Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 YWHAQP7-201ENST00000603536 658 ntBASIC3.5□□□□□ -1.85
CCDC65Q8IXS2 AL590396.2-201ENST00000636511 1041 ntBASIC3.5□□□□□ -1.85
CCDC65Q8IXS2 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.5□□□□□ -1.85
CCDC65Q8IXS2 FAM157B-203ENST00000639350 358 ntBASIC3.5□□□□□ -1.85
CCDC65Q8IXS2 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CCDC65Q8IXS2 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CCDC65Q8IXS2 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
CCDC65Q8IXS2 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.49□□□□□ -1.85
CCDC65Q8IXS2 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.49□□□□□ -1.85
CCDC65Q8IXS2 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CCDC65Q8IXS2 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CCDC65Q8IXS2 DNAJC19P6-201ENST00000401853 280 ntBASIC3.49□□□□□ -1.85
CCDC65Q8IXS2 RPL5P18-201ENST00000406671 891 ntBASIC3.49□□□□□ -1.85
CCDC65Q8IXS2 AL583834.1-201ENST00000406943 343 ntBASIC3.49□□□□□ -1.85
CCDC65Q8IXS2 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CCDC65Q8IXS2 RNU2-71P-201ENST00000411395 189 ntBASIC3.49□□□□□ -1.85
CCDC65Q8IXS2 AC007899.1-201ENST00000412776 775 ntBASIC3.49□□□□□ -1.85
CCDC65Q8IXS2 RPS15AP40-201ENST00000419621 391 ntBASIC3.49□□□□□ -1.85
CCDC65Q8IXS2 AL158156.1-201ENST00000422509 473 ntBASIC3.49□□□□□ -1.85
CCDC65Q8IXS2 AC241520.1-201ENST00000422654 1099 ntBASIC3.49□□□□□ -1.85
CCDC65Q8IXS2 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC65Q8IXS2 AC108734.1-201ENST00000439549 399 ntBASIC3.49□□□□□ -1.85
CCDC65Q8IXS2 AL358232.1-201ENST00000448030 501 ntBASIC3.49□□□□□ -1.85
CCDC65Q8IXS2 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC65Q8IXS2 RN7SL863P-201ENST00000462370 296 ntBASIC3.49□□□□□ -1.85
CCDC65Q8IXS2 RPL23AP55-201ENST00000498163 452 ntBASIC3.49□□□□□ -1.85
CCDC65Q8IXS2 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC65Q8IXS2 AC121161.1-201ENST00000510606 652 ntBASIC3.49□□□□□ -1.85
CCDC65Q8IXS2 AC068657.1-201ENST00000520807 306 ntBASIC3.49□□□□□ -1.85
CCDC65Q8IXS2 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC65Q8IXS2 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC65Q8IXS2 MIR5680-201ENST00000577577 84 ntBASIC3.49□□□□□ -1.85
CCDC65Q8IXS2 BNIP3P4-201ENST00000604946 565 ntBASIC3.49□□□□□ -1.85
CCDC65Q8IXS2 AL162574.2-201ENST00000614618 657 ntBASIC3.49□□□□□ -1.85
CCDC65Q8IXS2 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.49□□□□□ -1.85
CCDC65Q8IXS2 AF117829.1-206ENST00000621883 3802 ntBASIC3.49□□□□□ -1.85
CCDC65Q8IXS2 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.49□□□□□ -1.85
CCDC65Q8IXS2 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.49□□□□□ -1.85
CCDC65Q8IXS2 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CCDC65Q8IXS2 AC107081.3-201ENST00000612715 2034 ntBASIC3.49□□□□□ -1.85
CCDC65Q8IXS2 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CCDC65Q8IXS2 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.49□□□□□ -1.85
CCDC65Q8IXS2 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
CCDC65Q8IXS2 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CCDC65Q8IXS2 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.48□□□□□ -1.85
CCDC65Q8IXS2 SAGE4P-201ENST00000442271 3381 ntBASIC3.48□□□□□ -1.85
CCDC65Q8IXS2 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CCDC65Q8IXS2 AC046144.1-201ENST00000478559 1853 ntBASIC3.48□□□□□ -1.85
CCDC65Q8IXS2 MTCO1P4-201ENST00000520516 1409 ntBASIC3.48□□□□□ -1.85
CCDC65Q8IXS2 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CCDC65Q8IXS2 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CCDC65Q8IXS2 OR52E6-202ENST00000379946 954 ntBASIC3.48□□□□□ -1.85
CCDC65Q8IXS2 RNVU1-14-201ENST00000384770 164 ntBASIC3.48□□□□□ -1.85
CCDC65Q8IXS2 EIF5P1-201ENST00000400019 1231 ntBASIC3.48□□□□□ -1.85
CCDC65Q8IXS2 RNA5SP120-201ENST00000410900 112 ntBASIC3.48□□□□□ -1.85
CCDC65Q8IXS2 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CCDC65Q8IXS2 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC65Q8IXS2 AL513175.1-201ENST00000431492 780 ntBASIC3.48□□□□□ -1.85
CCDC65Q8IXS2 VDAC1P3-201ENST00000434069 851 ntBASIC3.48□□□□□ -1.85
CCDC65Q8IXS2 AC091862.1-201ENST00000438016 1100 ntBASIC3.48□□□□□ -1.85
CCDC65Q8IXS2 AL591503.2-201ENST00000442314 1005 ntBASIC3.48□□□□□ -1.85
CCDC65Q8IXS2 HMGB3P6-201ENST00000444896 598 ntBASIC3.48□□□□□ -1.85
CCDC65Q8IXS2 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CCDC65Q8IXS2 RPL23AP15-201ENST00000450202 459 ntBASIC3.48□□□□□ -1.85
CCDC65Q8IXS2 SETP6-201ENST00000479329 568 ntBASIC3.48□□□□□ -1.85
CCDC65Q8IXS2 AC068724.1-201ENST00000487100 792 ntBASIC3.48□□□□□ -1.85
CCDC65Q8IXS2 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.48□□□□□ -1.85
CCDC65Q8IXS2 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CCDC65Q8IXS2 AC074250.1-201ENST00000511117 192 ntBASIC3.48□□□□□ -1.85
CCDC65Q8IXS2 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC65Q8IXS2 RN7SKP96-201ENST00000516948 297 ntBASIC3.48□□□□□ -1.85
CCDC65Q8IXS2 SNORA31.26-201ENST00000517250 137 ntBASIC3.48□□□□□ -1.85
CCDC65Q8IXS2 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.48□□□□□ -1.85
CCDC65Q8IXS2 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC65Q8IXS2 AC095057.3-201ENST00000567102 1157 ntBASIC3.48□□□□□ -1.85
CCDC65Q8IXS2 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC65Q8IXS2 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.48□□□□□ -1.85
CCDC65Q8IXS2 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.48□□□□□ -1.85
CCDC65Q8IXS2 AC132825.7-201ENST00000638744 335 ntBASIC3.48□□□□□ -1.85
CCDC65Q8IXS2 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CCDC65Q8IXS2 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.48□□□□□ -1.85
CCDC65Q8IXS2 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.48□□□□□ -1.85
CCDC65Q8IXS2 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CCDC65Q8IXS2 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.48□□□□□ -1.85
CCDC65Q8IXS2 AC093010.3-201ENST00000570269 15214 ntBASIC3.48□□□□□ -1.85
CCDC65Q8IXS2 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.47□□□□□ -1.85
CCDC65Q8IXS2 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC65Q8IXS2 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
CCDC65Q8IXS2 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC65Q8IXS2 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC65Q8IXS2 RNU6-609P-201ENST00000365459 107 ntBASIC3.47□□□□□ -1.85
CCDC65Q8IXS2 MIR23B-201ENST00000384832 97 ntBASIC3.47□□□□□ -1.85
CCDC65Q8IXS2 MIR34B-201ENST00000385076 84 ntBASIC3.47□□□□□ -1.85
CCDC65Q8IXS2 SNORD65C-201ENST00000390962 71 ntBASIC3.47□□□□□ -1.85
CCDC65Q8IXS2 AC008173.1-201ENST00000418901 264 ntBASIC3.47□□□□□ -1.85
CCDC65Q8IXS2 PAICSP7-201ENST00000419829 962 ntBASIC3.47□□□□□ -1.85
CCDC65Q8IXS2 AL353678.1-201ENST00000422735 741 ntBASIC3.47□□□□□ -1.85
CCDC65Q8IXS2 RPS12P18-201ENST00000442381 270 ntBASIC3.47□□□□□ -1.85
CCDC65Q8IXS2 Z77249.1-201ENST00000444622 1175 ntBASIC3.47□□□□□ -1.85
CCDC65Q8IXS2 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms