1.9
LINC00479Q96M42 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.21□□□□□ -1.9
LINC00479Q96M42 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.21□□□□□ -1.9
LINC00479Q96M42 SEPT14P19-203ENST00000633205 211 ntBASIC3.21□□□□□ -1.9
LINC00479Q96M42 AC099654.12-201ENST00000639868 649 ntBASIC3.21□□□□□ -1.9
LINC00479Q96M42 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
LINC00479Q96M42 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.21□□□□□ -1.9
LINC00479Q96M42 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
LINC00479Q96M42 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
LINC00479Q96M42 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.21□□□□□ -1.9
LINC00479Q96M42 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.21□□□□□ -1.9
LINC00479Q96M42 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
LINC00479Q96M42 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.21□□□□□ -1.9
LINC00479Q96M42 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.21□□□□□ -1.9
LINC00479Q96M42 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms