Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AC087879.1-201ENST00000474343 374 ntBASIC3.18□□□□□ -1.9
ECHDC3Q96DC8 RPS3AP43-201ENST00000479743 781 ntBASIC3.18□□□□□ -1.9
ECHDC3Q96DC8 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.18□□□□□ -1.9
ECHDC3Q96DC8 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.18□□□□□ -1.9
ECHDC3Q96DC8 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.18□□□□□ -1.9
ECHDC3Q96DC8 AP004371.1-201ENST00000525240 214 ntBASIC3.18□□□□□ -1.9
ECHDC3Q96DC8 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.18□□□□□ -1.9
ECHDC3Q96DC8 AC109635.4-202ENST00000531666 412 ntBASIC3.18□□□□□ -1.9
ECHDC3Q96DC8 LINC00557-201ENST00000563184 1279 ntBASIC3.18□□□□□ -1.9
ECHDC3Q96DC8 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.18□□□□□ -1.9
ECHDC3Q96DC8 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.18□□□□□ -1.9
ECHDC3Q96DC8 AC005951.1-201ENST00000576706 485 ntBASIC3.18□□□□□ -1.9
ECHDC3Q96DC8 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.18□□□□□ -1.9
ECHDC3Q96DC8 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC3.18□□□□□ -1.9
ECHDC3Q96DC8 ZNF92P2-201ENST00000600543 1059 ntBASIC3.18□□□□□ -1.9
ECHDC3Q96DC8 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.18□□□□□ -1.9
ECHDC3Q96DC8 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.18□□□□□ -1.9
ECHDC3Q96DC8 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
ECHDC3Q96DC8 AP006248.3-201ENST00000623580 594 ntBASIC3.18□□□□□ -1.9
ECHDC3Q96DC8 MIR622-201ENST00000638396 96 ntBASIC3.18□□□□□ -1.9
ECHDC3Q96DC8 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.18□□□□□ -1.9
ECHDC3Q96DC8 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.18□□□□□ -1.9
ECHDC3Q96DC8 SRP72P2-201ENST00000344851 1979 ntBASIC3.18□□□□□ -1.9
ECHDC3Q96DC8 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
ECHDC3Q96DC8 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
ECHDC3Q96DC8 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ECHDC3Q96DC8 MTCO1P6-201ENST00000481192 1384 ntBASIC3.17□□□□□ -1.9
ECHDC3Q96DC8 RNU6-761P-201ENST00000384148 107 ntBASIC3.17□□□□□ -1.9
ECHDC3Q96DC8 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.17□□□□□ -1.9
ECHDC3Q96DC8 ATF1P1-201ENST00000406040 927 ntBASIC3.17□□□□□ -1.9
ECHDC3Q96DC8 SNORA11.1-201ENST00000408133 129 ntBASIC3.17□□□□□ -1.9
ECHDC3Q96DC8 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.17□□□□□ -1.9
ECHDC3Q96DC8 AC073264.1-201ENST00000411508 416 ntBASIC3.17□□□□□ -1.9
ECHDC3Q96DC8 AC007899.1-201ENST00000412776 775 ntBASIC3.17□□□□□ -1.9
ECHDC3Q96DC8 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.17□□□□□ -1.9
ECHDC3Q96DC8 PAICSP7-201ENST00000419829 962 ntBASIC3.17□□□□□ -1.9
ECHDC3Q96DC8 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.17□□□□□ -1.9
ECHDC3Q96DC8 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.17□□□□□ -1.9
ECHDC3Q96DC8 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.17□□□□□ -1.9
ECHDC3Q96DC8 PTP4A1P3-201ENST00000433661 420 ntBASIC3.17□□□□□ -1.9
ECHDC3Q96DC8 HMGN2P20-201ENST00000437531 273 ntBASIC3.17□□□□□ -1.9
ECHDC3Q96DC8 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.17□□□□□ -1.9
ECHDC3Q96DC8 RPL7P59-201ENST00000447700 943 ntBASIC3.17□□□□□ -1.9
ECHDC3Q96DC8 SSXP4-201ENST00000451349 245 ntBASIC3.17□□□□□ -1.9
ECHDC3Q96DC8 snoU13.3-201ENST00000459441 104 ntBASIC3.17□□□□□ -1.9
ECHDC3Q96DC8 AC006445.1-201ENST00000491925 405 ntBASIC3.17□□□□□ -1.9
ECHDC3Q96DC8 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.17□□□□□ -1.9
ECHDC3Q96DC8 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.17□□□□□ -1.9
ECHDC3Q96DC8 RNU6-488P-201ENST00000515918 99 ntBASIC3.17□□□□□ -1.9
ECHDC3Q96DC8 RNU6-1102P-201ENST00000516149 96 ntBASIC3.17□□□□□ -1.9
ECHDC3Q96DC8 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.17□□□□□ -1.9
ECHDC3Q96DC8 SNORA70.24-201ENST00000517233 118 ntBASIC3.17□□□□□ -1.9
ECHDC3Q96DC8 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.17□□□□□ -1.9
ECHDC3Q96DC8 AC104027.1-201ENST00000521887 300 ntBASIC3.17□□□□□ -1.9
ECHDC3Q96DC8 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
ECHDC3Q96DC8 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
ECHDC3Q96DC8 CR383656.14-201ENST00000551951 406 ntBASIC3.17□□□□□ -1.9
ECHDC3Q96DC8 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.17□□□□□ -1.9
ECHDC3Q96DC8 AC095057.3-201ENST00000567102 1157 ntBASIC3.17□□□□□ -1.9
ECHDC3Q96DC8 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.17□□□□□ -1.9
ECHDC3Q96DC8 AC008507.1-201ENST00000587506 734 ntBASIC3.17□□□□□ -1.9
ECHDC3Q96DC8 BNIP3P4-201ENST00000604946 565 ntBASIC3.17□□□□□ -1.9
ECHDC3Q96DC8 AC105227.2-201ENST00000615075 605 ntBASIC3.17□□□□□ -1.9
ECHDC3Q96DC8 RMST_10.1-201ENST00000616309 154 ntBASIC3.17□□□□□ -1.9
ECHDC3Q96DC8 AC020923.1-201ENST00000624021 917 ntBASIC3.17□□□□□ -1.9
ECHDC3Q96DC8 AC091903.1-201ENST00000624322 454 ntBASIC3.17□□□□□ -1.9
ECHDC3Q96DC8 AL590396.2-201ENST00000636511 1041 ntBASIC3.17□□□□□ -1.9
ECHDC3Q96DC8 AC118273.1-201ENST00000525324 3006 ntBASIC3.17□□□□□ -1.9
ECHDC3Q96DC8 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ECHDC3Q96DC8 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
ECHDC3Q96DC8 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
ECHDC3Q96DC8 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
ECHDC3Q96DC8 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
ECHDC3Q96DC8 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
ECHDC3Q96DC8 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.16□□□□□ -1.9
ECHDC3Q96DC8 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.16□□□□□ -1.9
ECHDC3Q96DC8 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
ECHDC3Q96DC8 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
ECHDC3Q96DC8 OR1S2-201ENST00000302592 978 ntBASIC3.16□□□□□ -1.9
ECHDC3Q96DC8 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.16□□□□□ -1.9
ECHDC3Q96DC8 MIR491-201ENST00000384877 84 ntBASIC3.16□□□□□ -1.9
ECHDC3Q96DC8 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.16□□□□□ -1.9
ECHDC3Q96DC8 AL158050.1-201ENST00000416077 457 ntBASIC3.16□□□□□ -1.9
ECHDC3Q96DC8 AC008280.1-201ENST00000418851 412 ntBASIC3.16□□□□□ -1.9
ECHDC3Q96DC8 OFD1P18Y-201ENST00000420889 959 ntBASIC3.16□□□□□ -1.9
ECHDC3Q96DC8 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.16□□□□□ -1.9
ECHDC3Q96DC8 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.16□□□□□ -1.9
ECHDC3Q96DC8 AC073508.1-201ENST00000428866 656 ntBASIC3.16□□□□□ -1.9
ECHDC3Q96DC8 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.16□□□□□ -1.9
ECHDC3Q96DC8 BTBD7P2-201ENST00000441962 620 ntBASIC3.16□□□□□ -1.9
ECHDC3Q96DC8 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.16□□□□□ -1.9
ECHDC3Q96DC8 RPS15AP1-201ENST00000457423 391 ntBASIC3.16□□□□□ -1.9
ECHDC3Q96DC8 RPL21P47-201ENST00000483696 477 ntBASIC3.16□□□□□ -1.9
ECHDC3Q96DC8 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.16□□□□□ -1.9
ECHDC3Q96DC8 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.16□□□□□ -1.9
ECHDC3Q96DC8 AC010468.3-201ENST00000508225 458 ntBASIC3.16□□□□□ -1.9
ECHDC3Q96DC8 AC104108.1-201ENST00000509930 412 ntBASIC3.16□□□□□ -1.9
ECHDC3Q96DC8 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.16□□□□□ -1.9
ECHDC3Q96DC8 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.16□□□□□ -1.9
ECHDC3Q96DC8 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms