Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC33Q8N5R6 AC006548.1-201ENST00000427470 102 ntBASIC4.55□□□□□ -1.68
CCDC33Q8N5R6 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.55□□□□□ -1.68
CCDC33Q8N5R6 RPL23AP25-201ENST00000430973 463 ntBASIC4.55□□□□□ -1.68
CCDC33Q8N5R6 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC33Q8N5R6 SDCBPP1-201ENST00000440192 890 ntBASIC4.55□□□□□ -1.68
CCDC33Q8N5R6 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.55□□□□□ -1.68
CCDC33Q8N5R6 COX6CP2-201ENST00000444980 225 ntBASIC4.55□□□□□ -1.68
CCDC33Q8N5R6 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC33Q8N5R6 MTCO2P18-201ENST00000457151 658 ntBASIC4.55□□□□□ -1.68
CCDC33Q8N5R6 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.55□□□□□ -1.68
CCDC33Q8N5R6 RAP1BP2-201ENST00000478270 544 ntBASIC4.55□□□□□ -1.68
CCDC33Q8N5R6 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC33Q8N5R6 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC33Q8N5R6 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC33Q8N5R6 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC33Q8N5R6 TXNP6-201ENST00000510190 310 ntBASIC4.55□□□□□ -1.68
CCDC33Q8N5R6 PPBPP1-201ENST00000510807 373 ntBASIC4.55□□□□□ -1.68
CCDC33Q8N5R6 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC33Q8N5R6 MIR2116-201ENST00000517221 80 ntBASIC4.55□□□□□ -1.68
CCDC33Q8N5R6 AC008694.2-201ENST00000517591 306 ntBASIC4.55□□□□□ -1.68
CCDC33Q8N5R6 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC33Q8N5R6 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC4.55□□□□□ -1.68
CCDC33Q8N5R6 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC33Q8N5R6 AC013828.2-201ENST00000532487 235 ntBASIC4.55□□□□□ -1.68
CCDC33Q8N5R6 AC024224.1-201ENST00000538284 609 ntBASIC4.55□□□□□ -1.68
CCDC33Q8N5R6 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC33Q8N5R6 AC106785.1-201ENST00000565935 262 ntBASIC4.55□□□□□ -1.68
CCDC33Q8N5R6 U73023.1-201ENST00000603134 700 ntBASIC4.55□□□□□ -1.68
CCDC33Q8N5R6 AC103710.4-201ENST00000609301 899 ntBASIC4.55□□□□□ -1.68
CCDC33Q8N5R6 AC006329.2-201ENST00000611491 394 ntBASIC4.55□□□□□ -1.68
CCDC33Q8N5R6 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC33Q8N5R6 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC33Q8N5R6 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
CCDC33Q8N5R6 AC007546.2-201ENST00000623996 360 ntBASIC4.55□□□□□ -1.68
CCDC33Q8N5R6 CR381572.1-201ENST00000625098 102 ntBASIC4.55□□□□□ -1.68
CCDC33Q8N5R6 MIR3653-201ENST00000625572 110 ntBASIC4.55□□□□□ -1.68
CCDC33Q8N5R6 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC33Q8N5R6 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC33Q8N5R6 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC33Q8N5R6 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
CCDC33Q8N5R6 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC33Q8N5R6 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC33Q8N5R6 AC006971.1-201ENST00000407916 4486 ntBASIC4.55□□□□□ -1.68
CCDC33Q8N5R6 PNPT1P2-201ENST00000456768 2050 ntBASIC4.55□□□□□ -1.68
CCDC33Q8N5R6 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.55□□□□□ -1.68
CCDC33Q8N5R6 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC33Q8N5R6 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC33Q8N5R6 OR11H5P-202ENST00000641612 1325 ntBASIC4.54□□□□□ -1.68
CCDC33Q8N5R6 MFSD8-242ENST00000641690 4199 ntBASIC4.54□□□□□ -1.68
CCDC33Q8N5R6 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC33Q8N5R6 U3.4-201ENST00000363352 213 ntBASIC4.54□□□□□ -1.68
CCDC33Q8N5R6 RNU4-24P-201ENST00000364565 139 ntBASIC4.54□□□□□ -1.68
CCDC33Q8N5R6 RNA5SP366-201ENST00000365454 123 ntBASIC4.54□□□□□ -1.68
CCDC33Q8N5R6 RNU6-769P-201ENST00000384407 104 ntBASIC4.54□□□□□ -1.68
CCDC33Q8N5R6 RNU1-44P-201ENST00000384453 163 ntBASIC4.54□□□□□ -1.68
CCDC33Q8N5R6 RNU6-821P-201ENST00000390995 107 ntBASIC4.54□□□□□ -1.68
CCDC33Q8N5R6 AC097374.1-203ENST00000400783 485 ntBASIC4.54□□□□□ -1.68
CCDC33Q8N5R6 LAP3P1-201ENST00000403648 294 ntBASIC4.54□□□□□ -1.68
CCDC33Q8N5R6 RPL23AP38-201ENST00000423801 469 ntBASIC4.54□□□□□ -1.68
CCDC33Q8N5R6 AC010153.1-201ENST00000432862 727 ntBASIC4.54□□□□□ -1.68
CCDC33Q8N5R6 OR4C10P-201ENST00000434991 931 ntBASIC4.54□□□□□ -1.68
CCDC33Q8N5R6 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC33Q8N5R6 AP000542.1-201ENST00000448473 371 ntBASIC4.54□□□□□ -1.68
CCDC33Q8N5R6 AL645939.1-201ENST00000453429 797 ntBASIC4.54□□□□□ -1.68
CCDC33Q8N5R6 AC010469.1-201ENST00000463864 576 ntBASIC4.54□□□□□ -1.68
CCDC33Q8N5R6 AC053481.1-201ENST00000467217 306 ntBASIC4.54□□□□□ -1.68
CCDC33Q8N5R6 RPL35AP15-201ENST00000468042 339 ntBASIC4.54□□□□□ -1.68
CCDC33Q8N5R6 AC041039.1-201ENST00000485656 536 ntBASIC4.54□□□□□ -1.68
CCDC33Q8N5R6 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC33Q8N5R6 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC33Q8N5R6 AC034159.1-201ENST00000513885 583 ntBASIC4.54□□□□□ -1.68
CCDC33Q8N5R6 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC33Q8N5R6 RNU6-27P-201ENST00000516146 107 ntBASIC4.54□□□□□ -1.68
CCDC33Q8N5R6 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.54□□□□□ -1.68
CCDC33Q8N5R6 AP003730.1-201ENST00000524605 285 ntBASIC4.54□□□□□ -1.68
CCDC33Q8N5R6 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.54□□□□□ -1.68
CCDC33Q8N5R6 AC023161.2-201ENST00000551218 780 ntBASIC4.54□□□□□ -1.68
CCDC33Q8N5R6 AC107954.1-201ENST00000565906 727 ntBASIC4.54□□□□□ -1.68
CCDC33Q8N5R6 AC012414.6-201ENST00000568241 401 ntBASIC4.54□□□□□ -1.68
CCDC33Q8N5R6 AC064872.1-201ENST00000604823 1072 ntBASIC4.54□□□□□ -1.68
CCDC33Q8N5R6 AC011939.3-201ENST00000613686 466 ntBASIC4.54□□□□□ -1.68
CCDC33Q8N5R6 AC139792.2-201ENST00000624218 587 ntBASIC4.54□□□□□ -1.68
CCDC33Q8N5R6 AC091925.2-201ENST00000625059 256 ntBASIC4.54□□□□□ -1.68
CCDC33Q8N5R6 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC33Q8N5R6 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC33Q8N5R6 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC33Q8N5R6 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
CCDC33Q8N5R6 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC33Q8N5R6 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC33Q8N5R6 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC33Q8N5R6 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC33Q8N5R6 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CCDC33Q8N5R6 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC33Q8N5R6 MTND5P3-201ENST00000438536 1800 ntBASIC4.53□□□□□ -1.68
CCDC33Q8N5R6 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC33Q8N5R6 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.53□□□□□ -1.68
CCDC33Q8N5R6 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC33Q8N5R6 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCDC33Q8N5R6 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms