Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC5.29□□□□□ -1.56
SMC1BQ8NDV3 OFD1P18Y-201ENST00000420889 959 ntBASIC5.29□□□□□ -1.56
SMC1BQ8NDV3 MTCO1P27-201ENST00000448269 226 ntBASIC5.29□□□□□ -1.56
SMC1BQ8NDV3 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SMC1BQ8NDV3 EIF4A1P11-201ENST00000451239 222 ntBASIC5.29□□□□□ -1.56
SMC1BQ8NDV3 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC5.29□□□□□ -1.56
SMC1BQ8NDV3 AC104057.1-201ENST00000515547 497 ntBASIC5.29□□□□□ -1.56
SMC1BQ8NDV3 RNA5SP49-201ENST00000516450 115 ntBASIC5.29□□□□□ -1.56
SMC1BQ8NDV3 HSPA8P13-201ENST00000523715 472 ntBASIC5.29□□□□□ -1.56
SMC1BQ8NDV3 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC5.29□□□□□ -1.56
SMC1BQ8NDV3 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC5.29□□□□□ -1.56
SMC1BQ8NDV3 MIR4513-201ENST00000581077 86 ntBASIC5.29□□□□□ -1.56
SMC1BQ8NDV3 AC097468.3-201ENST00000607956 456 ntBASIC5.29□□□□□ -1.56
SMC1BQ8NDV3 AC006566.1-201ENST00000608943 513 ntBASIC5.29□□□□□ -1.56
SMC1BQ8NDV3 AL589743.7-201ENST00000612637 233 ntBASIC5.29□□□□□ -1.56
SMC1BQ8NDV3 AL139089.1-201ENST00000620372 975 ntBASIC5.29□□□□□ -1.56
SMC1BQ8NDV3 AL672167.1-204ENST00000641875 3017 ntBASIC5.29□□□□□ -1.56
SMC1BQ8NDV3 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SMC1BQ8NDV3 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
SMC1BQ8NDV3 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.29□□□□□ -1.56
SMC1BQ8NDV3 AC009643.2-201ENST00000603543 1448 ntBASIC5.29□□□□□ -1.56
SMC1BQ8NDV3 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
SMC1BQ8NDV3 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SMC1BQ8NDV3 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.29□□□□□ -1.56
SMC1BQ8NDV3 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SMC1BQ8NDV3 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.28□□□□□ -1.56
SMC1BQ8NDV3 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC5.28□□□□□ -1.56
SMC1BQ8NDV3 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SMC1BQ8NDV3 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
SMC1BQ8NDV3 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SMC1BQ8NDV3 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SMC1BQ8NDV3 RPL23AP57-201ENST00000332361 466 ntBASIC5.28□□□□□ -1.56
SMC1BQ8NDV3 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SMC1BQ8NDV3 Y_RNA.97-201ENST00000363094 102 ntBASIC5.28□□□□□ -1.56
SMC1BQ8NDV3 MIR1305-201ENST00000408300 86 ntBASIC5.28□□□□□ -1.56
SMC1BQ8NDV3 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.28□□□□□ -1.56
SMC1BQ8NDV3 RN7SKP266-201ENST00000410232 287 ntBASIC5.28□□□□□ -1.56
SMC1BQ8NDV3 RNU2-66P-201ENST00000410650 161 ntBASIC5.28□□□□□ -1.56
SMC1BQ8NDV3 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC5.28□□□□□ -1.56
SMC1BQ8NDV3 HMGN1P14-201ENST00000412459 517 ntBASIC5.28□□□□□ -1.56
SMC1BQ8NDV3 FCF1P9-201ENST00000412546 282 ntBASIC5.28□□□□□ -1.56
SMC1BQ8NDV3 NUP35P2-201ENST00000416748 943 ntBASIC5.28□□□□□ -1.56
SMC1BQ8NDV3 AC068533.1-201ENST00000418542 415 ntBASIC5.28□□□□□ -1.56
SMC1BQ8NDV3 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC5.28□□□□□ -1.56
SMC1BQ8NDV3 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC5.28□□□□□ -1.56
SMC1BQ8NDV3 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC5.28□□□□□ -1.56
SMC1BQ8NDV3 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC5.28□□□□□ -1.56
SMC1BQ8NDV3 AC091862.1-201ENST00000438016 1100 ntBASIC5.28□□□□□ -1.56
SMC1BQ8NDV3 LSM1P1-201ENST00000438629 273 ntBASIC5.28□□□□□ -1.56
SMC1BQ8NDV3 RPL7AP61-201ENST00000443410 636 ntBASIC5.28□□□□□ -1.56
SMC1BQ8NDV3 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC5.28□□□□□ -1.56
SMC1BQ8NDV3 snoU13.7-201ENST00000459220 104 ntBASIC5.28□□□□□ -1.56
SMC1BQ8NDV3 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SMC1BQ8NDV3 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
SMC1BQ8NDV3 RPL7P24-201ENST00000493052 752 ntBASIC5.28□□□□□ -1.56
SMC1BQ8NDV3 AC022447.3-201ENST00000506865 495 ntBASIC5.28□□□□□ -1.56
SMC1BQ8NDV3 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC5.28□□□□□ -1.56
SMC1BQ8NDV3 AC024589.1-201ENST00000512207 263 ntBASIC5.28□□□□□ -1.56
SMC1BQ8NDV3 AF131216.2-201ENST00000512316 564 ntBASIC5.28□□□□□ -1.56
SMC1BQ8NDV3 RN7SKP46-201ENST00000515942 234 ntBASIC5.28□□□□□ -1.56
SMC1BQ8NDV3 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC5.28□□□□□ -1.56
SMC1BQ8NDV3 NTS-203ENST00000551529 801 ntTSL 3 BASIC5.28□□□□□ -1.56
SMC1BQ8NDV3 AC108747.1-201ENST00000609508 535 ntBASIC5.28□□□□□ -1.56
SMC1BQ8NDV3 AC092794.1-201ENST00000612734 582 ntBASIC5.28□□□□□ -1.56
SMC1BQ8NDV3 AL357080.1-201ENST00000617394 239 ntBASIC5.28□□□□□ -1.56
SMC1BQ8NDV3 AC015871.5-202ENST00000623252 701 ntBASIC5.28□□□□□ -1.56
SMC1BQ8NDV3 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.28□□□□□ -1.56
SMC1BQ8NDV3 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
SMC1BQ8NDV3 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SMC1BQ8NDV3 AL451142.2-201ENST00000429076 2090 ntBASIC5.28□□□□□ -1.56
SMC1BQ8NDV3 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
SMC1BQ8NDV3 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SMC1BQ8NDV3 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SMC1BQ8NDV3 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
SMC1BQ8NDV3 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SMC1BQ8NDV3 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
SMC1BQ8NDV3 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SMC1BQ8NDV3 MAPK10-286ENST00000641208 8747 ntBASIC5.27□□□□□ -1.57
SMC1BQ8NDV3 AC011978.2-201ENST00000569835 2054 ntBASIC5.27□□□□□ -1.57
SMC1BQ8NDV3 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SMC1BQ8NDV3 SCN1A-220ENST00000641603 12506 ntBASIC5.27□□□□□ -1.57
SMC1BQ8NDV3 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SMC1BQ8NDV3 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SMC1BQ8NDV3 RNU6-348P-201ENST00000384386 107 ntBASIC5.27□□□□□ -1.57
SMC1BQ8NDV3 AC016769.3-201ENST00000396562 315 ntBASIC5.27□□□□□ -1.57
SMC1BQ8NDV3 ARF4P3-201ENST00000397387 509 ntBASIC5.27□□□□□ -1.57
SMC1BQ8NDV3 AL024474.1-201ENST00000404655 591 ntBASIC5.27□□□□□ -1.57
SMC1BQ8NDV3 RNU6ATAC25P-201ENST00000408798 117 ntBASIC5.27□□□□□ -1.57
SMC1BQ8NDV3 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.27□□□□□ -1.57
SMC1BQ8NDV3 B3GALNT1P1-201ENST00000420569 975 ntBASIC5.27□□□□□ -1.57
SMC1BQ8NDV3 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC5.27□□□□□ -1.57
SMC1BQ8NDV3 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.27□□□□□ -1.57
SMC1BQ8NDV3 COX6B1P7-201ENST00000430845 235 ntBASIC5.27□□□□□ -1.57
SMC1BQ8NDV3 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.27□□□□□ -1.57
SMC1BQ8NDV3 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC5.27□□□□□ -1.57
SMC1BQ8NDV3 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.27□□□□□ -1.57
SMC1BQ8NDV3 SKP1P1-201ENST00000438081 489 ntBASIC5.27□□□□□ -1.57
SMC1BQ8NDV3 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC5.27□□□□□ -1.57
SMC1BQ8NDV3 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SMC1BQ8NDV3 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms