Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.8□□□□□ -1.8
USP47Q96K76 AC109315.1-201ENST00000584143 1347 ntBASIC3.8□□□□□ -1.8
USP47Q96K76 AL049780.3-201ENST00000624612 1583 ntBASIC3.8□□□□□ -1.8
USP47Q96K76 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
USP47Q96K76 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.79□□□□□ -1.8
USP47Q96K76 MIR34A-201ENST00000385130 110 ntBASIC3.79□□□□□ -1.8
USP47Q96K76 Z86062.1-201ENST00000406773 777 ntBASIC3.79□□□□□ -1.8
USP47Q96K76 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.79□□□□□ -1.8
USP47Q96K76 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.79□□□□□ -1.8
USP47Q96K76 MTND2P21-201ENST00000436242 1042 ntBASIC3.79□□□□□ -1.8
USP47Q96K76 AL662791.1-201ENST00000441992 928 ntBASIC3.79□□□□□ -1.8
USP47Q96K76 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.79□□□□□ -1.8
USP47Q96K76 AL590399.6-201ENST00000446396 307 ntBASIC3.79□□□□□ -1.8
USP47Q96K76 MRPL50P4-201ENST00000446432 475 ntBASIC3.79□□□□□ -1.8
USP47Q96K76 TRBV12-1-201ENST00000479785 344 ntBASIC3.79□□□□□ -1.8
USP47Q96K76 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.79□□□□□ -1.8
USP47Q96K76 AC108157.1-201ENST00000510511 539 ntBASIC3.79□□□□□ -1.8
USP47Q96K76 RPL7L1P13-201ENST00000511702 739 ntBASIC3.79□□□□□ -1.8
USP47Q96K76 RNU6-751P-201ENST00000516382 101 ntBASIC3.79□□□□□ -1.8
USP47Q96K76 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.79□□□□□ -1.8
USP47Q96K76 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.79□□□□□ -1.8
USP47Q96K76 SUMO2P14-201ENST00000604488 293 ntBASIC3.79□□□□□ -1.8
USP47Q96K76 AC026790.2-201ENST00000606282 430 ntBASIC3.79□□□□□ -1.8
USP47Q96K76 AC110792.4-201ENST00000609843 298 ntBASIC3.79□□□□□ -1.8
USP47Q96K76 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
USP47Q96K76 AC095050.2-201ENST00000510748 1458 ntBASIC3.79□□□□□ -1.8
USP47Q96K76 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
USP47Q96K76 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
USP47Q96K76 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.79□□□□□ -1.8
USP47Q96K76 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
USP47Q96K76 MIR196B-201ENST00000384852 84 ntBASIC3.78□□□□□ -1.8
USP47Q96K76 RNU2-52P-201ENST00000410680 190 ntBASIC3.78□□□□□ -1.8
USP47Q96K76 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.78□□□□□ -1.8
USP47Q96K76 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.78□□□□□ -1.8
USP47Q96K76 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.78□□□□□ -1.8
USP47Q96K76 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.78□□□□□ -1.8
USP47Q96K76 HGF-207ENST00000453018 721 ntTSL 3 BASIC3.78□□□□□ -1.8
USP47Q96K76 CACYBPP2-201ENST00000453625 678 ntBASIC3.78□□□□□ -1.8
USP47Q96K76 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.78□□□□□ -1.8
USP47Q96K76 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.78□□□□□ -1.8
USP47Q96K76 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
USP47Q96K76 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
USP47Q96K76 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.78□□□□□ -1.8
USP47Q96K76 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
USP47Q96K76 OR4C2P-201ENST00000530855 1064 ntBASIC3.78□□□□□ -1.8
USP47Q96K76 AP002812.4-201ENST00000532139 286 ntBASIC3.78□□□□□ -1.8
USP47Q96K76 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.78□□□□□ -1.8
USP47Q96K76 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.78□□□□□ -1.8
USP47Q96K76 AL161713.1-201ENST00000555538 145 ntBASIC3.78□□□□□ -1.8
USP47Q96K76 AC067805.1-201ENST00000559344 470 ntBASIC3.78□□□□□ -1.8
