Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
USP38Q8NB14 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.47□□□□□ -1.69
USP38Q8NB14 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
USP38Q8NB14 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
USP38Q8NB14 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.47□□□□□ -1.69
USP38Q8NB14 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.47□□□□□ -1.69
USP38Q8NB14 RNU6-621P-201ENST00000364752 109 ntBASIC4.47□□□□□ -1.69
USP38Q8NB14 U3.15-201ENST00000365398 212 ntBASIC4.47□□□□□ -1.69
USP38Q8NB14 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.47□□□□□ -1.69
USP38Q8NB14 RNU6-213P-201ENST00000384051 104 ntBASIC4.47□□□□□ -1.69
USP38Q8NB14 SNORA51.6-201ENST00000384151 125 ntBASIC4.47□□□□□ -1.69
USP38Q8NB14 MIR30B-201ENST00000384850 88 ntBASIC4.47□□□□□ -1.69
USP38Q8NB14 EIF5P1-201ENST00000400019 1231 ntBASIC4.47□□□□□ -1.69
USP38Q8NB14 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
USP38Q8NB14 AC096664.2-201ENST00000411843 406 ntBASIC4.47□□□□□ -1.69
USP38Q8NB14 USP9YP33-201ENST00000412220 421 ntBASIC4.47□□□□□ -1.69
USP38Q8NB14 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC4.47□□□□□ -1.69
USP38Q8NB14 OR5BE1P-201ENST00000425977 939 ntBASIC4.47□□□□□ -1.69
USP38Q8NB14 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC4.47□□□□□ -1.69
USP38Q8NB14 USP9YP35-201ENST00000435696 412 ntBASIC4.47□□□□□ -1.69
USP38Q8NB14 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.47□□□□□ -1.69
USP38Q8NB14 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC4.47□□□□□ -1.69
USP38Q8NB14 RPL39P6-201ENST00000448289 150 ntBASIC4.47□□□□□ -1.69
USP38Q8NB14 NANOGP10-201ENST00000453325 895 ntBASIC4.47□□□□□ -1.69
USP38Q8NB14 RPL18AP17-201ENST00000455326 198 ntBASIC4.47□□□□□ -1.69
USP38Q8NB14 SNRPGP5-201ENST00000456003 220 ntBASIC4.47□□□□□ -1.69
USP38Q8NB14 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.47□□□□□ -1.69
USP38Q8NB14 RPL29P14-201ENST00000495837 428 ntBASIC4.47□□□□□ -1.69
USP38Q8NB14 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.47□□□□□ -1.69
USP38Q8NB14 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC4.47□□□□□ -1.69
USP38Q8NB14 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC4.47□□□□□ -1.69
USP38Q8NB14 AC105185.1-201ENST00000518705 535 ntBASIC4.47□□□□□ -1.69
USP38Q8NB14 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC4.47□□□□□ -1.69
USP38Q8NB14 AC091516.1-201ENST00000549191 703 ntBASIC4.47□□□□□ -1.69
USP38Q8NB14 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.47□□□□□ -1.69
USP38Q8NB14 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.47□□□□□ -1.69
USP38Q8NB14 MRPS36P5-201ENST00000551909 298 ntBASIC4.47□□□□□ -1.69
USP38Q8NB14 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.47□□□□□ -1.69
USP38Q8NB14 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.47□□□□□ -1.69
USP38Q8NB14 AL592436.1-201ENST00000605135 558 ntBASIC4.47□□□□□ -1.69
USP38Q8NB14 AC243773.3-201ENST00000613270 256 ntBASIC4.47□□□□□ -1.69
USP38Q8NB14 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.47□□□□□ -1.69
USP38Q8NB14 RMST_9.1-201ENST00000619945 193 ntBASIC4.47□□□□□ -1.69
USP38Q8NB14 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.47□□□□□ -1.69
USP38Q8NB14 AC103706.2-201ENST00000638080 240 ntBASIC4.47□□□□□ -1.69
USP38Q8NB14 OR5BE1P-202ENST00000641168 1176 ntBASIC4.47□□□□□ -1.69
USP38Q8NB14 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.47□□□□□ -1.69
USP38Q8NB14 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.47□□□□□ -1.69
USP38Q8NB14 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
USP38Q8NB14 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
USP38Q8NB14 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
USP38Q8NB14 SGO1P2-201ENST00000429458 1589 ntBASIC4.46□□□□□ -1.7
USP38Q8NB14 AL390862.1-201ENST00000635467 1469 ntBASIC4.46□□□□□ -1.7
USP38Q8NB14 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.46□□□□□ -1.7
USP38Q8NB14 Y_RNA.169-201ENST00000363745 96 ntBASIC4.46□□□□□ -1.7
USP38Q8NB14 RNU6-374P-201ENST00000364146 108 ntBASIC4.46□□□□□ -1.7
USP38Q8NB14 SNORA4.1-201ENST00000364263 144 ntBASIC4.46□□□□□ -1.7
USP38Q8NB14 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.46□□□□□ -1.7
USP38Q8NB14 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.46□□□□□ -1.7
USP38Q8NB14 SNORA70E-201ENST00000384492 135 ntBASIC4.46□□□□□ -1.7
USP38Q8NB14 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.46□□□□□ -1.7
USP38Q8NB14 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.46□□□□□ -1.7
USP38Q8NB14 RPS12P23-201ENST00000419579 400 ntBASIC4.46□□□□□ -1.7
USP38Q8NB14 AC234781.2-201ENST00000426370 994 ntBASIC4.46□□□□□ -1.7
USP38Q8NB14 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
USP38Q8NB14 RPS6P15-201ENST00000431996 751 ntBASIC4.46□□□□□ -1.7
USP38Q8NB14 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.46□□□□□ -1.7
USP38Q8NB14 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.46□□□□□ -1.7
USP38Q8NB14 MTND2P20-201ENST00000440805 661 ntBASIC4.46□□□□□ -1.7
USP38Q8NB14 RPS4XP4-201ENST00000443195 763 ntBASIC4.46□□□□□ -1.7
USP38Q8NB14 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC4.46□□□□□ -1.7
USP38Q8NB14 MTCYBP11-201ENST00000447254 1109 ntBASIC4.46□□□□□ -1.7
USP38Q8NB14 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC4.46□□□□□ -1.7
USP38Q8NB14 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.46□□□□□ -1.7
USP38Q8NB14 RAD23BP3-201ENST00000454157 1152 ntBASIC4.46□□□□□ -1.7
USP38Q8NB14 BX510359.1-201ENST00000456973 237 ntBASIC4.46□□□□□ -1.7
USP38Q8NB14 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.46□□□□□ -1.7
USP38Q8NB14 RPS6P4-201ENST00000494693 758 ntBASIC4.46□□□□□ -1.7
USP38Q8NB14 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.46□□□□□ -1.7
USP38Q8NB14 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.46□□□□□ -1.7
USP38Q8NB14 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.46□□□□□ -1.7
USP38Q8NB14 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.46□□□□□ -1.7
USP38Q8NB14 HIGD1AP3-201ENST00000515857 278 ntBASIC4.46□□□□□ -1.7
USP38Q8NB14 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.46□□□□□ -1.7
USP38Q8NB14 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.46□□□□□ -1.7
USP38Q8NB14 AP001636.2-201ENST00000525517 696 ntBASIC4.46□□□□□ -1.7
USP38Q8NB14 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.46□□□□□ -1.7
USP38Q8NB14 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.46□□□□□ -1.7
USP38Q8NB14 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.46□□□□□ -1.7
USP38Q8NB14 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.46□□□□□ -1.7
USP38Q8NB14 AL133457.1-201ENST00000564251 987 ntBASIC4.46□□□□□ -1.7
USP38Q8NB14 LARP7P2-201ENST00000575306 125 ntBASIC4.46□□□□□ -1.7
USP38Q8NB14 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC4.46□□□□□ -1.7
USP38Q8NB14 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
USP38Q8NB14 MIR3922-201ENST00000585192 84 ntBASIC4.46□□□□□ -1.7
USP38Q8NB14 VN1R79P-201ENST00000593540 513 ntBASIC4.46□□□□□ -1.7
USP38Q8NB14 AL031985.2-201ENST00000600955 480 ntBASIC4.46□□□□□ -1.7
USP38Q8NB14 AC115621.1-201ENST00000604653 858 ntBASIC4.46□□□□□ -1.7
USP38Q8NB14 AC069304.2-201ENST00000605154 435 ntBASIC4.46□□□□□ -1.7
USP38Q8NB14 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms