Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
C9orf40Q8IXQ3 AL049781.1-201ENST00000623195 3585 ntBASIC3.21□□□□□ -1.9
C9orf40Q8IXQ3 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
C9orf40Q8IXQ3 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 DCAF13P1-201ENST00000495256 1330 ntBASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 MTCO1P12-201ENST00000414273 1543 ntBASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 MIR184-201ENST00000384962 84 ntBASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 RPL31P2-201ENST00000413849 377 ntBASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 MTATP6P20-201ENST00000414147 562 ntBASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 AC092634.6-201ENST00000418558 192 ntBASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 BX842559.1-201ENST00000419615 532 ntBASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 MTCO3P1-205ENST00000422088 832 ntBASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 NANOGP5-201ENST00000424456 877 ntBASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 RPL31P54-201ENST00000429803 370 ntBASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 AL159987.2-201ENST00000432754 307 ntBASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 CKS1BP5-201ENST00000434172 273 ntBASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 RPS29P31-201ENST00000446147 164 ntBASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 SNRPGP5-201ENST00000456003 220 ntBASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 SNORD108-201ENST00000459332 71 ntBASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 AC146507.1-201ENST00000468335 354 ntBASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 TRAV31-201ENST00000502780 342 ntBASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 SNORA48.10-201ENST00000516965 160 ntBASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 AP001189.2-201ENST00000527320 189 ntBASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 AP000619.3-201ENST00000535634 1127 ntBASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 MTND1P8-201ENST00000571424 950 ntBASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 BNIP3P38-201ENST00000601117 544 ntBASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 AC103710.3-201ENST00000608157 948 ntBASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 AL450489.1-201ENST00000612071 468 ntBASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 AC012314.7-201ENST00000619693 93 ntBASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 AC006065.5-201ENST00000623427 349 ntBASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 MIR7153-201ENST00000637758 57 ntBASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 LINC02211-204ENST00000642024 1070 ntBASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
C9orf40Q8IXQ3 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 RNA5SP50-201ENST00000363731 107 ntBASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 SUGT1P1-201ENST00000379514 476 ntBASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 MIR7-3-201ENST00000384898 110 ntBASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 AL136116.1-201ENST00000403591 381 ntBASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 RNU4-22P-201ENST00000411058 166 ntBASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 RPS3AP37-201ENST00000419176 745 ntBASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 AC007435.1-201ENST00000421086 415 ntBASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 RPL31P12-201ENST00000422587 358 ntBASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 GTF2IP23-201ENST00000423746 351 ntBASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 AC092648.1-201ENST00000425870 423 ntBASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 USP9YP24-201ENST00000434374 697 ntBASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 NANOGP2-201ENST00000435391 727 ntBASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 USP9YP22-201ENST00000438971 294 ntBASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 USP9YP17-201ENST00000444617 696 ntBASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 AL589880.1-201ENST00000448271 287 ntBASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 ZNF886P-201ENST00000450781 723 ntBASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 CYCSP35-201ENST00000451978 304 ntBASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 PTGES3P5-201ENST00000455109 434 ntBASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 PNPLA4P1-201ENST00000458328 305 ntBASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 AC010468.1-201ENST00000461022 817 ntBASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 AC008155.2-201ENST00000464337 397 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms