Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AL021368.1-201ENST00000607490 540 ntBASIC2.81□□□□□ -1.96
SHROOM3Q8TF72 AC017076.1-201ENST00000607613 578 ntBASIC2.81□□□□□ -1.96
SHROOM3Q8TF72 AC003001.2-201ENST00000616294 831 ntBASIC2.81□□□□□ -1.96
SHROOM3Q8TF72 RMST_5.1-201ENST00000618704 126 ntBASIC2.81□□□□□ -1.96
SHROOM3Q8TF72 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.81□□□□□ -1.96
SHROOM3Q8TF72 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SHROOM3Q8TF72 AC087565.3-202ENST00000642085 1603 ntBASIC2.81□□□□□ -1.96
SHROOM3Q8TF72 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
SHROOM3Q8TF72 MTND5P27-201ENST00000428871 1720 ntBASIC2.81□□□□□ -1.96
SHROOM3Q8TF72 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SHROOM3Q8TF72 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
SHROOM3Q8TF72 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
SHROOM3Q8TF72 RN7SKP192-201ENST00000411291 327 ntBASIC2.8□□□□□ -1.96
SHROOM3Q8TF72 ST13P20-201ENST00000447996 1065 ntBASIC2.8□□□□□ -1.96
SHROOM3Q8TF72 RN7SL297P-201ENST00000483161 293 ntBASIC2.8□□□□□ -1.96
SHROOM3Q8TF72 AC007954.1-201ENST00000554198 494 ntBASIC2.8□□□□□ -1.96
SHROOM3Q8TF72 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.8□□□□□ -1.96
SHROOM3Q8TF72 AC007620.3-201ENST00000608131 497 ntBASIC2.8□□□□□ -1.96
SHROOM3Q8TF72 AC025016.1-201ENST00000616746 682 ntBASIC2.8□□□□□ -1.96
SHROOM3Q8TF72 AC104820.1-201ENST00000624183 307 ntBASIC2.8□□□□□ -1.96
SHROOM3Q8TF72 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC2.8□□□□□ -1.96
SHROOM3Q8TF72 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SHROOM3Q8TF72 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SHROOM3Q8TF72 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
SHROOM3Q8TF72 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SHROOM3Q8TF72 MIR181A2-201ENST00000384863 110 ntBASIC2.8□□□□□ -1.96
SHROOM3Q8TF72 AL138827.1-201ENST00000402666 306 ntBASIC2.8□□□□□ -1.96
SHROOM3Q8TF72 FTH1P6-201ENST00000430768 320 ntBASIC2.8□□□□□ -1.96
SHROOM3Q8TF72 SNRPFP2-201ENST00000440710 251 ntBASIC2.8□□□□□ -1.96
SHROOM3Q8TF72 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.8□□□□□ -1.96
SHROOM3Q8TF72 AL590639.1-201ENST00000456484 337 ntBASIC2.8□□□□□ -1.96
SHROOM3Q8TF72 AC092045.1-201ENST00000495716 1231 ntBASIC2.8□□□□□ -1.96
SHROOM3Q8TF72 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SHROOM3Q8TF72 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC2.8□□□□□ -1.96
SHROOM3Q8TF72 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.8□□□□□ -1.96
SHROOM3Q8TF72 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
SHROOM3Q8TF72 COL6A4P2-205ENST00000509855 506 ntBASIC2.8□□□□□ -1.96
SHROOM3Q8TF72 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC2.8□□□□□ -1.96
SHROOM3Q8TF72 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.8□□□□□ -1.96
SHROOM3Q8TF72 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC2.8□□□□□ -1.96
SHROOM3Q8TF72 VTA1P2-201ENST00000520205 911 ntBASIC2.8□□□□□ -1.96
SHROOM3Q8TF72 AC243972.3-201ENST00000539655 198 ntBASIC2.8□□□□□ -1.96
SHROOM3Q8TF72 CBX3P5-201ENST00000552017 521 ntBASIC2.8□□□□□ -1.96
SHROOM3Q8TF72 TRAV37-201ENST00000553906 342 ntBASIC2.8□□□□□ -1.96
SHROOM3Q8TF72 AC027176.1-201ENST00000560204 514 ntBASIC2.8□□□□□ -1.96
SHROOM3Q8TF72 MTND2P13-201ENST00000577438 1039 ntBASIC2.8□□□□□ -1.96
SHROOM3Q8TF72 AL159169.2-201ENST00000610061 1269 ntBASIC2.8□□□□□ -1.96
SHROOM3Q8TF72 AC004241.3-201ENST00000611728 517 ntBASIC2.8□□□□□ -1.96
SHROOM3Q8TF72 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
SHROOM3Q8TF72 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC2.79□□□□□ -1.96
SHROOM3Q8TF72 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC2.79□□□□□ -1.96
SHROOM3Q8TF72 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.79□□□□□ -1.96
SHROOM3Q8TF72 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
SHROOM3Q8TF72 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SHROOM3Q8TF72 AL589655.1-201ENST00000405398 482 ntBASIC2.79□□□□□ -1.96
SHROOM3Q8TF72 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.79□□□□□ -1.96
SHROOM3Q8TF72 AL451074.5-201ENST00000415894 435 ntBASIC2.79□□□□□ -1.96
SHROOM3Q8TF72 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC2.79□□□□□ -1.96
SHROOM3Q8TF72 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC2.79□□□□□ -1.96
SHROOM3Q8TF72 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC2.79□□□□□ -1.96
SHROOM3Q8TF72 AL603825.1-201ENST00000438481 80 ntBASIC2.79□□□□□ -1.96
SHROOM3Q8TF72 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.79□□□□□ -1.96
SHROOM3Q8TF72 RPL31P20-201ENST00000449593 360 ntBASIC2.79□□□□□ -1.96
SHROOM3Q8TF72 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.79□□□□□ -1.96
SHROOM3Q8TF72 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.79□□□□□ -1.96
SHROOM3Q8TF72 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC2.79□□□□□ -1.96
SHROOM3Q8TF72 RNU4-29P-201ENST00000515943 174 ntBASIC2.79□□□□□ -1.96
SHROOM3Q8TF72 AC104997.1-201ENST00000519761 717 ntBASIC2.79□□□□□ -1.96
SHROOM3Q8TF72 AC079089.3-201ENST00000603094 673 ntBASIC2.79□□□□□ -1.96
SHROOM3Q8TF72 EXOC5P1-201ENST00000510543 1969 ntBASIC2.79□□□□□ -1.96
SHROOM3Q8TF72 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.79□□□□□ -1.96
SHROOM3Q8TF72 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SHROOM3Q8TF72 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SHROOM3Q8TF72 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.79□□□□□ -1.96
SHROOM3Q8TF72 RNU6-178P-201ENST00000384631 104 ntBASIC2.78□□□□□ -1.96
SHROOM3Q8TF72 RNA5SP105-201ENST00000391123 113 ntBASIC2.78□□□□□ -1.96
SHROOM3Q8TF72 AL512633.1-201ENST00000399931 655 ntBASIC2.78□□□□□ -1.96
SHROOM3Q8TF72 GSTA12P-201ENST00000402398 508 ntBASIC2.78□□□□□ -1.96
SHROOM3Q8TF72 AL356057.3-201ENST00000402607 340 ntBASIC2.78□□□□□ -1.96
SHROOM3Q8TF72 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.78□□□□□ -1.96
SHROOM3Q8TF72 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC2.78□□□□□ -1.96
SHROOM3Q8TF72 AL121882.1-201ENST00000422893 417 ntBASIC2.78□□□□□ -1.96
SHROOM3Q8TF72 AC233981.1-201ENST00000423224 461 ntBASIC2.78□□□□□ -1.96
SHROOM3Q8TF72 MTND4P24-201ENST00000424002 397 ntBASIC2.78□□□□□ -1.96
SHROOM3Q8TF72 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
SHROOM3Q8TF72 IFNA11P-201ENST00000446352 526 ntBASIC2.78□□□□□ -1.96
SHROOM3Q8TF72 EIF2S2P4-201ENST00000461070 984 ntBASIC2.78□□□□□ -1.96
SHROOM3Q8TF72 RPL21P71-201ENST00000465598 459 ntBASIC2.78□□□□□ -1.96
SHROOM3Q8TF72 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.78□□□□□ -1.96
SHROOM3Q8TF72 OR52A4P-202ENST00000481634 799 ntBASIC2.78□□□□□ -1.96
SHROOM3Q8TF72 AC111000.2-201ENST00000507775 550 ntBASIC2.78□□□□□ -1.96
SHROOM3Q8TF72 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC2.78□□□□□ -1.96
SHROOM3Q8TF72 ELOCP31-201ENST00000540463 467 ntBASIC2.78□□□□□ -1.96
SHROOM3Q8TF72 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.78□□□□□ -1.96
SHROOM3Q8TF72 ZNF861P-201ENST00000588126 639 ntBASIC2.78□□□□□ -1.96
SHROOM3Q8TF72 AP004372.1-201ENST00000604842 844 ntBASIC2.78□□□□□ -1.96
SHROOM3Q8TF72 RPL21P136-201ENST00000605378 396 ntBASIC2.78□□□□□ -1.96
SHROOM3Q8TF72 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SHROOM3Q8TF72 AC009501.3-201ENST00000605001 1352 ntBASIC2.78□□□□□ -1.96
SHROOM3Q8TF72 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 155.2 ms