USP47Q96K76 AC012414.2-201ENST00000559474 187 ntBASIC3.78□□□□□ -1.8
USP47Q96K76 AC009097.3-201ENST00000563557 1018 ntBASIC3.78□□□□□ -1.8
USP47Q96K76 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.78□□□□□ -1.8
USP47Q96K76 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.78□□□□□ -1.8
USP47Q96K76 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.78□□□□□ -1.8
USP47Q96K76 ZNF826P-207ENST00000622273 1910 ntBASIC3.78□□□□□ -1.8
USP47Q96K76 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
USP47Q96K76 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
USP47Q96K76 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
USP47Q96K76 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
USP47Q96K76 U3.12-201ENST00000364498 214 ntBASIC3.77□□□□□ -1.81
USP47Q96K76 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.77□□□□□ -1.81
USP47Q96K76 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
USP47Q96K76 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.77□□□□□ -1.81
USP47Q96K76 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.77□□□□□ -1.81
USP47Q96K76 NECAP1P2-201ENST00000455668 727 ntBASIC3.77□□□□□ -1.81
USP47Q96K76 RNU7-170P-201ENST00000459303 61 ntBASIC3.77□□□□□ -1.81
USP47Q96K76 RPL30P11-201ENST00000495304 339 ntBASIC3.77□□□□□ -1.81
USP47Q96K76 SSR3-208ENST00000496050 579 ntTSL 4 BASIC3.77□□□□□ -1.81
USP47Q96K76 MTATP6P22-201ENST00000507369 598 ntBASIC3.77□□□□□ -1.81
USP47Q96K76 AC104763.2-201ENST00000604179 382 ntBASIC3.77□□□□□ -1.81
USP47Q96K76 AC242628.1-201ENST00000606810 391 ntBASIC3.77□□□□□ -1.81
USP47Q96K76 AC107871.2-201ENST00000612894 502 ntBASIC3.77□□□□□ -1.81
USP47Q96K76 AC016911.1-201ENST00000613297 452 ntBASIC3.77□□□□□ -1.81
USP47Q96K76 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
USP47Q96K76 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
USP47Q96K76 ZNF542P-204ENST00000482727 1305 ntBASIC3.77□□□□□ -1.81
USP47Q96K76 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
USP47Q96K76 SNORA51.4-201ENST00000364993 124 ntBASIC3.76□□□□□ -1.81
USP47Q96K76 RSL24D1P4-201ENST00000400938 484 ntBASIC3.76□□□□□ -1.81
USP47Q96K76 AL590290.1-201ENST00000405336 380 ntBASIC3.76□□□□□ -1.81
USP47Q96K76 YPEL5P1-201ENST00000419731 367 ntBASIC3.76□□□□□ -1.81
USP47Q96K76 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.76□□□□□ -1.81
USP47Q96K76 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.76□□□□□ -1.81
USP47Q96K76 RPL21P18-201ENST00000469899 480 ntBASIC3.76□□□□□ -1.81
USP47Q96K76 AC092045.1-201ENST00000495716 1231 ntBASIC3.76□□□□□ -1.81
USP47Q96K76 AC025459.1-201ENST00000504072 156 ntBASIC3.76□□□□□ -1.81
USP47Q96K76 YWHAEP4-201ENST00000505390 198 ntBASIC3.76□□□□□ -1.81
USP47Q96K76 RNU4-29P-201ENST00000515943 174 ntBASIC3.76□□□□□ -1.81
USP47Q96K76 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.76□□□□□ -1.81
USP47Q96K76 IGKV2-36-201ENST00000519999 223 ntBASIC3.76□□□□□ -1.81
USP47Q96K76 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.76□□□□□ -1.81
USP47Q96K76 MIR4635-201ENST00000583759 79 ntBASIC3.76□□□□□ -1.81
USP47Q96K76 AC008277.2-201ENST00000605196 797 ntBASIC3.76□□□□□ -1.81
USP47Q96K76 AC087241.4-201ENST00000612441 480 ntBASIC3.76□□□□□ -1.81
USP47Q96K76 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.76□□□□□ -1.81
USP47Q96K76 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
USP47Q96K76 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
USP47Q96K76 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.76□□□□□ -1.81
USP47Q96K76 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms