Protein–RNA interactions for Protein: Q8NA47

CCDC63, Coiled-coil domain-containing protein 63, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC63Q8NA47 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC63Q8NA47 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC63Q8NA47 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.67□□□□□ -1.82
CCDC63Q8NA47 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC63Q8NA47 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC63Q8NA47 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC63Q8NA47 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC63Q8NA47 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.67□□□□□ -1.82
CCDC63Q8NA47 AC022662.1-201ENST00000580252 331 ntBASIC3.67□□□□□ -1.82
CCDC63Q8NA47 MIR3939-201ENST00000582614 106 ntBASIC3.67□□□□□ -1.82
CCDC63Q8NA47 KPNA2P3-201ENST00000584190 848 ntBASIC3.67□□□□□ -1.82
CCDC63Q8NA47 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC63Q8NA47 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC63Q8NA47 DUXAP3-201ENST00000603616 594 ntBASIC3.67□□□□□ -1.82
CCDC63Q8NA47 AC069304.2-201ENST00000605154 435 ntBASIC3.67□□□□□ -1.82
CCDC63Q8NA47 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.67□□□□□ -1.82
CCDC63Q8NA47 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
CCDC63Q8NA47 AC112484.5-201ENST00000624189 228 ntBASIC3.67□□□□□ -1.82
CCDC63Q8NA47 AC092184.1-201ENST00000625042 715 ntBASIC3.67□□□□□ -1.82
CCDC63Q8NA47 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC63Q8NA47 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC63Q8NA47 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC63Q8NA47 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC63Q8NA47 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC63Q8NA47 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CCDC63Q8NA47 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC63Q8NA47 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC63Q8NA47 SNORA73.2-201ENST00000364946 201 ntBASIC3.66□□□□□ -1.82
CCDC63Q8NA47 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CCDC63Q8NA47 SKINT1L-201ENST00000401057 817 ntBASIC3.66□□□□□ -1.82
CCDC63Q8NA47 TANK-203ENST00000402568 878 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC63Q8NA47 RPL26P29-201ENST00000415623 438 ntBASIC3.66□□□□□ -1.82
CCDC63Q8NA47 AL050321.1-201ENST00000432363 400 ntBASIC3.66□□□□□ -1.82
CCDC63Q8NA47 Z73417.1-201ENST00000447373 778 ntBASIC3.66□□□□□ -1.82
CCDC63Q8NA47 AC125238.1-201ENST00000448842 249 ntBASIC3.66□□□□□ -1.82
CCDC63Q8NA47 RPL12P26-201ENST00000452430 487 ntBASIC3.66□□□□□ -1.82
CCDC63Q8NA47 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.66□□□□□ -1.82
CCDC63Q8NA47 AC108078.3-201ENST00000502633 489 ntBASIC3.66□□□□□ -1.82
CCDC63Q8NA47 AC021146.8-201ENST00000507455 733 ntBASIC3.66□□□□□ -1.82
CCDC63Q8NA47 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.66□□□□□ -1.82
CCDC63Q8NA47 AC079395.1-201ENST00000510981 262 ntBASIC3.66□□□□□ -1.82
CCDC63Q8NA47 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.66□□□□□ -1.82
CCDC63Q8NA47 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC63Q8NA47 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC63Q8NA47 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC63Q8NA47 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC63Q8NA47 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC63Q8NA47 BNIP3P38-201ENST00000601117 544 ntBASIC3.66□□□□□ -1.82
CCDC63Q8NA47 AC011468.4-201ENST00000603942 409 ntBASIC3.66□□□□□ -1.82
CCDC63Q8NA47 AC112230.1-201ENST00000604342 547 ntBASIC3.66□□□□□ -1.82
CCDC63Q8NA47 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC63Q8NA47 AC124312.4-201ENST00000605533 310 ntBASIC3.66□□□□□ -1.82
CCDC63Q8NA47 AC080013.3-201ENST00000606839 578 ntBASIC3.66□□□□□ -1.82
CCDC63Q8NA47 AL513477.2-201ENST00000607858 568 ntBASIC3.66□□□□□ -1.82
CCDC63Q8NA47 AC007349.4-201ENST00000608114 532 ntBASIC3.66□□□□□ -1.82
CCDC63Q8NA47 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC63Q8NA47 AC092650.2-201ENST00000619984 902 ntBASIC3.66□□□□□ -1.82
CCDC63Q8NA47 AC009318.4-201ENST00000620496 486 ntBASIC3.66□□□□□ -1.82
CCDC63Q8NA47 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC63Q8NA47 MIR6730-201ENST00000622213 67 ntBASIC3.66□□□□□ -1.82
CCDC63Q8NA47 AL732372.2-225ENST00000642124 456 ntBASIC3.66□□□□□ -1.82
CCDC63Q8NA47 AC021755.1-201ENST00000559747 1447 ntBASIC3.66□□□□□ -1.82
CCDC63Q8NA47 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC63Q8NA47 AC024560.2-201ENST00000507981 1497 ntBASIC3.66□□□□□ -1.82
CCDC63Q8NA47 CDR1-202ENST00000625883 1485 ntBASIC3.66□□□□□ -1.82
CCDC63Q8NA47 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC63Q8NA47 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.66□□□□□ -1.82
CCDC63Q8NA47 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
CCDC63Q8NA47 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CCDC63Q8NA47 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.65□□□□□ -1.83
CCDC63Q8NA47 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC63Q8NA47 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC63Q8NA47 RNA5SP42-201ENST00000364278 115 ntBASIC3.65□□□□□ -1.83
CCDC63Q8NA47 RNU6-621P-201ENST00000364752 109 ntBASIC3.65□□□□□ -1.83
CCDC63Q8NA47 RNA5SP189-201ENST00000364920 115 ntBASIC3.65□□□□□ -1.83
CCDC63Q8NA47 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC63Q8NA47 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC63Q8NA47 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC63Q8NA47 RNU6-339P-201ENST00000384310 107 ntBASIC3.65□□□□□ -1.83
CCDC63Q8NA47 RNU6-83P-201ENST00000384568 112 ntBASIC3.65□□□□□ -1.83
CCDC63Q8NA47 AL024474.1-201ENST00000404655 591 ntBASIC3.65□□□□□ -1.83
CCDC63Q8NA47 RNA5SP31-201ENST00000411144 127 ntBASIC3.65□□□□□ -1.83
CCDC63Q8NA47 FNDC3CP-201ENST00000420795 1155 ntBASIC3.65□□□□□ -1.83
CCDC63Q8NA47 GLRXP1-201ENST00000423261 334 ntBASIC3.65□□□□□ -1.83
CCDC63Q8NA47 ATP5F1P1-201ENST00000433775 569 ntBASIC3.65□□□□□ -1.83
CCDC63Q8NA47 SETP5-201ENST00000437270 562 ntBASIC3.65□□□□□ -1.83
CCDC63Q8NA47 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC63Q8NA47 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.65□□□□□ -1.83
CCDC63Q8NA47 MTND2P20-201ENST00000440805 661 ntBASIC3.65□□□□□ -1.83
CCDC63Q8NA47 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.65□□□□□ -1.83
CCDC63Q8NA47 VN1R10P-201ENST00000447106 875 ntBASIC3.65□□□□□ -1.83
CCDC63Q8NA47 ZNF736P8Y-201ENST00000451913 669 ntBASIC3.65□□□□□ -1.83
CCDC63Q8NA47 TRGVB-201ENST00000453257 471 ntBASIC3.65□□□□□ -1.83
CCDC63Q8NA47 snoU13.3-201ENST00000459441 104 ntBASIC3.65□□□□□ -1.83
CCDC63Q8NA47 AC092754.2-201ENST00000463506 460 ntBASIC3.65□□□□□ -1.83
CCDC63Q8NA47 AC092757.1-201ENST00000467293 467 ntBASIC3.65□□□□□ -1.83
CCDC63Q8NA47 RPL31P13-201ENST00000484151 370 ntBASIC3.65□□□□□ -1.83
CCDC63Q8NA47 HMGB1P28-201ENST00000507778 552 ntBASIC3.65□□□□□ -1.83
CCDC63Q8NA47 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC63Q8NA47 AC116353.3-201ENST00000511215 249 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms