Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 CLMN-206ENST00000556441 452 ntTSL 5 BASIC6.36□□□□□ -1.39
HLA-CQ95604 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.36□□□□□ -1.39
HLA-CQ95604 AL355812.1-201ENST00000603215 216 ntBASIC6.36□□□□□ -1.39
HLA-CQ95604 AC007566.2-201ENST00000603642 413 ntBASIC6.36□□□□□ -1.39
HLA-CQ95604 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.36□□□□□ -1.39
HLA-CQ95604 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HLA-CQ95604 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HLA-CQ95604 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HLA-CQ95604 HSPA8P4-201ENST00000511877 1920 ntBASIC6.36□□□□□ -1.39
HLA-CQ95604 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
HLA-CQ95604 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
HLA-CQ95604 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HLA-CQ95604 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.36□□□□□ -1.39
HLA-CQ95604 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC6.36□□□□□ -1.39
HLA-CQ95604 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HLA-CQ95604 AC093849.1-201ENST00000563631 2209 ntBASIC6.35□□□□□ -1.39
HLA-CQ95604 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HLA-CQ95604 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HLA-CQ95604 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
HLA-CQ95604 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
HLA-CQ95604 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC6.35□□□□□ -1.39
HLA-CQ95604 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC6.35□□□□□ -1.39
HLA-CQ95604 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HLA-CQ95604 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC6.35□□□□□ -1.39
HLA-CQ95604 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HLA-CQ95604 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
HLA-CQ95604 RNY1P16-201ENST00000363063 111 ntBASIC6.35□□□□□ -1.39
HLA-CQ95604 Y_RNA.151-201ENST00000363566 112 ntBASIC6.35□□□□□ -1.39
HLA-CQ95604 Y_RNA.183-201ENST00000363882 113 ntBASIC6.35□□□□□ -1.39
HLA-CQ95604 RNU6-45P-201ENST00000384471 107 ntBASIC6.35□□□□□ -1.39
HLA-CQ95604 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HLA-CQ95604 TRAPPC2P5-201ENST00000426293 308 ntBASIC6.35□□□□□ -1.39
HLA-CQ95604 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC6.35□□□□□ -1.39
HLA-CQ95604 CYCSP51-201ENST00000443545 318 ntBASIC6.35□□□□□ -1.39
HLA-CQ95604 GAPDHP27-201ENST00000447427 1020 ntBASIC6.35□□□□□ -1.39
HLA-CQ95604 LINC01399-202ENST00000458450 244 ntBASIC6.35□□□□□ -1.39
HLA-CQ95604 AC114728.1-201ENST00000488289 483 ntBASIC6.35□□□□□ -1.39
HLA-CQ95604 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC6.35□□□□□ -1.39
HLA-CQ95604 RNU6-352P-201ENST00000516908 107 ntBASIC6.35□□□□□ -1.39
HLA-CQ95604 RNU6-570P-201ENST00000517051 105 ntBASIC6.35□□□□□ -1.39
HLA-CQ95604 AC034114.1-201ENST00000520293 285 ntBASIC6.35□□□□□ -1.39
HLA-CQ95604 MAL2-201ENST00000522112 573 ntTSL 4 BASIC6.35□□□□□ -1.39
HLA-CQ95604 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.35□□□□□ -1.39
HLA-CQ95604 HMGN2P36-201ENST00000529541 409 ntBASIC6.35□□□□□ -1.39
HLA-CQ95604 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
HLA-CQ95604 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.35□□□□□ -1.39
HLA-CQ95604 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.35□□□□□ -1.39
HLA-CQ95604 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC6.35□□□□□ -1.39
HLA-CQ95604 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.35□□□□□ -1.39
HLA-CQ95604 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.35□□□□□ -1.39
HLA-CQ95604 OR1F2P-201ENST00000570470 933 ntBASIC6.35□□□□□ -1.39
HLA-CQ95604 AC130289.1-201ENST00000577321 73 ntBASIC6.35□□□□□ -1.39
HLA-CQ95604 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC6.35□□□□□ -1.39
HLA-CQ95604 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC6.35□□□□□ -1.39
HLA-CQ95604 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC6.35□□□□□ -1.39
HLA-CQ95604 AC104763.2-201ENST00000604179 382 ntBASIC6.35□□□□□ -1.39
HLA-CQ95604 ELOCP5-201ENST00000604924 333 ntBASIC6.35□□□□□ -1.39
HLA-CQ95604 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.35□□□□□ -1.39
HLA-CQ95604 AC068870.2-201ENST00000620635 389 ntBASIC6.35□□□□□ -1.39
HLA-CQ95604 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.35□□□□□ -1.39
HLA-CQ95604 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.35□□□□□ -1.39
HLA-CQ95604 AL161756.3-201ENST00000641216 2071 ntBASIC6.35□□□□□ -1.39
HLA-CQ95604 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
HLA-CQ95604 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.35□□□□□ -1.39
HLA-CQ95604 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HLA-CQ95604 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
HLA-CQ95604 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
HLA-CQ95604 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.34□□□□□ -1.39
HLA-CQ95604 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
HLA-CQ95604 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.34□□□□□ -1.39
HLA-CQ95604 Y_RNA.150-201ENST00000363562 102 ntBASIC6.34□□□□□ -1.39
HLA-CQ95604 RNA5SP500-201ENST00000364486 119 ntBASIC6.34□□□□□ -1.39
HLA-CQ95604 RNU6-338P-201ENST00000383888 105 ntBASIC6.34□□□□□ -1.39
HLA-CQ95604 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
HLA-CQ95604 NME1P1-201ENST00000420914 382 ntBASIC6.34□□□□□ -1.39
HLA-CQ95604 RPS12P5-201ENST00000423449 371 ntBASIC6.34□□□□□ -1.39
HLA-CQ95604 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.34□□□□□ -1.39
HLA-CQ95604 AL590762.4-201ENST00000425885 253 ntBASIC6.34□□□□□ -1.39
HLA-CQ95604 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC6.34□□□□□ -1.39
HLA-CQ95604 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.34□□□□□ -1.39
HLA-CQ95604 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.34□□□□□ -1.39
HLA-CQ95604 RPS3AP46-201ENST00000448352 682 ntBASIC6.34□□□□□ -1.39
HLA-CQ95604 RN7SL172P-201ENST00000460535 303 ntBASIC6.34□□□□□ -1.39
HLA-CQ95604 AP000942.1-201ENST00000463969 747 ntBASIC6.34□□□□□ -1.39
HLA-CQ95604 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC6.34□□□□□ -1.39
HLA-CQ95604 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.34□□□□□ -1.39
HLA-CQ95604 snoU109.6-201ENST00000516831 118 ntBASIC6.34□□□□□ -1.39
HLA-CQ95604 Y_RNA.703-201ENST00000516846 111 ntBASIC6.34□□□□□ -1.39
HLA-CQ95604 AC109329.1-201ENST00000518744 317 ntBASIC6.34□□□□□ -1.39
HLA-CQ95604 ERHP1-201ENST00000523006 310 ntBASIC6.34□□□□□ -1.39
HLA-CQ95604 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6.34□□□□□ -1.39
HLA-CQ95604 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.34□□□□□ -1.39
HLA-CQ95604 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.34□□□□□ -1.39
HLA-CQ95604 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC6.34□□□□□ -1.39
HLA-CQ95604 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.34□□□□□ -1.39
HLA-CQ95604 AL355877.2-201ENST00000603670 358 ntBASIC6.34□□□□□ -1.39
HLA-CQ95604 AC006363.1-201ENST00000603806 463 ntBASIC6.34□□□□□ -1.39
HLA-CQ95604 AC034229.6-201ENST00000623704 224 ntBASIC6.34□□□□□ -1.39
HLA-CQ95604 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC6.34□□□□□ -1.39
HLA-CQ95604 AC132825.6-201ENST00000638861 357 ntBASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms